RNA–Protein interactions for RNA: ENST00000578240.1

CTC1-203, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-203ENST00000578240 AGAP20933 346 aa11.14□□□□□ -0.63
CTC1-203ENST00000578240 RPS23P62266 143 aaKnown RBP11.14□□□□□ -0.63
CTC1-203ENST00000578240 OR8G1Q15617 311 aa11.14□□□□□ -0.63
CTC1-203ENST00000578240 PIGYQ3MUY2 71 aa11.14□□□□□ -0.63
CTC1-203ENST00000578240 ZNF260Q3ZCT1 412 aa11.14□□□□□ -0.63
CTC1-203ENST00000578240 OLFML2AQ68BL7 652 aa11.14□□□□□ -0.63
CTC1-203ENST00000578240 SLC22A25Q6T423 547 aa11.14□□□□□ -0.63
CTC1-203ENST00000578240 C11orf53Q8IXP5 236 aa11.14□□□□□ -0.63
CTC1-203ENST00000578240 SAXO1Q8IYX7 474 aa11.14□□□□□ -0.63
CTC1-203ENST00000578240 ZSCAN4Q8NAM6 433 aaPredicted RBP11.14□□□□□ -0.63
CTC1-203ENST00000578240 AQP3Q92482 292 aa11.14□□□□□ -0.63
CTC1-203ENST00000578240 ZNF488Q96MN9 340 aa11.14□□□□□ -0.63
CTC1-203ENST00000578240 NUDT16L1Q9BRJ7 211 aaKnown RBP11.14□□□□□ -0.63
CTC1-203ENST00000578240 PKIBQ9C010 78 aa11.14□□□□□ -0.63
CTC1-203ENST00000578240 SELENOIQ9C0D9 397 aa11.14□□□□□ -0.63
CTC1-203ENST00000578240 METTL9Q9H1A3 318 aa11.14□□□□□ -0.63
CTC1-203ENST00000578240 ZNF442Q9H7R0 627 aa11.14□□□□□ -0.63
CTC1-203ENST00000578240 ZMAT3Q9HA38 289 aaKnown RBP11.14□□□□□ -0.63
CTC1-203ENST00000578240 RBFOX1Q9NWB1 397 aaKnown RBP11.14□□□□□ -0.63
CTC1-203ENST00000578240 KIAA2026Q5HYC2 2103 aa11.13□□□□□ -0.63
CTC1-203ENST00000578240 ISPDA4D126 451 aa11.13□□□□□ -0.63
CTC1-203ENST00000578240 LRP5LA4QPB2 252 aa11.13□□□□□ -0.63
CTC1-203ENST00000578240 GABARAPH6UMI1 98 aa11.13□□□□□ -0.63
CTC1-203ENST00000578240 C19orf84I3L1E1 186 aa11.13□□□□□ -0.63
CTC1-203ENST00000578240 MFNGO00587 321 aa11.13□□□□□ -0.63
CTC1-203ENST00000578240 HTR3BO95264 441 aa11.13□□□□□ -0.63
CTC1-203ENST00000578240 PLAUP00749 431 aa11.13□□□□□ -0.63
CTC1-203ENST00000578240 HOXA4Q00056 320 aaPredicted RBP11.13□□□□□ -0.63
CTC1-203ENST00000578240 IL24Q13007 206 aa11.13□□□□□ -0.63
CTC1-203ENST00000578240 ASAH1Q13510 395 aa11.13□□□□□ -0.63
CTC1-203ENST00000578240 RSU1Q15404 277 aa11.13□□□□□ -0.63
CTC1-203ENST00000578240 TMEM200AQ86VY9 491 aa11.13□□□□□ -0.63
CTC1-203ENST00000578240 ZNF808Q8N4W9 903 aaPredicted RBP11.13□□□□□ -0.63
CTC1-203ENST00000578240 SCCPDHQ8NBX0 429 aa11.13□□□□□ -0.63
CTC1-203ENST00000578240 OR10R2Q8NGX6 335 aa11.13□□□□□ -0.63
CTC1-203ENST00000578240 OR8S1Q8NH09 359 aa11.13□□□□□ -0.63
CTC1-203ENST00000578240 CHPT1Q8WUD6 406 aa11.13□□□□□ -0.63
CTC1-203ENST00000578240 THAP7Q9BT49 309 aaPredicted RBP11.13□□□□□ -0.63
CTC1-203ENST00000578240 TLNRD1Q9H1K6 362 aa11.13□□□□□ -0.63
CTC1-203ENST00000578240 ELL3Q9HB65 397 aaPredicted RBP11.13□□□□□ -0.63
CTC1-203ENST00000578240 DIABLOQ9NR28 239 aa11.13□□□□□ -0.63
CTC1-203ENST00000578240 TMEM100Q9NV29 134 aa11.13□□□□□ -0.63
CTC1-203ENST00000578240 RABL2AQ9UBK7 228 aaPredicted RBP11.13□□□□□ -0.63
CTC1-203ENST00000578240 DUSP13Q9UII6 198 aa11.13□□□□□ -0.63
CTC1-203ENST00000578240 RABL2BQ9UNT1 228 aa11.13□□□□□ -0.63
CTC1-203ENST00000578240 TUBAL3A6NHL2 446 aa11.12□□□□□ -0.63
CTC1-203ENST00000578240 E7EQL1 145 aa11.12□□□□□ -0.63
CTC1-203ENST00000578240 PTBP3O95758 552 aaKnown RBP11.12□□□□□ -0.63
CTC1-203ENST00000578240 SPNP16150 400 aa11.12□□□□□ -0.63
CTC1-203ENST00000578240 BTCP35070 178 aa11.12□□□□□ -0.63
CTC1-203ENST00000578240 RFX2P48378 723 aa11.12□□□□□ -0.63
CTC1-203ENST00000578240 SRP9P49458 86 aaKnown RBP11.12□□□□□ -0.63
CTC1-203ENST00000578240 RBM11P57052 281 aaKnown RBP11.12□□□□□ -0.63
CTC1-203ENST00000578240 PITPNAQ00169 270 aa11.12□□□□□ -0.63
CTC1-203ENST00000578240 OXA1LQ15070 435 aa11.12□□□□□ -0.63
CTC1-203ENST00000578240 MPPED2Q15777 294 aa11.12□□□□□ -0.63
CTC1-203ENST00000578240 RGS21Q2M5E4 152 aa11.12□□□□□ -0.63
CTC1-203ENST00000578240 PRAMEF6Q5VXH4 476 aa11.12□□□□□ -0.63
CTC1-203ENST00000578240 ELP2Q6IA86 826 aa11.12□□□□□ -0.63
CTC1-203ENST00000578240 ZNF573Q86YE8 665 aa11.12□□□□□ -0.63
CTC1-203ENST00000578240 FBXL14Q8N1E6 418 aa11.12□□□□□ -0.63
CTC1-203ENST00000578240 LILRB1Q8NHL6 650 aaPredicted RBP11.12□□□□□ -0.63
CTC1-203ENST00000578240 GPX8Q8TED1 209 aa11.12□□□□□ -0.63
CTC1-203ENST00000578240 PSMG3-AS1Q96PY0 264 aa11.12□□□□□ -0.63
CTC1-203ENST00000578240 HIST1H2AAQ96QV6 131 aa11.12□□□□□ -0.63
CTC1-203ENST00000578240 MICU1Q9BPX6 476 aa11.12□□□□□ -0.63
CTC1-203ENST00000578240 C11orf54Q9H0W9 315 aaPredicted RBP11.12□□□□□ -0.63
CTC1-203ENST00000578240 ESRP2Q9H6T0 727 aaKnown RBP11.12□□□□□ -0.63
CTC1-203ENST00000578240 KLK11Q9UBX7 282 aa11.12□□□□□ -0.63
CTC1-203ENST00000578240 METTL21EPA6NDL7 271 aa11.11□□□□□ -0.63
CTC1-203ENST00000578240 ORC5O43913 435 aa11.11□□□□□ -0.63
CTC1-203ENST00000578240 SSX5O60225 188 aa11.11□□□□□ -0.63
CTC1-203ENST00000578240 HIST1H1DP16402 221 aaKnown RBP11.11□□□□□ -0.63
CTC1-203ENST00000578240 GNB3P16520 340 aa11.11□□□□□ -0.63
CTC1-203ENST00000578240 IGFBP2P18065 325 aa11.11□□□□□ -0.63
CTC1-203ENST00000578240 GDNFP39905 211 aa11.11□□□□□ -0.63
CTC1-203ENST00000578240 ERVK11-1P61568 191 aa11.11□□□□□ -0.63
CTC1-203ENST00000578240 KLF9Q13886 244 aaPredicted RBP11.11□□□□□ -0.63
CTC1-203ENST00000578240 TRIQKQ629K1 86 aa11.11□□□□□ -0.63
CTC1-203ENST00000578240 RAB12Q6IQ22 244 aa11.11□□□□□ -0.63
CTC1-203ENST00000578240 DCDC5Q6ZRR9 648 aa11.11□□□□□ -0.63
CTC1-203ENST00000578240 Q6ZTK2 550 aa11.11□□□□□ -0.63
CTC1-203ENST00000578240 OR13G1Q8NGZ3 307 aa11.11□□□□□ -0.63
CTC1-203ENST00000578240 NUDCD2Q8WVJ2 157 aa11.11□□□□□ -0.63
CTC1-203ENST00000578240 ST8SIA4Q92187 359 aa11.11□□□□□ -0.63
CTC1-203ENST00000578240 SEH1LQ96EE3 360 aa11.11□□□□□ -0.63
CTC1-203ENST00000578240 ARHGAP5-AS1Q96IT6 56 aa11.11□□□□□ -0.63
CTC1-203ENST00000578240 S100A13Q99584 98 aa11.11□□□□□ -0.63
CTC1-203ENST00000578240 TMEM204Q9BSN7 226 aa11.11□□□□□ -0.63
CTC1-203ENST00000578240 NGBQ9NPG2 151 aa11.11□□□□□ -0.63
CTC1-203ENST00000578240 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.11□□□□□ -0.63
CTC1-203ENST00000578240 NDRG3Q9UGV2 375 aa11.11□□□□□ -0.63
CTC1-203ENST00000578240 NOP16Q9Y3C1 178 aaKnown RBP11.11□□□□□ -0.63
CTC1-203ENST00000578240 CRYBG3Q68DQ2 2970 aa11.11□□□□□ -0.63
CTC1-203ENST00000578240 LINC00854A0A1B0GVQ3 168 aa11.11□□□□□ -0.63
CTC1-203ENST00000578240 MEIS3P1A6NDR6 274 aa11.11□□□□□ -0.63
CTC1-203ENST00000578240 TMEM210A6NLX4 147 aa11.11□□□□□ -0.63
CTC1-203ENST00000578240 GEMIN2O14893 280 aaKnown RBP11.11□□□□□ -0.63
CTC1-203ENST00000578240 ZNF780AO75290 641 aaPredicted RBP11.11□□□□□ -0.63
CTC1-203ENST00000578240 MELTFP08582 738 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms