RNA–Protein interactions for RNA: ENST00000552783.5

LIMA1-214, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMA1, Length 3,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-214ENST00000552783 FRZBQ92765 325 aa4.26□□□□□ -1.73
LIMA1-214ENST00000552783 SLAMF6Q96DU3 332 aa4.26□□□□□ -1.73
LIMA1-214ENST00000552783 SHDQ96IW2 340 aa4.26□□□□□ -1.73
LIMA1-214ENST00000552783 GPHA2Q96T91 129 aa4.26□□□□□ -1.73
LIMA1-214ENST00000552783 ATG101Q9BSB4 218 aa4.26□□□□□ -1.73
LIMA1-214ENST00000552783 TMEM59Q9BXS4 323 aa4.26□□□□□ -1.73
LIMA1-214ENST00000552783 NELFAQ9H3P2 528 aa4.26□□□□□ -1.73
LIMA1-214ENST00000552783 KCNJ16Q9NPI9 418 aa4.26□□□□□ -1.73
LIMA1-214ENST00000552783 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.26□□□□□ -1.73
LIMA1-214ENST00000552783 FGF21Q9NSA1 209 aa4.26□□□□□ -1.73
LIMA1-214ENST00000552783 ZNF701Q9NV72 531 aaPredicted RBP4.26□□□□□ -1.73
LIMA1-214ENST00000552783 SRPK3Q9UPE1 567 aa4.26□□□□□ -1.73
LIMA1-214ENST00000552783 PTPRZ1P23471 2315 aaPredicted RBP4.25□□□□□ -1.73
LIMA1-214ENST00000552783 TMED7-TICAM2A0A0A6YYA0 188 aa4.25□□□□□ -1.73
LIMA1-214ENST00000552783 C2CD4DB7Z1M9 353 aa4.25□□□□□ -1.73
LIMA1-214ENST00000552783 HSD17B6O14756 317 aa4.25□□□□□ -1.73
LIMA1-214ENST00000552783 IGHV4-34P06331 123 aa4.25□□□□□ -1.73
LIMA1-214ENST00000552783 HCKP08631 526 aa4.25□□□□□ -1.73
LIMA1-214ENST00000552783 EPHA1P21709 976 aa4.25□□□□□ -1.73
LIMA1-214ENST00000552783 MAS1LP35410 378 aa4.25□□□□□ -1.73
LIMA1-214ENST00000552783 APLNRP35414 380 aa4.25□□□□□ -1.73
LIMA1-214ENST00000552783 OR3A2P47893 321 aa4.25□□□□□ -1.73
LIMA1-214ENST00000552783 MMP16P51512 607 aa4.25□□□□□ -1.73
LIMA1-214ENST00000552783 HSD17B7P56937 341 aa4.25□□□□□ -1.73
LIMA1-214ENST00000552783 SLC35A1P78382 337 aa4.25□□□□□ -1.73
LIMA1-214ENST00000552783 TMEM176BQ3YBM2 270 aaPredicted RBP4.25□□□□□ -1.73
LIMA1-214ENST00000552783 PRAMEF20Q5VT98 475 aa4.25□□□□□ -1.73
LIMA1-214ENST00000552783 SPSB3Q6PJ21 355 aa4.25□□□□□ -1.73
LIMA1-214ENST00000552783 ABHD12BQ7Z5M8 362 aaPredicted RBP4.25□□□□□ -1.73
LIMA1-214ENST00000552783 C1QL4Q86Z23 238 aa4.25□□□□□ -1.73
LIMA1-214ENST00000552783 ZFP62Q8NB50 900 aaPredicted RBP4.25□□□□□ -1.73
LIMA1-214ENST00000552783 GALNT14Q96FL9 552 aa4.25□□□□□ -1.73
LIMA1-214ENST00000552783 S100A13Q99584 98 aa4.25□□□□□ -1.73
LIMA1-214ENST00000552783 SSX3Q99909 188 aa4.25□□□□□ -1.73
LIMA1-214ENST00000552783 ARV1Q9H2C2 271 aa4.25□□□□□ -1.73
LIMA1-214ENST00000552783 FAM212BQ9NTI7 297 aaPredicted RBP4.25□□□□□ -1.73
LIMA1-214ENST00000552783 LIPGQ9Y5X9 500 aa4.25□□□□□ -1.73
LIMA1-214ENST00000552783 FER1L5A0AVI2 2057 aa4.25□□□□□ -1.73
LIMA1-214ENST00000552783 DIDO1Q9BTC0 2240 aaKnown RBP4.25□□□□□ -1.73
LIMA1-214ENST00000552783 A0A087X0M5 115 aa4.25□□□□□ -1.73
LIMA1-214ENST00000552783 A0A1B0GX30 115 aa4.25□□□□□ -1.73
LIMA1-214ENST00000552783 A0A1W2PPC4 97 aa4.25□□□□□ -1.73
LIMA1-214ENST00000552783 FAM221AA4D161 298 aa4.25□□□□□ -1.73
LIMA1-214ENST00000552783 CCDC85CA6NKD9 419 aa4.25□□□□□ -1.73
LIMA1-214ENST00000552783 TAAR5O14804 337 aa4.25□□□□□ -1.73
LIMA1-214ENST00000552783 RER1O15258 196 aa4.25□□□□□ -1.73
LIMA1-214ENST00000552783 BCAT2O15382 392 aaPredicted RBP4.25□□□□□ -1.73
LIMA1-214ENST00000552783 CYB5BO43169 146 aa4.25□□□□□ -1.73
LIMA1-214ENST00000552783 DUX1O43812 170 aa4.25□□□□□ -1.73
LIMA1-214ENST00000552783 IFNA17P01571 189 aa4.25□□□□□ -1.73
LIMA1-214ENST00000552783 GAPDHP04406 335 aaKnown RBP4.25□□□□□ -1.73
LIMA1-214ENST00000552783 HEXBP07686 556 aa4.25□□□□□ -1.73
LIMA1-214ENST00000552783 GUSBP08236 651 aa4.25□□□□□ -1.73
LIMA1-214ENST00000552783 DBHP09172 617 aa4.25□□□□□ -1.73
LIMA1-214ENST00000552783 ZNF20P17024 532 aa4.25□□□□□ -1.73
LIMA1-214ENST00000552783 DDTP30046 118 aa4.25□□□□□ -1.73
LIMA1-214ENST00000552783 OPRM1P35372 400 aa4.25□□□□□ -1.73
LIMA1-214ENST00000552783 RGS19P49795 217 aa4.25□□□□□ -1.73
LIMA1-214ENST00000552783 RBP2P50120 134 aa4.25□□□□□ -1.73
LIMA1-214ENST00000552783 RND3P61587 244 aa4.25□□□□□ -1.73
LIMA1-214ENST00000552783 RHEBQ15382 184 aa4.25□□□□□ -1.73
LIMA1-214ENST00000552783 SOHLH1Q5JUK2 328 aa4.25□□□□□ -1.73
LIMA1-214ENST00000552783 EIF5AL1Q6IS14 154 aaKnown RBP4.25□□□□□ -1.73
LIMA1-214ENST00000552783 CPEB2Q7Z5Q1 589 aaKnown RBP4.25□□□□□ -1.73
LIMA1-214ENST00000552783 TGIF2LXQ8IUE1 241 aa4.25□□□□□ -1.73
LIMA1-214ENST00000552783 CYB561D1Q8N8Q1 229 aa4.25□□□□□ -1.73
LIMA1-214ENST00000552783 OR8B12Q8NGG6 310 aa4.25□□□□□ -1.73
LIMA1-214ENST00000552783 OR5D14Q8NGL3 314 aa4.25□□□□□ -1.73
LIMA1-214ENST00000552783 OR11L1Q8NGX0 322 aa4.25□□□□□ -1.73
LIMA1-214ENST00000552783 MFSD8Q8NHS3 518 aa4.25□□□□□ -1.73
LIMA1-214ENST00000552783 ADIPOR1Q96A54 375 aa4.25□□□□□ -1.73
LIMA1-214ENST00000552783 ZNF2Q9BSG1 426 aaPredicted RBP4.25□□□□□ -1.73
LIMA1-214ENST00000552783 C8orf33Q9H7E9 229 aaPredicted RBP4.25□□□□□ -1.73
LIMA1-214ENST00000552783 GPR84Q9NQS5 396 aa4.25□□□□□ -1.73
LIMA1-214ENST00000552783 UFSP2Q9NUQ7 469 aa4.25□□□□□ -1.73
LIMA1-214ENST00000552783 CLEC1BQ9P126 229 aa4.25□□□□□ -1.73
LIMA1-214ENST00000552783 SUSD2Q9UGT4 822 aa4.25□□□□□ -1.73
LIMA1-214ENST00000552783 TUBD1Q9UJT1 453 aa4.25□□□□□ -1.73
LIMA1-214ENST00000552783 B3GALT5Q9Y2C3 310 aa4.25□□□□□ -1.73
LIMA1-214ENST00000552783 POMT1Q9Y6A1 747 aa4.25□□□□□ -1.73
LIMA1-214ENST00000552783 THADAQ6YHU6 1953 aa4.25□□□□□ -1.73
LIMA1-214ENST00000552783 TLCD2A6NGC4 264 aa4.25□□□□□ -1.73
LIMA1-214ENST00000552783 FTCDNL1E5RQL4 147 aa4.25□□□□□ -1.73
LIMA1-214ENST00000552783 SLC31A2O15432 143 aa4.25□□□□□ -1.73
LIMA1-214ENST00000552783 NXPH3O95157 252 aa4.25□□□□□ -1.73
LIMA1-214ENST00000552783 F10P00742 488 aa4.25□□□□□ -1.73
LIMA1-214ENST00000552783 CFIP05156 583 aa4.25□□□□□ -1.73
LIMA1-214ENST00000552783 OR5AC1P0C628 307 aa4.25□□□□□ -1.73
LIMA1-214ENST00000552783 TRGC1P0CF51 173 aa4.25□□□□□ -1.73
LIMA1-214ENST00000552783 TBPP20226 339 aa4.25□□□□□ -1.73
LIMA1-214ENST00000552783 OMGP23515 440 aa4.25□□□□□ -1.73
LIMA1-214ENST00000552783 S100A2P29034 98 aa4.25□□□□□ -1.73
LIMA1-214ENST00000552783 BLVRBP30043 206 aaPredicted RBP4.25□□□□□ -1.73
LIMA1-214ENST00000552783 TAGLN2P37802 199 aaKnown RBP4.25□□□□□ -1.73
LIMA1-214ENST00000552783 SLC26A5P58743 744 aa4.25□□□□□ -1.73
LIMA1-214ENST00000552783 SSTP61278 116 aa4.25□□□□□ -1.73
LIMA1-214ENST00000552783 DLK1P80370 383 aa4.25□□□□□ -1.73
LIMA1-214ENST00000552783 TLE1Q04724 770 aa4.25□□□□□ -1.73
LIMA1-214ENST00000552783 CHD3Q12873 2000 aaKnown RBP4.25□□□□□ -1.73
LIMA1-214ENST00000552783 C9orf40Q8IXQ3 194 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms