RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 CT62P0C5K7 136 aa16.46■□□□□ 0.23
SCARB2-213ENST00000638680 CTLA4P16410 223 aa16.46■□□□□ 0.23
SCARB2-213ENST00000638680 GNG3P63215 75 aa16.46■□□□□ 0.23
SCARB2-213ENST00000638680 TMEM215Q68D42 235 aa16.46■□□□□ 0.23
SCARB2-213ENST00000638680 SARAFQ96BY9 339 aa16.46■□□□□ 0.23
SCARB2-213ENST00000638680 TRAV34A0A0B4J273 112 aa16.46■□□□□ 0.22
SCARB2-213ENST00000638680 OGG1O15527 345 aa16.46■□□□□ 0.22
SCARB2-213ENST00000638680 FBP1P09467 338 aa16.46■□□□□ 0.22
SCARB2-213ENST00000638680 SPINK9Q5DT21 86 aa16.46■□□□□ 0.22
SCARB2-213ENST00000638680 TRGV10A0A0A0MS01 117 aa16.45■□□□□ 0.22
SCARB2-213ENST00000638680 FCN1O00602 326 aa16.45■□□□□ 0.22
SCARB2-213ENST00000638680 PLPP3O14495 311 aa16.45■□□□□ 0.22
SCARB2-213ENST00000638680 HPXP02790 462 aa16.45■□□□□ 0.22
SCARB2-213ENST00000638680 DHRS7BQ6IAN0 325 aaPredicted RBP16.45■□□□□ 0.22
SCARB2-213ENST00000638680 OR10AD1Q8NGE0 317 aa16.45■□□□□ 0.22
SCARB2-213ENST00000638680 PECRQ9BY49 303 aa16.45■□□□□ 0.22
SCARB2-213ENST00000638680 CCL7P80098 99 aa16.45■□□□□ 0.22
SCARB2-213ENST00000638680 WIPI1Q5MNZ9 446 aaPredicted RBP16.45■□□□□ 0.22
SCARB2-213ENST00000638680 RGS7BPQ6MZT1 257 aaPredicted RBP16.45■□□□□ 0.22
SCARB2-213ENST00000638680 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.45■□□□□ 0.22
SCARB2-213ENST00000638680 IL22RA2Q969J5 263 aa16.45■□□□□ 0.22
SCARB2-213ENST00000638680 NGFP01138 241 aa16.45■□□□□ 0.22
SCARB2-213ENST00000638680 PAX5Q02548 391 aa16.45■□□□□ 0.22
SCARB2-213ENST00000638680 FAM78BQ5VT40 261 aa16.45■□□□□ 0.22
SCARB2-213ENST00000638680 OR2A5Q96R48 311 aa16.45■□□□□ 0.22
SCARB2-213ENST00000638680 SARGQ9BW04 601 aa16.45■□□□□ 0.22
SCARB2-213ENST00000638680 TOX3O15405 576 aaPredicted RBP16.45■□□□□ 0.22
SCARB2-213ENST00000638680 MRGPRX3Q96LB0 322 aa16.45■□□□□ 0.22
SCARB2-213ENST00000638680 MS4A7Q9GZW8 240 aaPredicted RBP16.45■□□□□ 0.22
SCARB2-213ENST00000638680 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.45■□□□□ 0.22
SCARB2-213ENST00000638680 TAAR3PQ9P1P4 343 aa16.45■□□□□ 0.22
SCARB2-213ENST00000638680 POMT1Q9Y6A1 747 aa16.45■□□□□ 0.22
SCARB2-213ENST00000638680 MTCH2Q9Y6C9 303 aa16.45■□□□□ 0.22
SCARB2-213ENST00000638680 DAOP14920 347 aa16.44■□□□□ 0.22
SCARB2-213ENST00000638680 CLEC18BQ6UXF7 455 aa16.44■□□□□ 0.22
SCARB2-213ENST00000638680 BCORQ6W2J9 1755 aa16.44■□□□□ 0.22
SCARB2-213ENST00000638680 FCGR3BO75015 233 aa16.44■□□□□ 0.22
SCARB2-213ENST00000638680 GNG4P50150 75 aa16.44■□□□□ 0.22
SCARB2-213ENST00000638680 ZNF141Q15928 474 aa16.44■□□□□ 0.22
SCARB2-213ENST00000638680 ZNF79Q15937 498 aa16.44■□□□□ 0.22
SCARB2-213ENST00000638680 LYRM2Q9NU23 88 aaPredicted RBP16.44■□□□□ 0.22
SCARB2-213ENST00000638680 FRRS1LQ9P0K9 344 aa16.44■□□□□ 0.22
SCARB2-213ENST00000638680 OR5H15A6NDH6 313 aa16.44■□□□□ 0.22
SCARB2-213ENST00000638680 LINC01565O15544 149 aa16.44■□□□□ 0.22
SCARB2-213ENST00000638680 DYNLT3P51808 116 aa16.44■□□□□ 0.22
SCARB2-213ENST00000638680 RPEL1Q2QD12 228 aa16.44■□□□□ 0.22
SCARB2-213ENST00000638680 STUMQ69YW2 141 aa16.44■□□□□ 0.22
SCARB2-213ENST00000638680 FAHD2BQ6P2I3 314 aaPredicted RBP16.44■□□□□ 0.22
SCARB2-213ENST00000638680 FAHD2AQ96GK7 314 aa16.44■□□□□ 0.22
SCARB2-213ENST00000638680 HES4Q9HCC6 221 aa16.44■□□□□ 0.22
SCARB2-213ENST00000638680 LIPGQ9Y5X9 500 aa16.44■□□□□ 0.22
SCARB2-213ENST00000638680 LINC00862A6NCI5 91 aa16.44■□□□□ 0.22
SCARB2-213ENST00000638680 IRF3Q14653 427 aa16.44■□□□□ 0.22
SCARB2-213ENST00000638680 JMJD6Q6NYC1 403 aaPredicted RBP16.44■□□□□ 0.22
SCARB2-213ENST00000638680 Q8IYB0 196 aa16.44■□□□□ 0.22
SCARB2-213ENST00000638680 ALG14Q96F25 216 aa16.44■□□□□ 0.22
SCARB2-213ENST00000638680 OR10G4Q8NGN3 311 aa16.44■□□□□ 0.22
SCARB2-213ENST00000638680 OR10G9Q8NGN4 311 aa16.44■□□□□ 0.22
SCARB2-213ENST00000638680 OR10G7Q8NGN6 311 aa16.44■□□□□ 0.22
SCARB2-213ENST00000638680 UBE2ZQ9H832 354 aaPredicted RBP16.44■□□□□ 0.22
SCARB2-213ENST00000638680 OCIAD1Q9NX40 245 aa16.44■□□□□ 0.22
SCARB2-213ENST00000638680 CA6P23280 308 aa16.43■□□□□ 0.22
SCARB2-213ENST00000638680 IGSF11Q5DX21 431 aa16.43■□□□□ 0.22
SCARB2-213ENST00000638680 CBLN3Q6UW01 205 aa16.43■□□□□ 0.22
SCARB2-213ENST00000638680 NUBPLQ8TB37 319 aa16.43■□□□□ 0.22
SCARB2-213ENST00000638680 CST2P09228 141 aa16.43■□□□□ 0.22
SCARB2-213ENST00000638680 MOB1BQ7L9L4 216 aa16.43■□□□□ 0.22
SCARB2-213ENST00000638680 C10orf111Q8N326 155 aa16.43■□□□□ 0.22
SCARB2-213ENST00000638680 GNRHR2Q96P88 292 aa16.43■□□□□ 0.22
SCARB2-213ENST00000638680 PHF7Q9BWX1 381 aaPredicted RBP16.43■□□□□ 0.22
SCARB2-213ENST00000638680 MFRPQ9BY79 579 aa16.43■□□□□ 0.22
SCARB2-213ENST00000638680 GPR3P46089 330 aa16.43■□□□□ 0.22
SCARB2-213ENST00000638680 POLR2GP62487 172 aaKnown RBP eCLIP16.43■□□□□ 0.22
SCARB2-213ENST00000638680 IP6K3Q96PC2 410 aa16.43■□□□□ 0.22
SCARB2-213ENST00000638680 ZMIZ1Q9ULJ6 1067 aa16.43■□□□□ 0.22
SCARB2-213ENST00000638680 MYO9BQ13459 2157 aa16.43■□□□□ 0.22
SCARB2-213ENST00000638680 MEX3AA1L020 520 aaKnown RBP16.43■□□□□ 0.22
SCARB2-213ENST00000638680 PRRG2O14669 202 aa16.43■□□□□ 0.22
SCARB2-213ENST00000638680 SPRY3O43610 288 aa16.43■□□□□ 0.22
SCARB2-213ENST00000638680 CDC34P49427 236 aaPredicted RBP16.43■□□□□ 0.22
SCARB2-213ENST00000638680 STPG2Q8N412 459 aa16.43■□□□□ 0.22
SCARB2-213ENST00000638680 SEC11CQ9BY50 192 aa16.43■□□□□ 0.22
SCARB2-213ENST00000638680 PDCD6O75340 191 aa16.43■□□□□ 0.22
SCARB2-213ENST00000638680 CRHP06850 196 aa16.43■□□□□ 0.22
SCARB2-213ENST00000638680 KLF9Q13886 244 aaPredicted RBP16.43■□□□□ 0.22
SCARB2-213ENST00000638680 OPN4Q9UHM6 478 aa16.43■□□□□ 0.22
SCARB2-213ENST00000638680 PSG11Q9UQ72 335 aa16.43■□□□□ 0.22
SCARB2-213ENST00000638680 LMO7DNF2Z398 122 aa16.42■□□□□ 0.22
SCARB2-213ENST00000638680 RPS4XP62701 263 aaKnown RBP16.42■□□□□ 0.22
SCARB2-213ENST00000638680 ZNF770Q6IQ21 691 aaPredicted RBP16.42■□□□□ 0.22
SCARB2-213ENST00000638680 MSL2Q9HCI7 577 aa16.42■□□□□ 0.22
SCARB2-213ENST00000638680 GON4LQ3T8J9 2241 aa16.42■□□□□ 0.22
SCARB2-213ENST00000638680 ZNF32P17041 273 aa16.42■□□□□ 0.22
SCARB2-213ENST00000638680 ETFRF1Q6IPR1 90 aa16.42■□□□□ 0.22
SCARB2-213ENST00000638680 C19orf35Q6ZS72 473 aa16.42■□□□□ 0.22
SCARB2-213ENST00000638680 ZNF547Q8IVP9 402 aa16.42■□□□□ 0.22
SCARB2-213ENST00000638680 GABRG2P18507 467 aa16.42■□□□□ 0.22
SCARB2-213ENST00000638680 GNG10P50151 68 aa16.42■□□□□ 0.22
SCARB2-213ENST00000638680 ZIC1Q15915 447 aa16.42■□□□□ 0.22
SCARB2-213ENST00000638680 VN1R4Q7Z5H5 301 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms