RNA–Protein interactions for RNA: ENST00000629667.2

PDLIM3-213, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 1,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-213ENST00000629667 CYP2R1Q6VVX0 501 aa12.53□□□□□ -0.4
PDLIM3-213ENST00000629667 GDPD3Q7L5L3 318 aa12.53□□□□□ -0.4
PDLIM3-213ENST00000629667 OR4X2Q8NGF9 303 aa12.53□□□□□ -0.4
PDLIM3-213ENST00000629667 NDNFQ8TB73 568 aa12.53□□□□□ -0.4
PDLIM3-213ENST00000629667 OR51E1Q8TCB6 317 aa12.53□□□□□ -0.4
PDLIM3-213ENST00000629667 CAPSLQ8WWF8 208 aa12.53□□□□□ -0.4
PDLIM3-213ENST00000629667 AKR1E2Q96JD6 320 aa12.53□□□□□ -0.4
PDLIM3-213ENST00000629667 NIPSNAP1Q9BPW8 284 aa12.53□□□□□ -0.4
PDLIM3-213ENST00000629667 NRIP2Q9BQI9 281 aa12.53□□□□□ -0.4
PDLIM3-213ENST00000629667 INPP5EQ9NRR6 644 aa12.53□□□□□ -0.4
PDLIM3-213ENST00000629667 FAM206AQ9NX38 181 aa12.53□□□□□ -0.4
PDLIM3-213ENST00000629667 MINOS1-NBL1R4GNA1 71 aa12.53□□□□□ -0.4
PDLIM3-213ENST00000629667 PSMD9O00233 223 aa12.52□□□□□ -0.41
PDLIM3-213ENST00000629667 PRODHO43272 600 aa12.52□□□□□ -0.41
PDLIM3-213ENST00000629667 ALOX5APP20292 161 aa12.52□□□□□ -0.41
PDLIM3-213ENST00000629667 ACTA2P62736 377 aa12.52□□□□□ -0.41
PDLIM3-213ENST00000629667 ACTG2P63267 376 aa12.52□□□□□ -0.41
PDLIM3-213ENST00000629667 ACTC1P68032 377 aa12.52□□□□□ -0.41
PDLIM3-213ENST00000629667 ACTA1P68133 377 aa12.52□□□□□ -0.41
PDLIM3-213ENST00000629667 COL10A1Q03692 680 aa12.52□□□□□ -0.41
PDLIM3-213ENST00000629667 LCN1P1Q5VSP4 162 aa12.52□□□□□ -0.41
PDLIM3-213ENST00000629667 KCTD18Q6PI47 426 aaPredicted RBP12.52□□□□□ -0.41
PDLIM3-213ENST00000629667 C16orf82Q7Z2V1 217 aa12.52□□□□□ -0.41
PDLIM3-213ENST00000629667 ZNF714Q96N38 554 aa12.52□□□□□ -0.41
PDLIM3-213ENST00000629667 MROQ9BYG7 248 aa12.52□□□□□ -0.41
PDLIM3-213ENST00000629667 GPR61Q9BZJ8 451 aa12.52□□□□□ -0.41
PDLIM3-213ENST00000629667 PBOV1Q9GZY1 135 aa12.52□□□□□ -0.41
PDLIM3-213ENST00000629667 VNN3Q9NY84 501 aa12.52□□□□□ -0.41
PDLIM3-213ENST00000629667 SLC22A13Q9Y226 551 aa12.52□□□□□ -0.41
PDLIM3-213ENST00000629667 FAM90A22PA8MWA6 464 aa12.51□□□□□ -0.41
PDLIM3-213ENST00000629667 DHRS3O75911 302 aa12.51□□□□□ -0.41
PDLIM3-213ENST00000629667 DNAJC8O75937 253 aaPredicted RBP12.51□□□□□ -0.41
PDLIM3-213ENST00000629667 HCCSP53701 268 aa12.51□□□□□ -0.41
PDLIM3-213ENST00000629667 RPS7P62081 194 aaKnown RBP12.51□□□□□ -0.41
PDLIM3-213ENST00000629667 IL18R1Q13478 541 aa12.51□□□□□ -0.41
PDLIM3-213ENST00000629667 OR2T5Q6IEZ7 315 aa12.51□□□□□ -0.41
PDLIM3-213ENST00000629667 DEGS2Q6QHC5 323 aa12.51□□□□□ -0.41
PDLIM3-213ENST00000629667 CD300LDQ6UXZ3 194 aa12.51□□□□□ -0.41
PDLIM3-213ENST00000629667 ASRGL1Q7L266 308 aa12.51□□□□□ -0.41
PDLIM3-213ENST00000629667 PIGWQ7Z7B1 504 aa12.51□□□□□ -0.41
PDLIM3-213ENST00000629667 ZNF676Q8N7Q3 588 aa12.51□□□□□ -0.41
PDLIM3-213ENST00000629667 OR10G2Q8NGC3 310 aa12.51□□□□□ -0.41
PDLIM3-213ENST00000629667 OR2T29Q8NH02 315 aa12.51□□□□□ -0.41
PDLIM3-213ENST00000629667 TEAD3Q99594 435 aa12.51□□□□□ -0.41
PDLIM3-213ENST00000629667 ELAC2Q9BQ52 826 aaKnown RBP12.51□□□□□ -0.41
PDLIM3-213ENST00000629667 HES4Q9HCC6 221 aa12.51□□□□□ -0.41
PDLIM3-213ENST00000629667 GPR173Q9NS66 373 aa12.51□□□□□ -0.41
PDLIM3-213ENST00000629667 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.51□□□□□ -0.41
PDLIM3-213ENST00000629667 IGLV3-1P01715 115 aa12.5□□□□□ -0.41
PDLIM3-213ENST00000629667 LPLP06858 475 aa12.5□□□□□ -0.41
PDLIM3-213ENST00000629667 CHRM2P08172 466 aa12.5□□□□□ -0.41
PDLIM3-213ENST00000629667 ESRRGP62508 458 aa12.5□□□□□ -0.41
PDLIM3-213ENST00000629667 DCTN2Q13561 401 aaKnown RBP12.5□□□□□ -0.41
PDLIM3-213ENST00000629667 ABCA11PQ4W5N1 156 aa12.5□□□□□ -0.41
PDLIM3-213ENST00000629667 SLC35D3Q5M8T2 416 aa12.5□□□□□ -0.41
PDLIM3-213ENST00000629667 CLVS2Q5SYC1 327 aa12.5□□□□□ -0.41
PDLIM3-213ENST00000629667 CPOQ8IVL8 374 aa12.5□□□□□ -0.41
PDLIM3-213ENST00000629667 STMN2Q93045 179 aa12.5□□□□□ -0.41
PDLIM3-213ENST00000629667 LIN7BQ9HAP6 207 aa12.5□□□□□ -0.41
PDLIM3-213ENST00000629667 IGHV2-26A0A0B4J1V2 119 aa12.49□□□□□ -0.41
PDLIM3-213ENST00000629667 hADV38S2A0JD32 116 aa12.49□□□□□ -0.41
PDLIM3-213ENST00000629667 PQLC2LA1A4F0 135 aa12.49□□□□□ -0.41
PDLIM3-213ENST00000629667 DLGAP1O14490 977 aa12.49□□□□□ -0.41
PDLIM3-213ENST00000629667 ATP6V1B2P21281 511 aa12.49□□□□□ -0.41
PDLIM3-213ENST00000629667 CD24P25063 80 aa12.49□□□□□ -0.41
PDLIM3-213ENST00000629667 HTR1DP28221 377 aa12.49□□□□□ -0.41
PDLIM3-213ENST00000629667 CBX1P83916 185 aa12.49□□□□□ -0.41
PDLIM3-213ENST00000629667 MEF2CQ06413 473 aaPredicted RBP12.49□□□□□ -0.41
PDLIM3-213ENST00000629667 EDDM3AQ14507 147 aa12.49□□□□□ -0.41
PDLIM3-213ENST00000629667 GINS1Q14691 196 aa12.49□□□□□ -0.41
PDLIM3-213ENST00000629667 ZNF829Q3KNS6 432 aaPredicted RBP12.49□□□□□ -0.41
PDLIM3-213ENST00000629667 SPATS1Q496A3 300 aa12.49□□□□□ -0.41
PDLIM3-213ENST00000629667 C16orf89Q6UX73 402 aa12.49□□□□□ -0.41
PDLIM3-213ENST00000629667 ZBTB49Q6ZSB9 765 aa12.49□□□□□ -0.41
PDLIM3-213ENST00000629667 DEFB107AQ8IZN7 70 aa12.49□□□□□ -0.41
PDLIM3-213ENST00000629667 OR8H2Q8N162 312 aa12.49□□□□□ -0.41
PDLIM3-213ENST00000629667 LINC00482Q8N8I6 264 aa12.49□□□□□ -0.41
PDLIM3-213ENST00000629667 FEVQ99581 238 aa12.49□□□□□ -0.41
PDLIM3-213ENST00000629667 CHID1Q9BWS9 393 aa12.49□□□□□ -0.41
PDLIM3-213ENST00000629667 CLEC7AQ9BXN2 247 aa12.49□□□□□ -0.41
PDLIM3-213ENST00000629667 YIPF3Q9GZM5 350 aa12.49□□□□□ -0.41
PDLIM3-213ENST00000629667 MAGIXQ9H6Y5 334 aa12.49□□□□□ -0.41
PDLIM3-213ENST00000629667 ACTR3BQ9P1U1 418 aa12.49□□□□□ -0.41
PDLIM3-213ENST00000629667 NUFIP1Q9UHK0 495 aaKnown RBP12.49□□□□□ -0.41
PDLIM3-213ENST00000629667 GTF2A1LQ9UNN4 478 aa12.49□□□□□ -0.41
PDLIM3-213ENST00000629667 SESN1Q9Y6P5 492 aa12.49□□□□□ -0.41
PDLIM3-213ENST00000629667 ZNF737O75373 536 aa12.48□□□□□ -0.41
PDLIM3-213ENST00000629667 ZNF254O75437 659 aa12.48□□□□□ -0.41
PDLIM3-213ENST00000629667 HMGN1P05114 100 aa12.48□□□□□ -0.41
PDLIM3-213ENST00000629667 MPZP25189 248 aa12.48□□□□□ -0.41
PDLIM3-213ENST00000629667 BRS3P32247 399 aa12.48□□□□□ -0.41
PDLIM3-213ENST00000629667 RIDAP52758 137 aaKnown RBP12.48□□□□□ -0.41
PDLIM3-213ENST00000629667 ERVK11-1P61568 191 aa12.48□□□□□ -0.41
PDLIM3-213ENST00000629667 TMEM42Q69YG0 159 aa12.48□□□□□ -0.41
PDLIM3-213ENST00000629667 C10orf99Q6UWK7 81 aa12.48□□□□□ -0.41
PDLIM3-213ENST00000629667 TCF23Q7RTU1 214 aa12.48□□□□□ -0.41
PDLIM3-213ENST00000629667 ANGPTL5Q86XS5 388 aa12.48□□□□□ -0.41
PDLIM3-213ENST00000629667 ZNF679Q8IYX0 411 aa12.48□□□□□ -0.41
PDLIM3-213ENST00000629667 BBS1Q8NFJ9 593 aa12.48□□□□□ -0.41
PDLIM3-213ENST00000629667 OR51D1Q8NGF3 324 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms