RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 HCFC1P51610 2035 aa12.17□□□□□ -0.46
COMMD4-205ENST00000562310 A0A0A6YYD4 124 aa12.17□□□□□ -0.46
COMMD4-205ENST00000562310 A0A1W2PP11 408 aa12.17□□□□□ -0.46
COMMD4-205ENST00000562310 CENPXA8MT69 81 aa12.17□□□□□ -0.46
COMMD4-205ENST00000562310 B8ZZF3 427 aa12.17□□□□□ -0.46
COMMD4-205ENST00000562310 H7C417 338 aa12.17□□□□□ -0.46
COMMD4-205ENST00000562310 TPD52L2O43399 206 aaKnown RBP12.17□□□□□ -0.46
COMMD4-205ENST00000562310 CA11O75493 328 aa12.17□□□□□ -0.46
COMMD4-205ENST00000562310 MELTFP08582 738 aa12.17□□□□□ -0.46
COMMD4-205ENST00000562310 CD3GP09693 182 aa12.17□□□□□ -0.46
COMMD4-205ENST00000562310 HIST1H1DP16402 221 aaKnown RBP12.17□□□□□ -0.46
COMMD4-205ENST00000562310 GDNFP39905 211 aa12.17□□□□□ -0.46
COMMD4-205ENST00000562310 TFF3Q07654 80 aa12.17□□□□□ -0.46
COMMD4-205ENST00000562310 DYRK1AQ13627 763 aa12.17□□□□□ -0.46
COMMD4-205ENST00000562310 MOGAT2Q3SYC2 334 aa12.17□□□□□ -0.46
COMMD4-205ENST00000562310 ZNF260Q3ZCT1 412 aa12.17□□□□□ -0.46
COMMD4-205ENST00000562310 RNASE12Q5GAN4 147 aaKnown RBP12.17□□□□□ -0.46
COMMD4-205ENST00000562310 BEX5Q5H9J7 111 aa12.17□□□□□ -0.46
COMMD4-205ENST00000562310 NHLRC3Q5JS37 347 aa12.17□□□□□ -0.46
COMMD4-205ENST00000562310 VHLLQ6RSH7 139 aa12.17□□□□□ -0.46
COMMD4-205ENST00000562310 DCDC5Q6ZRR9 648 aa12.17□□□□□ -0.46
COMMD4-205ENST00000562310 Q6ZTK2 550 aa12.17□□□□□ -0.46
COMMD4-205ENST00000562310 LINC00596Q86U02 117 aa12.17□□□□□ -0.46
COMMD4-205ENST00000562310 TOMM5Q8N4H5 51 aa12.17□□□□□ -0.46
COMMD4-205ENST00000562310 GPX8Q8TED1 209 aa12.17□□□□□ -0.46
COMMD4-205ENST00000562310 NICN1Q9BSH3 213 aa12.17□□□□□ -0.46
COMMD4-205ENST00000562310 CA10Q9NS85 328 aa12.17□□□□□ -0.46
COMMD4-205ENST00000562310 MTFP1Q9UDX5 166 aa12.17□□□□□ -0.46
COMMD4-205ENST00000562310 DUSP13Q9UII6 198 aa12.17□□□□□ -0.46
COMMD4-205ENST00000562310 FZR1Q9UM11 496 aa12.17□□□□□ -0.46
COMMD4-205ENST00000562310 ATP23Q9Y6H3 246 aa12.17□□□□□ -0.46
COMMD4-205ENST00000562310 TUBAL3A6NHL2 446 aa12.16□□□□□ -0.46
COMMD4-205ENST00000562310 FOXI3A8MTJ6 420 aaPredicted RBP12.16□□□□□ -0.46
COMMD4-205ENST00000562310 SERPINE3A8MV23 424 aa12.16□□□□□ -0.46
COMMD4-205ENST00000562310 MFNGO00587 321 aa12.16□□□□□ -0.46
COMMD4-205ENST00000562310 MLNRO43193 412 aa12.16□□□□□ -0.46
COMMD4-205ENST00000562310 LYRM1O43325 122 aa12.16□□□□□ -0.46
COMMD4-205ENST00000562310 LANCL1O43813 399 aa12.16□□□□□ -0.46
COMMD4-205ENST00000562310 ORC5O43913 435 aa12.16□□□□□ -0.46
COMMD4-205ENST00000562310 RBBP9O75884 186 aa12.16□□□□□ -0.46
COMMD4-205ENST00000562310 CD3EP07766 207 aa12.16□□□□□ -0.46
COMMD4-205ENST00000562310 ACAA1P09110 424 aaPredicted RBP12.16□□□□□ -0.46
COMMD4-205ENST00000562310 CSF1P09603 554 aa12.16□□□□□ -0.46
COMMD4-205ENST00000562310 RBM11P57052 281 aaKnown RBP12.16□□□□□ -0.46
COMMD4-205ENST00000562310 FGF12P61328 243 aa12.16□□□□□ -0.46
COMMD4-205ENST00000562310 IGFBP7Q16270 282 aa12.16□□□□□ -0.46
COMMD4-205ENST00000562310 MSMPQ1L6U9 139 aa12.16□□□□□ -0.46
COMMD4-205ENST00000562310 CDNFQ49AH0 187 aa12.16□□□□□ -0.46
COMMD4-205ENST00000562310 Q6ZR03 302 aa12.16□□□□□ -0.46
COMMD4-205ENST00000562310 ITLN2Q8WWU7 325 aaPredicted RBP12.16□□□□□ -0.46
COMMD4-205ENST00000562310 SLAMF9Q96A28 289 aa12.16□□□□□ -0.46
COMMD4-205ENST00000562310 TLNRD1Q9H1K6 362 aa12.16□□□□□ -0.46
COMMD4-205ENST00000562310 ZNF107Q9UII5 783 aaPredicted RBP12.16□□□□□ -0.46
COMMD4-205ENST00000562310 POU2F3Q9UKI9 436 aa12.16□□□□□ -0.46
COMMD4-205ENST00000562310 HSF4Q9ULV5 492 aa12.16□□□□□ -0.46
COMMD4-205ENST00000562310 TMEM235A6NFC5 223 aa12.15□□□□□ -0.46
COMMD4-205ENST00000562310 PLA2G10O15496 165 aa12.15□□□□□ -0.46
COMMD4-205ENST00000562310 SOCS1O15524 211 aa12.15□□□□□ -0.46
COMMD4-205ENST00000562310 SFTPBP07988 381 aa12.15□□□□□ -0.46
COMMD4-205ENST00000562310 BCL3P20749 454 aa12.15□□□□□ -0.46
COMMD4-205ENST00000562310 BLVRBP30043 206 aaPredicted RBP12.15□□□□□ -0.46
COMMD4-205ENST00000562310 RCVRNP35243 200 aa12.15□□□□□ -0.46
COMMD4-205ENST00000562310 FAUP35544 74 aaKnown RBP12.15□□□□□ -0.46
COMMD4-205ENST00000562310 CD200P41217 278 aa12.15□□□□□ -0.46
COMMD4-205ENST00000562310 CBX5P45973 191 aa12.15□□□□□ -0.46
COMMD4-205ENST00000562310 GNG2P59768 71 aa12.15□□□□□ -0.46
COMMD4-205ENST00000562310 ZNF154Q13106 437 aa12.15□□□□□ -0.46
COMMD4-205ENST00000562310 KLF9Q13886 244 aaPredicted RBP12.15□□□□□ -0.46
COMMD4-205ENST00000562310 IL13RA2Q14627 380 aa12.15□□□□□ -0.46
COMMD4-205ENST00000562310 MPV17LQ2QL34 196 aa12.15□□□□□ -0.46
COMMD4-205ENST00000562310 Q6ZNX1 250 aa12.15□□□□□ -0.46
COMMD4-205ENST00000562310 WDR86Q86TI4 376 aa12.15□□□□□ -0.46
COMMD4-205ENST00000562310 FBXL14Q8N1E6 418 aa12.15□□□□□ -0.46
COMMD4-205ENST00000562310 CELF2-AS1Q8N7Q2 184 aa12.15□□□□□ -0.46
COMMD4-205ENST00000562310 SCCPDHQ8NBX0 429 aa12.15□□□□□ -0.46
COMMD4-205ENST00000562310 OR10AD1Q8NGE0 317 aa12.15□□□□□ -0.46
COMMD4-205ENST00000562310 ENKURQ8TC29 256 aa12.15□□□□□ -0.46
COMMD4-205ENST00000562310 GCDHQ92947 438 aaPredicted RBP12.15□□□□□ -0.46
COMMD4-205ENST00000562310 SEH1LQ96EE3 360 aa12.15□□□□□ -0.46
COMMD4-205ENST00000562310 PLPPR2Q96GM1 343 aa12.15□□□□□ -0.46
COMMD4-205ENST00000562310 SYT3Q9BQG1 590 aa12.15□□□□□ -0.46
COMMD4-205ENST00000562310 MRPL37Q9BZE1 423 aaKnown RBP12.15□□□□□ -0.46
COMMD4-205ENST00000562310 C11orf54Q9H0W9 315 aaPredicted RBP12.15□□□□□ -0.46
COMMD4-205ENST00000562310 RBFOX1Q9NWB1 397 aaKnown RBP12.15□□□□□ -0.46
COMMD4-205ENST00000562310 ST3GAL6Q9Y274 331 aa12.15□□□□□ -0.46
COMMD4-205ENST00000562310 RNF115Q9Y4L5 304 aa12.15□□□□□ -0.46
COMMD4-205ENST00000562310 CACNG2Q9Y698 323 aa12.15□□□□□ -0.46
COMMD4-205ENST00000562310 DIDO1Q9BTC0 2240 aaKnown RBP12.15□□□□□ -0.46
COMMD4-205ENST00000562310 HIVEP3Q5T1R4 2406 aa12.15□□□□□ -0.47
COMMD4-205ENST00000562310 CADP27708 2225 aa12.14□□□□□ -0.47
COMMD4-205ENST00000562310 LINC00854A0A1B0GVQ3 168 aa12.14□□□□□ -0.47
COMMD4-205ENST00000562310 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.14□□□□□ -0.47
COMMD4-205ENST00000562310 ANKRD20A5PA0PJZ0 165 aa12.14□□□□□ -0.47
COMMD4-205ENST00000562310 MEIOCA2RUB1 952 aa12.14□□□□□ -0.47
COMMD4-205ENST00000562310 NAP1L6A6NFF2 107 aa12.14□□□□□ -0.47
COMMD4-205ENST00000562310 H0YL77 283 aa12.14□□□□□ -0.47
COMMD4-205ENST00000562310 SYNGR1O43759 233 aa12.14□□□□□ -0.47
COMMD4-205ENST00000562310 ZG16O60844 167 aa12.14□□□□□ -0.47
COMMD4-205ENST00000562310 PTBP3O95758 552 aaKnown RBP12.14□□□□□ -0.47
COMMD4-205ENST00000562310 PTHLHP12272 177 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms