RNA–Protein interactions for RNA: ENST00000556833.1

CHD8-211, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-211ENST00000556833 XPNPEP2O43895 674 aa11.91□□□□□ -0.5
CHD8-211ENST00000556833 DHRS3O75911 302 aa11.91□□□□□ -0.5
CHD8-211ENST00000556833 TTRP02766 147 aa11.91□□□□□ -0.5
CHD8-211ENST00000556833 HMGN1P05114 100 aa11.91□□□□□ -0.5
CHD8-211ENST00000556833 OSMP13725 252 aa11.91□□□□□ -0.5
CHD8-211ENST00000556833 VDAC2P45880 294 aaPredicted RBP11.91□□□□□ -0.5
CHD8-211ENST00000556833 RIDAP52758 137 aaKnown RBP11.91□□□□□ -0.5
CHD8-211ENST00000556833 DLX6P56179 175 aa11.91□□□□□ -0.5
CHD8-211ENST00000556833 CDK5Q00535 292 aa11.91□□□□□ -0.5
CHD8-211ENST00000556833 SNAPC1Q16533 368 aa11.91□□□□□ -0.5
CHD8-211ENST00000556833 AANATQ16613 207 aa11.91□□□□□ -0.5
CHD8-211ENST00000556833 ZNF829Q3KNS6 432 aaPredicted RBP11.91□□□□□ -0.5
CHD8-211ENST00000556833 SLC35D3Q5M8T2 416 aa11.91□□□□□ -0.5
CHD8-211ENST00000556833 FOXB2Q5VYV0 432 aa11.91□□□□□ -0.5
CHD8-211ENST00000556833 KCTD18Q6PI47 426 aaPredicted RBP11.91□□□□□ -0.5
CHD8-211ENST00000556833 LIAT1Q6ZQX7 453 aa11.91□□□□□ -0.5
CHD8-211ENST00000556833 REC114Q7Z4M0 266 aa11.91□□□□□ -0.5
CHD8-211ENST00000556833 NDUFA11Q86Y39 141 aa11.91□□□□□ -0.5
CHD8-211ENST00000556833 CALHM1Q8IU99 346 aa11.91□□□□□ -0.5
CHD8-211ENST00000556833 TPRX1Q8N7U7 411 aa11.91□□□□□ -0.5
CHD8-211ENST00000556833 RPS4Y2Q8TD47 263 aa11.91□□□□□ -0.5
CHD8-211ENST00000556833 NRIP2Q9BQI9 281 aa11.91□□□□□ -0.5
CHD8-211ENST00000556833 YIPF3Q9GZM5 350 aa11.91□□□□□ -0.5
CHD8-211ENST00000556833 MUC13Q9H3R2 512 aa11.91□□□□□ -0.5
CHD8-211ENST00000556833 ZNF556Q9HAH1 456 aa11.91□□□□□ -0.5
CHD8-211ENST00000556833 PQLC2LA1A4F0 135 aa11.9□□□□□ -0.5
CHD8-211ENST00000556833 LOC110117498-PIK3R3F6TDL0 507 aa11.9□□□□□ -0.5
CHD8-211ENST00000556833 F8VVB4 439 aa11.9□□□□□ -0.5
CHD8-211ENST00000556833 F8VWA3 439 aa11.9□□□□□ -0.5
CHD8-211ENST00000556833 CALCBP10092 127 aa11.9□□□□□ -0.5
CHD8-211ENST00000556833 CD33P20138 364 aa11.9□□□□□ -0.5
CHD8-211ENST00000556833 CD24P25063 80 aa11.9□□□□□ -0.5
CHD8-211ENST00000556833 SNU13P55769 128 aaKnown RBP11.9□□□□□ -0.5
CHD8-211ENST00000556833 CBX1P83916 185 aa11.9□□□□□ -0.5
CHD8-211ENST00000556833 SLC34A1Q06495 639 aa11.9□□□□□ -0.5
CHD8-211ENST00000556833 CLVS2Q5SYC1 327 aa11.9□□□□□ -0.5
CHD8-211ENST00000556833 BCL2L15Q5TBC7 163 aa11.9□□□□□ -0.5
CHD8-211ENST00000556833 ZNF573Q86YE8 665 aa11.9□□□□□ -0.5
CHD8-211ENST00000556833 OR4F17Q8NGA8 305 aa11.9□□□□□ -0.5
CHD8-211ENST00000556833 CANT1Q8WVQ1 401 aa11.9□□□□□ -0.5
CHD8-211ENST00000556833 SLAMF9Q96A28 289 aa11.9□□□□□ -0.5
CHD8-211ENST00000556833 OR4F4Q96R69 305 aa11.9□□□□□ -0.5
CHD8-211ENST00000556833 PRSS22Q9GZN4 317 aa11.9□□□□□ -0.5
CHD8-211ENST00000556833 IL36RNQ9UBH0 155 aa11.9□□□□□ -0.5
CHD8-211ENST00000556833 NUFIP1Q9UHK0 495 aaKnown RBP11.9□□□□□ -0.5
CHD8-211ENST00000556833 SLC22A13Q9Y226 551 aa11.9□□□□□ -0.5
CHD8-211ENST00000556833 ZNF281Q9Y2X9 895 aa11.9□□□□□ -0.5
CHD8-211ENST00000556833 KIAA2026Q5HYC2 2103 aa11.89□□□□□ -0.51
CHD8-211ENST00000556833 COL7A1Q02388 2944 aa11.89□□□□□ -0.51
CHD8-211ENST00000556833 FAM172BPA6NC97 362 aa11.89□□□□□ -0.51
CHD8-211ENST00000556833 FAM90A8PA6NJQ4 464 aa11.89□□□□□ -0.51
CHD8-211ENST00000556833 SH2D7A6NKC9 451 aaPredicted RBP11.89□□□□□ -0.51
CHD8-211ENST00000556833 C17orf98A8MV24 154 aa11.89□□□□□ -0.51
CHD8-211ENST00000556833 ODF3BA8MYP8 253 aa11.89□□□□□ -0.51
CHD8-211ENST00000556833 RPP14O95059 124 aaKnown RBP11.89□□□□□ -0.51
CHD8-211ENST00000556833 IGLV3-1P01715 115 aa11.89□□□□□ -0.51
CHD8-211ENST00000556833 CXCR4P61073 352 aa11.89□□□□□ -0.51
CHD8-211ENST00000556833 EMX1Q04741 257 aaPredicted RBP11.89□□□□□ -0.51
CHD8-211ENST00000556833 CCDC121Q6ZUS5 278 aa11.89□□□□□ -0.51
CHD8-211ENST00000556833 TCF23Q7RTU1 214 aa11.89□□□□□ -0.51
CHD8-211ENST00000556833 PIGWQ7Z7B1 504 aa11.89□□□□□ -0.51
CHD8-211ENST00000556833 ZNF679Q8IYX0 411 aa11.89□□□□□ -0.51
CHD8-211ENST00000556833 OR13D1Q8NGV5 346 aa11.89□□□□□ -0.51
CHD8-211ENST00000556833 NDNFQ8TB73 568 aa11.89□□□□□ -0.51
CHD8-211ENST00000556833 FOXRED1Q96CU9 486 aaPredicted RBP11.89□□□□□ -0.51
CHD8-211ENST00000556833 NSL1Q96IY1 281 aa11.89□□□□□ -0.51
CHD8-211ENST00000556833 TBX5Q99593 518 aa11.89□□□□□ -0.51
CHD8-211ENST00000556833 CHST6Q9GZX3 395 aa11.89□□□□□ -0.51
CHD8-211ENST00000556833 POLDIP2Q9Y2S7 368 aa11.89□□□□□ -0.51
CHD8-211ENST00000556833 ARRDC5A6NEK1 342 aa11.88□□□□□ -0.51
CHD8-211ENST00000556833 VGLL3A8MV65 326 aa11.88□□□□□ -0.51
CHD8-211ENST00000556833 PRKYO43930 277 aa11.88□□□□□ -0.51
CHD8-211ENST00000556833 ZNF728P0DKX0 622 aa11.88□□□□□ -0.51
CHD8-211ENST00000556833 IGHV1-8P0DP01 117 aa11.88□□□□□ -0.51
CHD8-211ENST00000556833 PF4V1P10720 104 aa11.88□□□□□ -0.51
CHD8-211ENST00000556833 ATP6V1B1P15313 513 aa11.88□□□□□ -0.51
CHD8-211ENST00000556833 MNAT1P51948 309 aa11.88□□□□□ -0.51
CHD8-211ENST00000556833 OR12D2P58182 307 aa11.88□□□□□ -0.51
CHD8-211ENST00000556833 ACTA2P62736 377 aa11.88□□□□□ -0.51
CHD8-211ENST00000556833 ACTG2P63267 376 aa11.88□□□□□ -0.51
CHD8-211ENST00000556833 ACTC1P68032 377 aa11.88□□□□□ -0.51
CHD8-211ENST00000556833 ACTA1P68133 377 aa11.88□□□□□ -0.51
CHD8-211ENST00000556833 KHDC1LQ5JSQ8 128 aa11.88□□□□□ -0.51
CHD8-211ENST00000556833 LCN1P1Q5VSP4 162 aa11.88□□□□□ -0.51
CHD8-211ENST00000556833 ZNF626Q68DY1 528 aa11.88□□□□□ -0.51
CHD8-211ENST00000556833 C11orf87Q6NUJ2 197 aa11.88□□□□□ -0.51
CHD8-211ENST00000556833 ZNF322Q6U7Q0 402 aaPredicted RBP11.88□□□□□ -0.51
CHD8-211ENST00000556833 BAIAP2L2Q6UXY1 529 aa11.88□□□□□ -0.51
CHD8-211ENST00000556833 GDPD3Q7L5L3 318 aa11.88□□□□□ -0.51
CHD8-211ENST00000556833 SLC35F2Q8IXU6 374 aa11.88□□□□□ -0.51
CHD8-211ENST00000556833 Q8N2B8 174 aa11.88□□□□□ -0.51
CHD8-211ENST00000556833 ASB9Q96DX5 294 aa11.88□□□□□ -0.51
CHD8-211ENST00000556833 CNN2Q99439 309 aaKnown RBP11.88□□□□□ -0.51
CHD8-211ENST00000556833 CADM1Q9BY67 442 aaKnown RBP11.88□□□□□ -0.51
CHD8-211ENST00000556833 SLC25A19Q9HC21 320 aa11.88□□□□□ -0.51
CHD8-211ENST00000556833 HES4Q9HCC6 221 aa11.88□□□□□ -0.51
CHD8-211ENST00000556833 OR52A1Q9UKL2 312 aa11.88□□□□□ -0.51
CHD8-211ENST00000556833 TBL2Q9Y4P3 447 aaKnown RBP11.88□□□□□ -0.51
CHD8-211ENST00000556833 A0A1B0GTI1 187 aa11.87□□□□□ -0.51
CHD8-211ENST00000556833 TMEM82A0PJX8 343 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms