RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 C9orf40Q8IXQ3 194 aa9.63□□□□□ -0.87
CLSTN3-207ENST00000537408 BHLHE23Q8NDY6 225 aa9.63□□□□□ -0.87
CLSTN3-207ENST00000537408 MOB3AQ96BX8 217 aa9.63□□□□□ -0.87
CLSTN3-207ENST00000537408 RBMXL1Q96E39 390 aaKnown RBP9.63□□□□□ -0.87
CLSTN3-207ENST00000537408 SDSLQ96GA7 329 aa9.63□□□□□ -0.87
CLSTN3-207ENST00000537408 ZNF764Q96H86 408 aaPredicted RBP9.63□□□□□ -0.87
CLSTN3-207ENST00000537408 PGAM5Q96HS1 289 aa9.63□□□□□ -0.87
CLSTN3-207ENST00000537408 OR10C1Q96KK4 312 aa9.63□□□□□ -0.87
CLSTN3-207ENST00000537408 C20orf141Q9NUB4 165 aa9.63□□□□□ -0.87
CLSTN3-207ENST00000537408 DHDHQ9UQ10 334 aa9.63□□□□□ -0.87
CLSTN3-207ENST00000537408 K7ERU9 68 aa9.63□□□□□ -0.87
CLSTN3-207ENST00000537408 PLPP1O14494 284 aa9.63□□□□□ -0.87
CLSTN3-207ENST00000537408 C1QL1O75973 258 aa9.63□□□□□ -0.87
CLSTN3-207ENST00000537408 NXPH1P58417 271 aa9.63□□□□□ -0.87
CLSTN3-207ENST00000537408 BTG2P78543 158 aa9.63□□□□□ -0.87
CLSTN3-207ENST00000537408 CCSMST1Q4G0I0 132 aa9.63□□□□□ -0.87
CLSTN3-207ENST00000537408 ZCCHC14Q8WYQ9 949 aaKnown RBP9.63□□□□□ -0.87
CLSTN3-207ENST00000537408 AK3Q9UIJ7 227 aa9.63□□□□□ -0.87
CLSTN3-207ENST00000537408 PILRBQ9UKJ0 227 aa9.63□□□□□ -0.87
CLSTN3-207ENST00000537408 HIST1H1CP16403 213 aaKnown RBP9.63□□□□□ -0.87
CLSTN3-207ENST00000537408 NPPBP16860 134 aa9.63□□□□□ -0.87
CLSTN3-207ENST00000537408 DNASE1L1P49184 302 aa9.63□□□□□ -0.87
CLSTN3-207ENST00000537408 FUT5Q11128 374 aa9.63□□□□□ -0.87
CLSTN3-207ENST00000537408 LCN10Q6JVE6 187 aa9.63□□□□□ -0.87
CLSTN3-207ENST00000537408 HOGA1Q86XE5 327 aa9.63□□□□□ -0.87
CLSTN3-207ENST00000537408 NUP43Q8NFH3 380 aa9.63□□□□□ -0.87
CLSTN3-207ENST00000537408 RPS4Y2Q8TD47 263 aa9.63□□□□□ -0.87
CLSTN3-207ENST00000537408 ZNF480Q8WV37 535 aa9.63□□□□□ -0.87
CLSTN3-207ENST00000537408 TMEM37Q8WXS4 190 aa9.63□□□□□ -0.87
CLSTN3-207ENST00000537408 HSPB7Q9UBY9 170 aa9.63□□□□□ -0.87
CLSTN3-207ENST00000537408 CYR61O00622 381 aa9.62□□□□□ -0.87
CLSTN3-207ENST00000537408 FZD2Q14332 565 aa9.62□□□□□ -0.87
CLSTN3-207ENST00000537408 OR2G3Q8NGZ4 309 aa9.62□□□□□ -0.87
CLSTN3-207ENST00000537408 TOMM40LQ969M1 308 aa9.62□□□□□ -0.87
CLSTN3-207ENST00000537408 OR8B4Q96RC9 309 aa9.62□□□□□ -0.87
CLSTN3-207ENST00000537408 TXN2Q99757 166 aa9.62□□□□□ -0.87
CLSTN3-207ENST00000537408 ZNF106Q9H2Y7 1883 aaKnown RBP9.62□□□□□ -0.87
CLSTN3-207ENST00000537408 SCN8AQ9UQD0 1980 aa9.62□□□□□ -0.87
CLSTN3-207ENST00000537408 TECTAO75443 2155 aa9.62□□□□□ -0.87
CLSTN3-207ENST00000537408 UTRNP46939 3433 aa9.62□□□□□ -0.87
CLSTN3-207ENST00000537408 IGLV3-16A0A075B6K0 115 aa9.62□□□□□ -0.87
CLSTN3-207ENST00000537408 LMO7DNF2Z398 122 aa9.62□□□□□ -0.87
CLSTN3-207ENST00000537408 K7ESF4 209 aa9.62□□□□□ -0.87
CLSTN3-207ENST00000537408 DEDDO75618 318 aa9.62□□□□□ -0.87
CLSTN3-207ENST00000537408 PIAS2O75928 621 aa9.62□□□□□ -0.87
CLSTN3-207ENST00000537408 MT-CO3P00414 261 aa9.62□□□□□ -0.87
CLSTN3-207ENST00000537408 CT45A8P0DMV1 189 aa9.62□□□□□ -0.87
CLSTN3-207ENST00000537408 CT45A9P0DMV2 189 aa9.62□□□□□ -0.87
CLSTN3-207ENST00000537408 ZNF708P17019 499 aa9.62□□□□□ -0.87
CLSTN3-207ENST00000537408 RAB11AP62491 216 aa9.62□□□□□ -0.87
CLSTN3-207ENST00000537408 CT45A2Q5DJT8 189 aa9.62□□□□□ -0.87
CLSTN3-207ENST00000537408 GLYATL3Q5SZD4 288 aa9.62□□□□□ -0.87
CLSTN3-207ENST00000537408 GPR157Q5UAW9 335 aa9.62□□□□□ -0.87
CLSTN3-207ENST00000537408 SLC16A9Q7RTY1 509 aa9.62□□□□□ -0.87
CLSTN3-207ENST00000537408 ZNF761Q86XN6 746 aaPredicted RBP9.62□□□□□ -0.87
CLSTN3-207ENST00000537408 TGIF2LYQ8IUE0 185 aa9.62□□□□□ -0.87
CLSTN3-207ENST00000537408 ZNF595Q8IYB9 648 aa9.62□□□□□ -0.87
CLSTN3-207ENST00000537408 PLPP7Q8NBV4 271 aa9.62□□□□□ -0.87
CLSTN3-207ENST00000537408 ALG14Q96F25 216 aa9.62□□□□□ -0.87
CLSTN3-207ENST00000537408 NUDT9Q9BW91 350 aa9.62□□□□□ -0.87
CLSTN3-207ENST00000537408 KIR3DX1Q9H7L2 352 aa9.62□□□□□ -0.87
CLSTN3-207ENST00000537408 ZNF430Q9H8G1 570 aaPredicted RBP9.62□□□□□ -0.87
CLSTN3-207ENST00000537408 SCDO00767 359 aa9.62□□□□□ -0.87
CLSTN3-207ENST00000537408 THY1P04216 161 aa9.62□□□□□ -0.87
CLSTN3-207ENST00000537408 FPR2P25090 351 aa9.62□□□□□ -0.87
CLSTN3-207ENST00000537408 SLC25A1P53007 311 aa9.62□□□□□ -0.87
CLSTN3-207ENST00000537408 DCAF12Q5T6F0 453 aa9.62□□□□□ -0.87
CLSTN3-207ENST00000537408 TMEM215Q68D42 235 aa9.62□□□□□ -0.87
CLSTN3-207ENST00000537408 RTL6Q6ICC9 239 aa9.62□□□□□ -0.87
CLSTN3-207ENST00000537408 LRP11Q86VZ4 500 aa9.62□□□□□ -0.87
CLSTN3-207ENST00000537408 TMEM170AQ8WVE7 144 aa9.62□□□□□ -0.87
CLSTN3-207ENST00000537408 PLK3Q9H4B4 646 aa9.62□□□□□ -0.87
CLSTN3-207ENST00000537408 IL19Q9UHD0 177 aa9.62□□□□□ -0.87
CLSTN3-207ENST00000537408 SPTY2D1-AS1A0A0U1RR47 76 aa9.62□□□□□ -0.87
CLSTN3-207ENST00000537408 FIGNL2A6NMB9 653 aa9.62□□□□□ -0.87
CLSTN3-207ENST00000537408 A8MVM7 634 aa9.62□□□□□ -0.87
CLSTN3-207ENST00000537408 CDC34P49427 236 aaPredicted RBP9.62□□□□□ -0.87
CLSTN3-207ENST00000537408 HNRNPA3P51991 378 aaKnown RBP9.62□□□□□ -0.87
CLSTN3-207ENST00000537408 TRA2BP62995 288 aaKnown RBP9.62□□□□□ -0.87
CLSTN3-207ENST00000537408 P2RY6Q15077 328 aa9.62□□□□□ -0.87
CLSTN3-207ENST00000537408 ZNF506Q5JVG8 444 aa9.62□□□□□ -0.87
CLSTN3-207ENST00000537408 ZNF880Q6PDB4 577 aa9.62□□□□□ -0.87
CLSTN3-207ENST00000537408 OR2I1PQ8NGU4 316 aa9.62□□□□□ -0.87
CLSTN3-207ENST00000537408 GRHL3Q8TE85 626 aa9.62□□□□□ -0.87
CLSTN3-207ENST00000537408 RBKSQ9H477 322 aa9.62□□□□□ -0.87
CLSTN3-207ENST00000537408 FRRS1LQ9P0K9 344 aa9.62□□□□□ -0.87
CLSTN3-207ENST00000537408 PAM16Q9Y3D7 125 aa9.62□□□□□ -0.87
CLSTN3-207ENST00000537408 CACNA1EQ15878 2313 aa9.62□□□□□ -0.87
CLSTN3-207ENST00000537408 BMP5P22003 454 aa9.61□□□□□ -0.87
CLSTN3-207ENST00000537408 CFPP27918 469 aa9.61□□□□□ -0.87
CLSTN3-207ENST00000537408 VAMP3Q15836 100 aa9.61□□□□□ -0.87
CLSTN3-207ENST00000537408 ASCL5Q7RTU5 278 aa9.61□□□□□ -0.87
CLSTN3-207ENST00000537408 NUP54Q7Z3B4 507 aa9.61□□□□□ -0.87
CLSTN3-207ENST00000537408 COMMD2Q86X83 199 aa9.61□□□□□ -0.87
CLSTN3-207ENST00000537408 DNASE2BQ8WZ79 361 aa9.61□□□□□ -0.87
CLSTN3-207ENST00000537408 TIMM29Q9BSF4 260 aa9.61□□□□□ -0.87
CLSTN3-207ENST00000537408 SRPK3Q9UPE1 567 aa9.61□□□□□ -0.87
CLSTN3-207ENST00000537408 MED19A0JLT2 244 aaPredicted RBP9.61□□□□□ -0.87
CLSTN3-207ENST00000537408 FEZF1A0PJY2 475 aa9.61□□□□□ -0.87
CLSTN3-207ENST00000537408 RPS4Y1P22090 263 aaKnown RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms