RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 FAM90A10PA6NDY2 464 aa23.71■■□□□ 1.39
CCM2-201ENST00000258781 FAM90A18PA6NE21 464 aa23.71■■□□□ 1.39
CCM2-201ENST00000258781 FAM90A16PA6NEW6 464 aa23.71■■□□□ 1.39
CCM2-201ENST00000258781 FAM90A20PA6NIJ5 464 aa23.71■■□□□ 1.39
CCM2-201ENST00000258781 FAM90A8PA6NJQ4 464 aa23.71■■□□□ 1.39
CCM2-201ENST00000258781 FAM90A7PA6NKC0 464 aa23.71■■□□□ 1.39
CCM2-201ENST00000258781 OR2AT4A6NND4 320 aa23.71■■□□□ 1.39
CCM2-201ENST00000258781 FAM90A22PA8MWA6 464 aa23.71■■□□□ 1.39
CCM2-201ENST00000258781 FAM90A12PA8MX19 464 aa23.71■■□□□ 1.39
CCM2-201ENST00000258781 FAM90A5PA8MXJ8 464 aa23.71■■□□□ 1.39
CCM2-201ENST00000258781 FAM90A23PA8MXZ1 464 aa23.71■■□□□ 1.39
CCM2-201ENST00000258781 GIPP09681 153 aaPredicted RBP23.71■■□□□ 1.39
CCM2-201ENST00000258781 FAM90A15PP0C7V4 464 aa23.71■■□□□ 1.39
CCM2-201ENST00000258781 FAM90A13PP0C7W8 464 aa23.71■■□□□ 1.39
CCM2-201ENST00000258781 FAM90A14PP0C7W9 464 aa23.71■■□□□ 1.39
CCM2-201ENST00000258781 FAM90A24PP0C7X0 464 aa23.71■■□□□ 1.39
CCM2-201ENST00000258781 OR2T2Q6IF00 324 aa23.71■■□□□ 1.39
CCM2-201ENST00000258781 MKXQ8IYA7 352 aa23.71■■□□□ 1.39
CCM2-201ENST00000258781 SHANK1Q9Y566 2161 aa23.71■■□□□ 1.39
CCM2-201ENST00000258781 KALRNO60229 2985 aa23.71■■□□□ 1.39
CCM2-201ENST00000258781 H3BUI4 141 aa23.7■■□□□ 1.39
CCM2-201ENST00000258781 HOXD4P09016 255 aaPredicted RBP23.7■■□□□ 1.39
CCM2-201ENST00000258781 SLC25A42Q86VD7 318 aa23.7■■□□□ 1.39
CCM2-201ENST00000258781 OR10AD1Q8NGE0 317 aa23.7■■□□□ 1.39
CCM2-201ENST00000258781 TERB2Q8NHR7 220 aa23.7■■□□□ 1.39
CCM2-201ENST00000258781 EDARQ9UNE0 448 aa23.7■■□□□ 1.39
CCM2-201ENST00000258781 PRSS44E7EML9 344 aa23.7■■□□□ 1.38
CCM2-201ENST00000258781 RGS13O14921 159 aa23.7■■□□□ 1.38
CCM2-201ENST00000258781 PDCD6O75340 191 aa23.7■■□□□ 1.38
CCM2-201ENST00000258781 IL32P24001 234 aa23.7■■□□□ 1.38
CCM2-201ENST00000258781 TIMP3P35625 211 aa23.7■■□□□ 1.38
CCM2-201ENST00000258781 PMELP40967 661 aa23.7■■□□□ 1.38
CCM2-201ENST00000258781 SPATA46Q5T0L3 261 aa23.7■■□□□ 1.38
CCM2-201ENST00000258781 TMEM17Q86X19 198 aa23.7■■□□□ 1.38
CCM2-201ENST00000258781 OR2AK2Q8NG84 335 aa23.7■■□□□ 1.38
CCM2-201ENST00000258781 FAAP24Q9BTP7 215 aa23.7■■□□□ 1.38
CCM2-201ENST00000258781 PLSCR3Q9NRY6 295 aa23.7■■□□□ 1.38
CCM2-201ENST00000258781 CA10Q9NS85 328 aa23.7■■□□□ 1.38
CCM2-201ENST00000258781 AK3Q9UIJ7 227 aa23.7■■□□□ 1.38
CCM2-201ENST00000258781 NOP16Q9Y3C1 178 aaKnown RBP23.7■■□□□ 1.38
CCM2-201ENST00000258781 BOLA1Q9Y3E2 137 aa23.7■■□□□ 1.38
CCM2-201ENST00000258781 LILRA1O75019 489 aa23.69■■□□□ 1.38
CCM2-201ENST00000258781 OR2A4O95047 310 aa23.69■■□□□ 1.38
CCM2-201ENST00000258781 IL2RAP01589 272 aa23.69■■□□□ 1.38
CCM2-201ENST00000258781 DTYMKP23919 212 aa23.69■■□□□ 1.38
CCM2-201ENST00000258781 OR3A3P47888 321 aa23.69■■□□□ 1.38
CCM2-201ENST00000258781 GNG3P63215 75 aa23.69■■□□□ 1.38
CCM2-201ENST00000258781 NHLRC3Q5JS37 347 aa23.69■■□□□ 1.38
CCM2-201ENST00000258781 FAHD2BQ6P2I3 314 aaPredicted RBP23.69■■□□□ 1.38
CCM2-201ENST00000258781 BHLHA15Q7RTS1 189 aaPredicted RBP23.69■■□□□ 1.38
CCM2-201ENST00000258781 OR5AP2Q8NGF4 316 aa23.69■■□□□ 1.38
CCM2-201ENST00000258781 FAHD2AQ96GK7 314 aa23.69■■□□□ 1.38
CCM2-201ENST00000258781 OR2A7Q96R45 310 aa23.69■■□□□ 1.38
CCM2-201ENST00000258781 ZNF701Q9NV72 531 aaPredicted RBP23.69■■□□□ 1.38
CCM2-201ENST00000258781 ZNF230Q9UIE0 474 aaPredicted RBP23.69■■□□□ 1.38
CCM2-201ENST00000258781 RELNP78509 3460 aa23.69■■□□□ 1.38
CCM2-201ENST00000258781 CEACAM18A8MTB9 384 aa23.68■■□□□ 1.38
CCM2-201ENST00000258781 RAC2P15153 192 aa23.68■■□□□ 1.38
CCM2-201ENST00000258781 NPBWR2P48146 333 aa23.68■■□□□ 1.38
CCM2-201ENST00000258781 UCP2P55851 309 aa23.68■■□□□ 1.38
CCM2-201ENST00000258781 ZNF573Q86YE8 665 aa23.68■■□□□ 1.38
CCM2-201ENST00000258781 SLAMF9Q96A28 289 aa23.68■■□□□ 1.38
CCM2-201ENST00000258781 SULT4A1Q9BR01 284 aa23.68■■□□□ 1.38
CCM2-201ENST00000258781 BCL3P20749 454 aa23.68■■□□□ 1.38
CCM2-201ENST00000258781 RAP2BP61225 183 aa23.68■■□□□ 1.38
CCM2-201ENST00000258781 FGF12P61328 243 aa23.68■■□□□ 1.38
CCM2-201ENST00000258781 CHRFAM7AQ494W8 412 aa23.68■■□□□ 1.38
CCM2-201ENST00000258781 DOLPP1Q86YN1 238 aa23.68■■□□□ 1.38
CCM2-201ENST00000258781 CMSS1Q9BQ75 279 aaKnown RBP23.68■■□□□ 1.38
CCM2-201ENST00000258781 TMEM246Q9BRR3 403 aa23.68■■□□□ 1.38
CCM2-201ENST00000258781 OR2J1Q9GZK6 312 aa23.68■■□□□ 1.38
CCM2-201ENST00000258781 ZNF581Q9P0T4 197 aa23.68■■□□□ 1.38
CCM2-201ENST00000258781 PIPOXQ9P0Z9 390 aa23.68■■□□□ 1.38
CCM2-201ENST00000258781 TINAGQ9UJW2 476 aa23.68■■□□□ 1.38
CCM2-201ENST00000258781 AMDHD2Q9Y303 409 aa23.68■■□□□ 1.38
CCM2-201ENST00000258781 LAMTOR1Q6IAA8 161 aa23.67■■□□□ 1.38
CCM2-201ENST00000258781 FAM169BQ8N8A8 192 aa23.67■■□□□ 1.38
CCM2-201ENST00000258781 OR2T35Q8NGX2 323 aa23.67■■□□□ 1.38
CCM2-201ENST00000258781 RADILQ96JH8 1075 aa23.67■■□□□ 1.38
CCM2-201ENST00000258781 ZNF835Q9Y2P0 537 aa23.67■■□□□ 1.38
CCM2-201ENST00000258781 TRAPPC2LH3BP13 241 aa23.66■■□□□ 1.38
CCM2-201ENST00000258781 ERVH48-1M5A8F1 160 aa23.66■■□□□ 1.38
CCM2-201ENST00000258781 TPD52L2O43399 206 aaKnown RBP23.66■■□□□ 1.38
CCM2-201ENST00000258781 AGFG2O95081 481 aa23.66■■□□□ 1.38
CCM2-201ENST00000258781 IGLV1-44P01699 117 aa23.66■■□□□ 1.38
CCM2-201ENST00000258781 SELEP16581 610 aa23.66■■□□□ 1.38
CCM2-201ENST00000258781 FUT3P21217 361 aa23.66■■□□□ 1.38
CCM2-201ENST00000258781 TUBG1P23258 451 aa23.66■■□□□ 1.38
CCM2-201ENST00000258781 DNASE1P24855 282 aa23.66■■□□□ 1.38
CCM2-201ENST00000258781 TSPAN5P62079 268 aa23.66■■□□□ 1.38
CCM2-201ENST00000258781 DHRS2Q13268 280 aa23.66■■□□□ 1.38
CCM2-201ENST00000258781 MPPED2Q15777 294 aa23.66■■□□□ 1.38
CCM2-201ENST00000258781 UNQ6126/PRO20091Q6UXV3 157 aa23.66■■□□□ 1.38
CCM2-201ENST00000258781 C9orf62Q8N4C0 152 aa23.66■■□□□ 1.38
CCM2-201ENST00000258781 C12orf45Q8N5I9 185 aaPredicted RBP23.66■■□□□ 1.38
CCM2-201ENST00000258781 OR1J1Q8NGS3 322 aa23.66■■□□□ 1.38
CCM2-201ENST00000258781 SLC25A40Q8TBP6 338 aa23.66■■□□□ 1.38
CCM2-201ENST00000258781 MAFIPQ8WZ33 124 aa23.66■■□□□ 1.38
CCM2-201ENST00000258781 HDHD3Q9BSH5 251 aaPredicted RBP23.66■■□□□ 1.38
CCM2-201ENST00000258781 PKIBQ9C010 78 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 157.1 ms