RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 FAM71F1Q96KD3 344 aaPredicted RBP7.14□□□□□ -1.27
CSDE1-214ENST00000530886 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.14□□□□□ -1.27
CSDE1-214ENST00000530886 RPH3ALQ9UNE2 315 aa7.14□□□□□ -1.27
CSDE1-214ENST00000530886 MYO15AQ9UKN7 3530 aa7.14□□□□□ -1.27
CSDE1-214ENST00000530886 IGHV2OR16-5A0A0B4J2B6 119 aa7.14□□□□□ -1.27
CSDE1-214ENST00000530886 PROB1E7EW31 1015 aa7.14□□□□□ -1.27
CSDE1-214ENST00000530886 EOMESO95936 686 aa7.14□□□□□ -1.27
CSDE1-214ENST00000530886 HRASP01112 189 aa7.14□□□□□ -1.27
CSDE1-214ENST00000530886 IGHEP01854 428 aa7.14□□□□□ -1.27
CSDE1-214ENST00000530886 CTSDP07339 412 aaPredicted RBP7.14□□□□□ -1.27
CSDE1-214ENST00000530886 C8orf89P0DMQ9 161 aa7.14□□□□□ -1.27
CSDE1-214ENST00000530886 HOXB2P14652 356 aa7.14□□□□□ -1.27
CSDE1-214ENST00000530886 CCR5P51681 352 aa7.14□□□□□ -1.27
CSDE1-214ENST00000530886 RAB38P57729 211 aa7.14□□□□□ -1.27
CSDE1-214ENST00000530886 GPR18Q14330 331 aa7.14□□□□□ -1.27
CSDE1-214ENST00000530886 AMZ2Q86W34 360 aa7.14□□□□□ -1.27
CSDE1-214ENST00000530886 OR2AJ1Q8NGZ0 328 aa7.14□□□□□ -1.27
CSDE1-214ENST00000530886 CIB3Q96Q77 187 aaPredicted RBP7.14□□□□□ -1.27
CSDE1-214ENST00000530886 VN1R3Q9BXE9 311 aa7.14□□□□□ -1.27
CSDE1-214ENST00000530886 HCSTQ9UBK5 93 aa7.14□□□□□ -1.27
CSDE1-214ENST00000530886 PHF3Q92576 2039 aaKnown RBP7.13□□□□□ -1.27
CSDE1-214ENST00000530886 C4orf47A7E2U8 309 aa7.13□□□□□ -1.27
CSDE1-214ENST00000530886 WDR1O75083 606 aa7.13□□□□□ -1.27
CSDE1-214ENST00000530886 VSIG8P0DPA2 414 aa7.13□□□□□ -1.27
CSDE1-214ENST00000530886 BMP5P22003 454 aa7.13□□□□□ -1.27
CSDE1-214ENST00000530886 GLRA1P23415 457 aa7.13□□□□□ -1.27
CSDE1-214ENST00000530886 ARR3P36575 388 aa7.13□□□□□ -1.27
CSDE1-214ENST00000530886 EFNA3P52797 238 aa7.13□□□□□ -1.27
CSDE1-214ENST00000530886 LRRC25Q8N386 305 aaPredicted RBP7.13□□□□□ -1.27
CSDE1-214ENST00000530886 ARHGEF39Q8N4T4 335 aa7.13□□□□□ -1.27
CSDE1-214ENST00000530886 CHST4Q8NCG5 386 aa7.13□□□□□ -1.27
CSDE1-214ENST00000530886 OR10S1Q8NGN2 331 aa7.13□□□□□ -1.27
CSDE1-214ENST00000530886 ZNF514Q96K75 400 aaPredicted RBP7.13□□□□□ -1.27
CSDE1-214ENST00000530886 VAMP8Q9BV40 100 aa7.13□□□□□ -1.27
CSDE1-214ENST00000530886 ELOVL3Q9HB03 270 aa7.13□□□□□ -1.27
CSDE1-214ENST00000530886 DNAJB12Q9NXW2 375 aaKnown RBP7.13□□□□□ -1.27
CSDE1-214ENST00000530886 ZNF581Q9P0T4 197 aa7.13□□□□□ -1.27
CSDE1-214ENST00000530886 NAT8Q9UHE5 227 aa7.13□□□□□ -1.27
CSDE1-214ENST00000530886 C19orf53Q9UNZ5 99 aaPredicted RBP7.13□□□□□ -1.27
CSDE1-214ENST00000530886 LAMP3Q9UQV4 416 aa7.13□□□□□ -1.27
CSDE1-214ENST00000530886 C14orf166Q9Y224 244 aaKnown RBP7.13□□□□□ -1.27
CSDE1-214ENST00000530886 DOCK9Q9BZ29 2069 aa7.13□□□□□ -1.27
CSDE1-214ENST00000530886 ZNF705FA8MVS1 300 aaPredicted RBP7.13□□□□□ -1.27
CSDE1-214ENST00000530886 PNPP00491 289 aa7.13□□□□□ -1.27
CSDE1-214ENST00000530886 ZNF705DP0CH99 300 aaPredicted RBP7.13□□□□□ -1.27
CSDE1-214ENST00000530886 ZNF705BP0CI00 300 aaPredicted RBP7.13□□□□□ -1.27
CSDE1-214ENST00000530886 ZNF41P51814 821 aaPredicted RBP7.13□□□□□ -1.27
CSDE1-214ENST00000530886 FAM189A2Q15884 450 aa7.13□□□□□ -1.27
CSDE1-214ENST00000530886 CYP2G1PQ6ZSU1 146 aa7.13□□□□□ -1.27
CSDE1-214ENST00000530886 TCF24Q7RTU0 167 aa7.13□□□□□ -1.27
CSDE1-214ENST00000530886 C12orf76Q8N812 135 aaPredicted RBP7.13□□□□□ -1.27
CSDE1-214ENST00000530886 MRPL24Q96A35 216 aaKnown RBP7.13□□□□□ -1.27
CSDE1-214ENST00000530886 ANAPC16Q96DE5 110 aa7.13□□□□□ -1.27
CSDE1-214ENST00000530886 RASL10BQ96S79 203 aa7.13□□□□□ -1.27
CSDE1-214ENST00000530886 CALHM2Q9HA72 323 aa7.13□□□□□ -1.27
CSDE1-214ENST00000530886 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.13□□□□□ -1.27
CSDE1-214ENST00000530886 MRPL27Q9P0M9 148 aaKnown RBP7.13□□□□□ -1.27
CSDE1-214ENST00000530886 DCDC2BA2VCK2 349 aa7.13□□□□□ -1.27
CSDE1-214ENST00000530886 NPIPA2E9PIF3 369 aa7.13□□□□□ -1.27
CSDE1-214ENST00000530886 CTXN2P0C2S0 81 aa7.13□□□□□ -1.27
CSDE1-214ENST00000530886 BCL2P10415 239 aa7.13□□□□□ -1.27
CSDE1-214ENST00000530886 HIST1H1DP16402 221 aaKnown RBP7.13□□□□□ -1.27
CSDE1-214ENST00000530886 SFTPDP35247 375 aa7.13□□□□□ -1.27
CSDE1-214ENST00000530886 RPL15P61313 204 aaKnown RBP7.13□□□□□ -1.27
CSDE1-214ENST00000530886 EWSR1Q01844 656 aaKnown RBP eCLIP7.13□□□□□ -1.27
CSDE1-214ENST00000530886 MESP2Q0VG99 397 aa7.13□□□□□ -1.27
CSDE1-214ENST00000530886 CCL14Q16627 93 aa7.13□□□□□ -1.27
CSDE1-214ENST00000530886 FBLN7Q53RD9 439 aa7.13□□□□□ -1.27
CSDE1-214ENST00000530886 WDR25Q64LD2 544 aaPredicted RBP7.13□□□□□ -1.27
CSDE1-214ENST00000530886 C16orf82Q7Z2V1 217 aa7.13□□□□□ -1.27
CSDE1-214ENST00000530886 DPY19L4Q7Z388 723 aa7.13□□□□□ -1.27
CSDE1-214ENST00000530886 NUP54Q7Z3B4 507 aa7.13□□□□□ -1.27
CSDE1-214ENST00000530886 OR6N2Q8NGY6 317 aa7.13□□□□□ -1.27
CSDE1-214ENST00000530886 SDSLQ96GA7 329 aa7.13□□□□□ -1.27
CSDE1-214ENST00000530886 AMELYQ99218 206 aa7.13□□□□□ -1.27
CSDE1-214ENST00000530886 FBXO34Q9NWN3 711 aa7.13□□□□□ -1.27
CSDE1-214ENST00000530886 HHLA2Q9UM44 414 aa7.13□□□□□ -1.27
CSDE1-214ENST00000530886 GPR34Q9UPC5 381 aa7.13□□□□□ -1.27
CSDE1-214ENST00000530886 SLC22A13Q9Y226 551 aa7.13□□□□□ -1.27
CSDE1-214ENST00000530886 MRPS23Q9Y3D9 190 aaKnown RBP7.13□□□□□ -1.27
CSDE1-214ENST00000530886 CDH23Q9H251 3354 aa7.12□□□□□ -1.27
CSDE1-214ENST00000530886 OR6C6A6NF89 314 aa7.12□□□□□ -1.27
CSDE1-214ENST00000530886 MDKP21741 143 aaPredicted RBP7.12□□□□□ -1.27
CSDE1-214ENST00000530886 KIF26BQ2KJY2 2108 aa7.12□□□□□ -1.27
CSDE1-214ENST00000530886 OCIAD2Q56VL3 154 aa7.12□□□□□ -1.27
CSDE1-214ENST00000530886 C1orf140Q5VVS0 124 aa7.12□□□□□ -1.27
CSDE1-214ENST00000530886 SPRED2Q7Z698 418 aa7.12□□□□□ -1.27
CSDE1-214ENST00000530886 MYPOPQ86VE0 399 aaPredicted RBP7.12□□□□□ -1.27
CSDE1-214ENST00000530886 SLC22A24Q8N4F4 322 aa7.12□□□□□ -1.27
CSDE1-214ENST00000530886 CDRT4Q8N9R6 151 aa7.12□□□□□ -1.27
CSDE1-214ENST00000530886 ZFP62Q8NB50 900 aaPredicted RBP7.12□□□□□ -1.27
CSDE1-214ENST00000530886 Q8NFD4 153 aa7.12□□□□□ -1.27
CSDE1-214ENST00000530886 CTHRC1Q96CG8 243 aa7.12□□□□□ -1.27
CSDE1-214ENST00000530886 GPR146Q96CH1 333 aa7.12□□□□□ -1.27
CSDE1-214ENST00000530886 C18orf12Q96KH6 178 aa7.12□□□□□ -1.27
CSDE1-214ENST00000530886 RNF2Q99496 336 aa7.12□□□□□ -1.27
CSDE1-214ENST00000530886 ABHD14AQ9BUJ0 271 aa7.12□□□□□ -1.27
CSDE1-214ENST00000530886 ZNF552Q9H707 407 aaPredicted RBP7.12□□□□□ -1.27
CSDE1-214ENST00000530886 UQCR10Q9UDW1 63 aa7.12□□□□□ -1.27
CSDE1-214ENST00000530886 SLC7A11Q9UPY5 501 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms