RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 TEX101Q9BY14 249 aa10.73□□□□□ -0.69
SMG6-201ENST00000263073 NAGKQ9UJ70 344 aa10.73□□□□□ -0.69
SMG6-201ENST00000263073 PTCRAQ6ISU1 281 aaPredicted RBP10.73□□□□□ -0.69
SMG6-201ENST00000263073 RTL10Q7L3V2 364 aa10.73□□□□□ -0.69
SMG6-201ENST00000263073 BOD1Q96IK1 185 aa10.73□□□□□ -0.69
SMG6-201ENST00000263073 NCBP2LA6PVI3 153 aaKnown RBP10.72□□□□□ -0.69
SMG6-201ENST00000263073 RPL24P83731 157 aaKnown RBP10.72□□□□□ -0.69
SMG6-201ENST00000263073 PRICKLE4Q2TBC4 344 aa10.72□□□□□ -0.69
SMG6-201ENST00000263073 TMEM196Q5HYL7 178 aa10.72□□□□□ -0.69
SMG6-201ENST00000263073 NT5CQ8TCD5 201 aa10.72□□□□□ -0.69
SMG6-201ENST00000263073 MOB3AQ96BX8 217 aa10.72□□□□□ -0.69
SMG6-201ENST00000263073 NDFIP1Q9BT67 221 aa10.72□□□□□ -0.69
SMG6-201ENST00000263073 RNF24Q9Y225 148 aa10.72□□□□□ -0.69
SMG6-201ENST00000263073 PAM16Q9Y3D7 125 aa10.72□□□□□ -0.69
SMG6-201ENST00000263073 ECM29Q5VYK3 1845 aa10.72□□□□□ -0.69
SMG6-201ENST00000263073 CELA2BP08218 269 aaPredicted RBP10.72□□□□□ -0.69
SMG6-201ENST00000263073 SNRPCP09234 159 aaKnown RBP10.72□□□□□ -0.69
SMG6-201ENST00000263073 EFNB2P52799 333 aa10.72□□□□□ -0.69
SMG6-201ENST00000263073 OR5D13Q8NGL4 314 aa10.72□□□□□ -0.69
SMG6-201ENST00000263073 OR1K1Q8NGR3 316 aa10.72□□□□□ -0.69
SMG6-201ENST00000263073 LAMB1P07942 1786 aa10.72□□□□□ -0.69
SMG6-201ENST00000263073 C7orf77A4D0Y5 90 aa10.72□□□□□ -0.69
SMG6-201ENST00000263073 HSPB2A8KAH6 182 aa10.72□□□□□ -0.69
SMG6-201ENST00000263073 M0R2Z0 102 aa10.72□□□□□ -0.69
SMG6-201ENST00000263073 RPL13AP40429 203 aaKnown RBP10.72□□□□□ -0.69
SMG6-201ENST00000263073 SULT1A1P50225 295 aa10.72□□□□□ -0.69
SMG6-201ENST00000263073 COTL1Q14019 142 aa10.72□□□□□ -0.69
SMG6-201ENST00000263073 HSPB2Q16082 182 aa10.72□□□□□ -0.69
SMG6-201ENST00000263073 TOX2Q96NM4 488 aa10.72□□□□□ -0.69
SMG6-201ENST00000263073 EGLN1Q9GZT9 426 aa10.72□□□□□ -0.69
SMG6-201ENST00000263073 TOGARAM1Q9Y4F4 1720 aa10.72□□□□□ -0.69
SMG6-201ENST00000263073 ALG1L2C9J202 215 aa10.72□□□□□ -0.69
SMG6-201ENST00000263073 TOX3O15405 576 aaPredicted RBP10.72□□□□□ -0.69
SMG6-201ENST00000263073 PECRQ9BY49 303 aa10.72□□□□□ -0.69
SMG6-201ENST00000263073 MBD1Q9UIS9 605 aaPredicted RBP10.72□□□□□ -0.69
SMG6-201ENST00000263073 TRBV23-1A0A0A0MS06 115 aa10.72□□□□□ -0.69
SMG6-201ENST00000263073 ZNF785A8K8V0 405 aa10.72□□□□□ -0.69
SMG6-201ENST00000263073 NGFP01138 241 aa10.72□□□□□ -0.69
SMG6-201ENST00000263073 INHBBP09529 407 aa10.72□□□□□ -0.69
SMG6-201ENST00000263073 CCKARP32238 428 aa10.72□□□□□ -0.69
SMG6-201ENST00000263073 TBC1D26Q86UD7 250 aa10.72□□□□□ -0.69
SMG6-201ENST00000263073 ZADH2Q8N4Q0 377 aa10.72□□□□□ -0.69
SMG6-201ENST00000263073 TRAV39A0A0B4J263 110 aa10.71□□□□□ -0.69
SMG6-201ENST00000263073 APELAP0DMC3 54 aa10.71□□□□□ -0.69
SMG6-201ENST00000263073 TMEM65Q6PI78 240 aa10.71□□□□□ -0.69
SMG6-201ENST00000263073 Q6ZS52 159 aa10.71□□□□□ -0.69
SMG6-201ENST00000263073 ELSPBP1Q96BH3 223 aa10.71□□□□□ -0.69
SMG6-201ENST00000263073 LINC00615Q96LM1 132 aaPredicted RBP10.71□□□□□ -0.69
SMG6-201ENST00000263073 ZNF576Q9H609 170 aa10.71□□□□□ -0.69
SMG6-201ENST00000263073 HES4Q9HCC6 221 aa10.71□□□□□ -0.69
SMG6-201ENST00000263073 PROCRQ9UNN8 238 aa10.71□□□□□ -0.69
SMG6-201ENST00000263073 WASHC3Q9Y3C0 194 aa10.71□□□□□ -0.69
SMG6-201ENST00000263073 MAST2Q6P0Q8 1798 aa10.71□□□□□ -0.69
SMG6-201ENST00000263073 TCF21O43680 179 aa10.71□□□□□ -0.69
SMG6-201ENST00000263073 CCL7P80098 99 aa10.71□□□□□ -0.69
SMG6-201ENST00000263073 ZNF683Q8IZ20 524 aa10.71□□□□□ -0.69
SMG6-201ENST00000263073 LYG1Q8N1E2 194 aa10.71□□□□□ -0.69
SMG6-201ENST00000263073 PRSS3P2Q8NHM4 247 aa10.71□□□□□ -0.69
SMG6-201ENST00000263073 M1APQ8TC57 530 aa10.71□□□□□ -0.69
SMG6-201ENST00000263073 MRPL24Q96A35 216 aaKnown RBP10.71□□□□□ -0.69
SMG6-201ENST00000263073 LRRC61Q9BV99 259 aa10.71□□□□□ -0.69
SMG6-201ENST00000263073 ZNF275Q9NSD4 429 aaPredicted RBP10.71□□□□□ -0.69
SMG6-201ENST00000263073 HMSDA8MTL9 139 aa10.71□□□□□ -0.69
SMG6-201ENST00000263073 M0R143 59 aa10.71□□□□□ -0.69
SMG6-201ENST00000263073 ACTL6AO96019 429 aa10.71□□□□□ -0.69
SMG6-201ENST00000263073 ANKRD34CP0C6C1 535 aa10.71□□□□□ -0.69
SMG6-201ENST00000263073 PWWP2BQ6NUJ5 590 aa10.71□□□□□ -0.69
SMG6-201ENST00000263073 TRAT1Q6PIZ9 186 aa10.71□□□□□ -0.69
SMG6-201ENST00000263073 RABEPKQ7Z6M1 372 aa10.71□□□□□ -0.69
SMG6-201ENST00000263073 MRGPRDQ8TDS7 321 aa10.71□□□□□ -0.69
SMG6-201ENST00000263073 POM121L2Q96KW2 1035 aa10.71□□□□□ -0.69
SMG6-201ENST00000263073 TMED3Q9Y3Q3 217 aa10.71□□□□□ -0.69
SMG6-201ENST00000263073 YTHDF2Q9Y5A9 579 aaKnown RBP10.71□□□□□ -0.69
SMG6-201ENST00000263073 NINQ8N4C6 2090 aa10.71□□□□□ -0.69
SMG6-201ENST00000263073 A0A1W2PRD5 423 aa10.71□□□□□ -0.7
SMG6-201ENST00000263073 A0A1W2PRF3 423 aa10.71□□□□□ -0.7
SMG6-201ENST00000263073 A0A1W2PRM7 423 aa10.71□□□□□ -0.7
SMG6-201ENST00000263073 J3KRW8 73 aa10.71□□□□□ -0.7
SMG6-201ENST00000263073 MMP9P14780 707 aa10.71□□□□□ -0.7
SMG6-201ENST00000263073 HTR1DP28221 377 aa10.71□□□□□ -0.7
SMG6-201ENST00000263073 TUSC1Q2TAM9 212 aa10.71□□□□□ -0.7
SMG6-201ENST00000263073 MRPL54Q6P161 138 aaKnown RBP10.71□□□□□ -0.7
SMG6-201ENST00000263073 TMEM140Q9NV12 185 aa10.71□□□□□ -0.7
SMG6-201ENST00000263073 SLC22A20A6NK97 555 aa10.71□□□□□ -0.7
SMG6-201ENST00000263073 OR5H1A6NKK0 313 aa10.71□□□□□ -0.7
SMG6-201ENST00000263073 ORM2P19652 201 aa10.71□□□□□ -0.7
SMG6-201ENST00000263073 GUCA2BQ16661 112 aa10.71□□□□□ -0.7
SMG6-201ENST00000263073 HSD17B13Q7Z5P4 300 aaPredicted RBP10.71□□□□□ -0.7
SMG6-201ENST00000263073 RFLNBQ8N5W9 214 aa10.71□□□□□ -0.7
SMG6-201ENST00000263073 WDR13Q9H1Z4 485 aa10.71□□□□□ -0.7
SMG6-201ENST00000263073 MMP17Q9ULZ9 603 aa10.71□□□□□ -0.7
SMG6-201ENST00000263073 TEX50A0A1B0GTY4 177 aa10.7□□□□□ -0.7
SMG6-201ENST00000263073 POU2F2P09086 479 aa10.7□□□□□ -0.7
SMG6-201ENST00000263073 PNLIPP16233 465 aa10.7□□□□□ -0.7
SMG6-201ENST00000263073 MPPED2Q15777 294 aa10.7□□□□□ -0.7
SMG6-201ENST00000263073 MOB1BQ7L9L4 216 aa10.7□□□□□ -0.7
SMG6-201ENST00000263073 TMEM9BQ9NQ34 198 aa10.7□□□□□ -0.7
SMG6-201ENST00000263073 NRAPQ86VF7 1730 aa10.7□□□□□ -0.7
SMG6-201ENST00000263073 TRAV8-7A0A075B6U6 113 aa10.7□□□□□ -0.7
SMG6-201ENST00000263073 HRKO00198 91 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms