RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 CENPXA8MT69 81 aa6.49□□□□□ -1.37
CLK1-215ENST00000621181 C22orf46C9J442 243 aa6.49□□□□□ -1.37
CLK1-215ENST00000621181 E9PI62 339 aa6.49□□□□□ -1.37
CLK1-215ENST00000621181 P2RY10O00398 339 aa6.49□□□□□ -1.37
CLK1-215ENST00000621181 XKRYO14609 159 aa6.49□□□□□ -1.37
CLK1-215ENST00000621181 TNFRSF13BO14836 293 aaPredicted RBP6.49□□□□□ -1.37
CLK1-215ENST00000621181 GPR137BO60478 399 aa6.49□□□□□ -1.37
CLK1-215ENST00000621181 ALX3O95076 343 aa6.49□□□□□ -1.37
CLK1-215ENST00000621181 FSTL3O95633 263 aa6.49□□□□□ -1.37
CLK1-215ENST00000621181 LIPFP07098 398 aa6.49□□□□□ -1.37
CLK1-215ENST00000621181 DBHP09172 617 aa6.49□□□□□ -1.37
CLK1-215ENST00000621181 ELK1P19419 428 aa6.49□□□□□ -1.37
CLK1-215ENST00000621181 RPL4P36578 427 aaKnown RBP6.49□□□□□ -1.37
CLK1-215ENST00000621181 CFHR2P36980 270 aa6.49□□□□□ -1.37
CLK1-215ENST00000621181 NPY4RP50391 375 aa6.49□□□□□ -1.37
CLK1-215ENST00000621181 GALEQ14376 348 aa6.49□□□□□ -1.37
CLK1-215ENST00000621181 ZFP69Q49AA0 526 aa6.49□□□□□ -1.37
CLK1-215ENST00000621181 FBLN7Q53RD9 439 aa6.49□□□□□ -1.37
CLK1-215ENST00000621181 METTL11BQ5VVY1 283 aa6.49□□□□□ -1.37
CLK1-215ENST00000621181 PLBD1Q6P4A8 553 aa6.49□□□□□ -1.37
CLK1-215ENST00000621181 LYPD2Q6UXB3 125 aa6.49□□□□□ -1.37
CLK1-215ENST00000621181 FBXW12Q6X9E4 464 aa6.49□□□□□ -1.37
CLK1-215ENST00000621181 RRM2BQ7LG56 351 aa6.49□□□□□ -1.37
CLK1-215ENST00000621181 NOXA1Q86UR1 476 aa6.49□□□□□ -1.37
CLK1-215ENST00000621181 Q8N402 240 aa6.49□□□□□ -1.37
CLK1-215ENST00000621181 SCCPDHQ8NBX0 429 aa6.49□□□□□ -1.37
CLK1-215ENST00000621181 C19orf18Q8NEA5 215 aa6.49□□□□□ -1.37
CLK1-215ENST00000621181 ACOT12Q8WYK0 555 aa6.49□□□□□ -1.37
CLK1-215ENST00000621181 TRIM63Q969Q1 353 aa6.49□□□□□ -1.37
CLK1-215ENST00000621181 DMRTB1Q96MA1 342 aa6.49□□□□□ -1.37
CLK1-215ENST00000621181 FYTTD1Q96QD9 318 aaKnown RBP6.49□□□□□ -1.37
CLK1-215ENST00000621181 MED20Q9H944 212 aa6.49□□□□□ -1.37
CLK1-215ENST00000621181 RANGRFQ9HD47 186 aaPredicted RBP6.49□□□□□ -1.37
CLK1-215ENST00000621181 CMC2Q9NRP2 79 aa6.49□□□□□ -1.37
CLK1-215ENST00000621181 INPP5EQ9NRR6 644 aa6.49□□□□□ -1.37
CLK1-215ENST00000621181 HAO2Q9NYQ3 351 aa6.49□□□□□ -1.37
CLK1-215ENST00000621181 GRHPRQ9UBQ7 328 aa6.49□□□□□ -1.37
CLK1-215ENST00000621181 POLR1DQ9Y2S0 133 aa6.49□□□□□ -1.37
CLK1-215ENST00000621181 CENPVL3A0A0U1RRI6 287 aa6.48□□□□□ -1.37
CLK1-215ENST00000621181 ZNF879B4DU55 563 aa6.48□□□□□ -1.37
CLK1-215ENST00000621181 RER1O15258 196 aa6.48□□□□□ -1.37
CLK1-215ENST00000621181 MLNRO43193 412 aa6.48□□□□□ -1.37
CLK1-215ENST00000621181 IGHV4-59P01825 116 aa6.48□□□□□ -1.37
CLK1-215ENST00000621181 SLC2A2P11168 524 aaPredicted RBP6.48□□□□□ -1.37
CLK1-215ENST00000621181 PROK1P58294 105 aa6.48□□□□□ -1.37
CLK1-215ENST00000621181 ZNF85Q03923 595 aa6.48□□□□□ -1.37
CLK1-215ENST00000621181 PLA1AQ53H76 456 aa6.48□□□□□ -1.37
CLK1-215ENST00000621181 OTPQ5XKR4 325 aa6.48□□□□□ -1.37
CLK1-215ENST00000621181 CD276Q5ZPR3 534 aa6.48□□□□□ -1.37
CLK1-215ENST00000621181 DMKNQ6E0U4 476 aaPredicted RBP6.48□□□□□ -1.37
CLK1-215ENST00000621181 PNLDC1Q8NA58 520 aaKnown RBP6.48□□□□□ -1.37
CLK1-215ENST00000621181 SLC37A3Q8NCC5 494 aa6.48□□□□□ -1.37
CLK1-215ENST00000621181 OR51G2Q8NGK0 314 aa6.48□□□□□ -1.37
CLK1-215ENST00000621181 OR11L1Q8NGX0 322 aa6.48□□□□□ -1.37
CLK1-215ENST00000621181 OR1F12Q8NHA8 337 aa6.48□□□□□ -1.37
CLK1-215ENST00000621181 FANK1Q8TC84 345 aa6.48□□□□□ -1.37
CLK1-215ENST00000621181 APOBEC3DQ96AK3 386 aaPredicted RBP6.48□□□□□ -1.37
CLK1-215ENST00000621181 PGLYRP3Q96LB9 341 aa6.48□□□□□ -1.37
CLK1-215ENST00000621181 TEAD3Q99594 435 aa6.48□□□□□ -1.37
CLK1-215ENST00000621181 ALG8Q9BVK2 526 aa6.48□□□□□ -1.37
CLK1-215ENST00000621181 TEX12Q9BXU0 123 aa6.48□□□□□ -1.37
CLK1-215ENST00000621181 ZCCHC4Q9H5U6 513 aa6.48□□□□□ -1.37
CLK1-215ENST00000621181 WDR76Q9H967 626 aa6.48□□□□□ -1.37
CLK1-215ENST00000621181 ADGRL4Q9HBW9 690 aa6.48□□□□□ -1.37
CLK1-215ENST00000621181 PLSCR3Q9NRY6 295 aa6.48□□□□□ -1.37
CLK1-215ENST00000621181 UFSP2Q9NUQ7 469 aa6.48□□□□□ -1.37
CLK1-215ENST00000621181 TMEM100Q9NV29 134 aa6.48□□□□□ -1.37
CLK1-215ENST00000621181 ADAM18Q9Y3Q7 739 aa6.48□□□□□ -1.37
CLK1-215ENST00000621181 ALG5Q9Y673 324 aa6.48□□□□□ -1.37
CLK1-215ENST00000621181 TEX13CA0A0J9YWL9 993 aa6.48□□□□□ -1.37
CLK1-215ENST00000621181 BTBD17A6NE02 478 aa6.48□□□□□ -1.37
CLK1-215ENST00000621181 OR6C6A6NF89 314 aa6.48□□□□□ -1.37
CLK1-215ENST00000621181 IQCF6A8MYZ5 107 aa6.48□□□□□ -1.37
CLK1-215ENST00000621181 LYRM1O43325 122 aa6.48□□□□□ -1.37
CLK1-215ENST00000621181 LANCL1O43813 399 aa6.48□□□□□ -1.37
CLK1-215ENST00000621181 CSF1P09603 554 aa6.48□□□□□ -1.37
CLK1-215ENST00000621181 CTLA4P16410 223 aa6.48□□□□□ -1.37
CLK1-215ENST00000621181 NOS3P29474 1203 aa6.48□□□□□ -1.37
CLK1-215ENST00000621181 SLC6A1P30531 599 aa6.48□□□□□ -1.37
CLK1-215ENST00000621181 PSMB10P40306 273 aa6.48□□□□□ -1.37
CLK1-215ENST00000621181 GATA4P43694 442 aa6.48□□□□□ -1.37
CLK1-215ENST00000621181 IER3P46695 156 aa6.48□□□□□ -1.37
CLK1-215ENST00000621181 DBPQ10586 325 aaPredicted RBP6.48□□□□□ -1.37
CLK1-215ENST00000621181 TATDN3Q17R31 274 aa6.48□□□□□ -1.37
CLK1-215ENST00000621181 SFRP4Q6FHJ7 346 aaPredicted RBP6.48□□□□□ -1.37
CLK1-215ENST00000621181 RPL13AP3Q6NVV1 102 aa6.48□□□□□ -1.37
CLK1-215ENST00000621181 MZT2AQ6P582 158 aa6.48□□□□□ -1.37
CLK1-215ENST00000621181 ZNF841Q6ZN19 808 aa6.48□□□□□ -1.37
CLK1-215ENST00000621181 ASCC1Q8N9N2 400 aaKnown RBP6.48□□□□□ -1.37
CLK1-215ENST00000621181 LRRC75AQ8NAA5 344 aa6.48□□□□□ -1.37
CLK1-215ENST00000621181 OR13C2Q8NGS9 318 aa6.48□□□□□ -1.37
CLK1-215ENST00000621181 HAVCR2Q8TDQ0 301 aa6.48□□□□□ -1.37
CLK1-215ENST00000621181 LHX4Q969G2 390 aa6.48□□□□□ -1.37
CLK1-215ENST00000621181 TBX15Q96SF7 602 aa6.48□□□□□ -1.37
CLK1-215ENST00000621181 DDOQ99489 341 aa6.48□□□□□ -1.37
CLK1-215ENST00000621181 DPAGT1Q9H3H5 408 aa6.48□□□□□ -1.37
CLK1-215ENST00000621181 NIPAL2Q9H841 368 aa6.48□□□□□ -1.37
CLK1-215ENST00000621181 TMEM5Q9Y2B1 443 aa6.48□□□□□ -1.37
CLK1-215ENST00000621181 FAM96BQ9Y3D0 163 aa6.48□□□□□ -1.37
CLK1-215ENST00000621181 NOTCH3Q9UM47 2321 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms