RNA–Protein interactions for RNA: ENST00000530339.1

PCDHA4-203, Transcript of protocadherin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA4, Length 5,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-203ENST00000530339 RAB40CQ96S21 281 aa13.74□□□□□ -0.21
PCDHA4-203ENST00000530339 FRRS1LQ9P0K9 344 aa13.74□□□□□ -0.21
PCDHA4-203ENST00000530339 KIAA0100Q14667 2235 aaKnown RBP13.74□□□□□ -0.21
PCDHA4-203ENST00000530339 HOXB3P14651 431 aaPredicted RBP13.74□□□□□ -0.21
PCDHA4-203ENST00000530339 RFC3P40938 356 aa13.74□□□□□ -0.21
PCDHA4-203ENST00000530339 MOGAT1Q96PD6 335 aa13.74□□□□□ -0.21
PCDHA4-203ENST00000530339 BRWD1Q9NSI6 2320 aa13.74□□□□□ -0.21
PCDHA4-203ENST00000530339 OR7C2O60412 319 aa13.74□□□□□ -0.21
PCDHA4-203ENST00000530339 CT45A10P0DMU9 189 aa13.74□□□□□ -0.21
PCDHA4-203ENST00000530339 CTLA4P16410 223 aa13.74□□□□□ -0.21
PCDHA4-203ENST00000530339 ASCL1P50553 236 aa13.74□□□□□ -0.21
PCDHA4-203ENST00000530339 HYAL1Q12794 435 aa13.74□□□□□ -0.21
PCDHA4-203ENST00000530339 HLA-BQ31612 363 aa13.74□□□□□ -0.21
PCDHA4-203ENST00000530339 PRSS41Q7RTY9 318 aa13.74□□□□□ -0.21
PCDHA4-203ENST00000530339 NPEPL1Q8NDH3 523 aa13.74□□□□□ -0.21
PCDHA4-203ENST00000530339 MFRPQ9BY79 579 aa13.74□□□□□ -0.21
PCDHA4-203ENST00000530339 IGHV3-15A0A0B4J1V0 119 aa13.74□□□□□ -0.21
PCDHA4-203ENST00000530339 UBE2L5PA0A1B0GUS4 154 aa13.74□□□□□ -0.21
PCDHA4-203ENST00000530339 ANKRD37Q7Z713 158 aa13.74□□□□□ -0.21
PCDHA4-203ENST00000530339 AQP7P3A6NL99 342 aa13.73□□□□□ -0.21
PCDHA4-203ENST00000530339 CD200P41217 278 aa13.73□□□□□ -0.21
PCDHA4-203ENST00000530339 KRTDAPP60985 99 aa13.73□□□□□ -0.21
PCDHA4-203ENST00000530339 SLC25A42Q86VD7 318 aa13.73□□□□□ -0.21
PCDHA4-203ENST00000530339 WFDC8Q8IUA0 241 aa13.73□□□□□ -0.21
PCDHA4-203ENST00000530339 KIAA1456Q9P272 454 aa13.73□□□□□ -0.21
PCDHA4-203ENST00000530339 ZMAT5Q9UDW3 170 aaKnown RBP13.73□□□□□ -0.21
PCDHA4-203ENST00000530339 COL5A3P25940 1745 aaPredicted RBP13.73□□□□□ -0.21
PCDHA4-203ENST00000530339 TNFSF14O43557 240 aa13.73□□□□□ -0.21
PCDHA4-203ENST00000530339 CNIH1O95406 144 aa13.73□□□□□ -0.21
PCDHA4-203ENST00000530339 VAMP3Q15836 100 aa13.73□□□□□ -0.21
PCDHA4-203ENST00000530339 TMEM241Q24JQ0 296 aa13.73□□□□□ -0.21
PCDHA4-203ENST00000530339 NUFIP2Q7Z417 695 aaKnown RBP13.73□□□□□ -0.21
PCDHA4-203ENST00000530339 NPAS1Q99742 590 aa13.73□□□□□ -0.21
PCDHA4-203ENST00000530339 COMMD5Q9GZQ3 224 aa13.73□□□□□ -0.21
PCDHA4-203ENST00000530339 IGHV1OR21-1A0A087WYE8 117 aa13.73□□□□□ -0.21
PCDHA4-203ENST00000530339 ERVH48-1M5A8F1 160 aa13.73□□□□□ -0.21
PCDHA4-203ENST00000530339 CHEK1O14757 476 aa13.73□□□□□ -0.21
PCDHA4-203ENST00000530339 CTRB1P17538 263 aa13.73□□□□□ -0.21
PCDHA4-203ENST00000530339 CTRB2Q6GPI1 263 aa13.73□□□□□ -0.21
PCDHA4-203ENST00000530339 ADPRHL1Q8NDY3 354 aa13.73□□□□□ -0.21
PCDHA4-203ENST00000530339 TRAPPC1Q9Y5R8 145 aa13.73□□□□□ -0.21
PCDHA4-203ENST00000530339 MTCH2Q9Y6C9 303 aa13.73□□□□□ -0.21
PCDHA4-203ENST00000530339 FOCADQ5VW36 1801 aa13.73□□□□□ -0.21
PCDHA4-203ENST00000530339 A0A096LPE4 126 aa13.73□□□□□ -0.21
PCDHA4-203ENST00000530339 A0A1W2PPZ6 126 aa13.73□□□□□ -0.21
PCDHA4-203ENST00000530339 ZNF98A6NK75 572 aa13.73□□□□□ -0.21
PCDHA4-203ENST00000530339 OR4C45A6NMZ5 311 aa13.73□□□□□ -0.21
PCDHA4-203ENST00000530339 MT-CO3P00414 261 aa13.73□□□□□ -0.21
PCDHA4-203ENST00000530339 DRD3P35462 400 aa13.73□□□□□ -0.21
PCDHA4-203ENST00000530339 LIMK1P53667 647 aa13.73□□□□□ -0.21
PCDHA4-203ENST00000530339 TMEM211Q6ICI0 200 aa13.73□□□□□ -0.21
PCDHA4-203ENST00000530339 OR10X1Q8NGY0 326 aa13.73□□□□□ -0.21
PCDHA4-203ENST00000530339 GPA33Q99795 319 aa13.73□□□□□ -0.21
PCDHA4-203ENST00000530339 VAMP8Q9BV40 100 aa13.73□□□□□ -0.21
PCDHA4-203ENST00000530339 XKRY2A2RUG3 117 aa13.72□□□□□ -0.21
PCDHA4-203ENST00000530339 PLPP3O14495 311 aa13.72□□□□□ -0.21
PCDHA4-203ENST00000530339 RER1O15258 196 aa13.72□□□□□ -0.21
PCDHA4-203ENST00000530339 ZNF345Q14585 488 aa13.72□□□□□ -0.21
PCDHA4-203ENST00000530339 IGSF11Q5DX21 431 aa13.72□□□□□ -0.21
PCDHA4-203ENST00000530339 ZNF770Q6IQ21 691 aaPredicted RBP13.72□□□□□ -0.21
PCDHA4-203ENST00000530339 CLEC18BQ6UXF7 455 aa13.72□□□□□ -0.21
PCDHA4-203ENST00000530339 RPS4Y2Q8TD47 263 aa13.72□□□□□ -0.21
PCDHA4-203ENST00000530339 ZDHHC16Q969W1 377 aa13.72□□□□□ -0.21
PCDHA4-203ENST00000530339 FLRT3Q9NZU0 649 aa13.72□□□□□ -0.21
PCDHA4-203ENST00000530339 PCDHGA9Q9Y5G4 932 aaKnown RBP13.72□□□□□ -0.21
PCDHA4-203ENST00000530339 HLA-DRB3P79483 266 aa13.72□□□□□ -0.21
PCDHA4-203ENST00000530339 LSM11P83369 360 aaKnown RBP eCLIP13.72□□□□□ -0.21
PCDHA4-203ENST00000530339 C6orf201Q7Z4U5 140 aa13.72□□□□□ -0.21
PCDHA4-203ENST00000530339 KCNK15Q9H427 330 aa13.72□□□□□ -0.21
PCDHA4-203ENST00000530339 FAM24AA6NFZ4 105 aa13.72□□□□□ -0.21
PCDHA4-203ENST00000530339 M0QZ24 198 aa13.72□□□□□ -0.21
PCDHA4-203ENST00000530339 LINC01565O15544 149 aa13.72□□□□□ -0.21
PCDHA4-203ENST00000530339 CT62P0C5K7 136 aa13.72□□□□□ -0.21
PCDHA4-203ENST00000530339 OR3A4PP47883 348 aa13.72□□□□□ -0.21
PCDHA4-203ENST00000530339 OR1L3Q8NH93 324 aa13.72□□□□□ -0.21
PCDHA4-203ENST00000530339 MBD1Q9UIS9 605 aaPredicted RBP13.72□□□□□ -0.21
PCDHA4-203ENST00000530339 ADAM20O43506 726 aa13.72□□□□□ -0.21
PCDHA4-203ENST00000530339 NTN1O95631 604 aa13.72□□□□□ -0.21
PCDHA4-203ENST00000530339 ZNF17P17021 662 aa13.72□□□□□ -0.21
PCDHA4-203ENST00000530339 RGS7BPQ6MZT1 257 aaPredicted RBP13.72□□□□□ -0.21
PCDHA4-203ENST00000530339 TOMM20LQ6UXN7 152 aa13.72□□□□□ -0.21
PCDHA4-203ENST00000530339 OR6X1Q8NH79 312 aa13.72□□□□□ -0.21
PCDHA4-203ENST00000530339 CLCF1Q9UBD9 225 aa13.72□□□□□ -0.21
PCDHA4-203ENST00000530339 ELOA3CA0A087WX78 387 aaPredicted RBP13.71□□□□□ -0.21
PCDHA4-203ENST00000530339 CTSDP07339 412 aaPredicted RBP13.71□□□□□ -0.21
PCDHA4-203ENST00000530339 GNB2P62879 340 aa13.71□□□□□ -0.21
PCDHA4-203ENST00000530339 SPEM2Q0P670 501 aa13.71□□□□□ -0.21
PCDHA4-203ENST00000530339 PNRC1Q12796 327 aaPredicted RBP13.71□□□□□ -0.21
PCDHA4-203ENST00000530339 CBLN3Q6UW01 205 aa13.71□□□□□ -0.21
PCDHA4-203ENST00000530339 SSX7Q7RTT5 188 aa13.71□□□□□ -0.21
PCDHA4-203ENST00000530339 FAAP24Q9BTP7 215 aa13.71□□□□□ -0.21
PCDHA4-203ENST00000530339 ALX4Q9H161 411 aaPredicted RBP13.71□□□□□ -0.21
PCDHA4-203ENST00000530339 PARD6AQ9NPB6 346 aa13.71□□□□□ -0.21
PCDHA4-203ENST00000530339 PCOLCE2Q9UKZ9 415 aa13.71□□□□□ -0.21
PCDHA4-203ENST00000530339 C3orf85A0A1B0GTC6 90 aa13.71□□□□□ -0.21
PCDHA4-203ENST00000530339 MAP1LC3B2A6NCE7 125 aa13.71□□□□□ -0.21
PCDHA4-203ENST00000530339 RBFOX3A6NFN3 312 aa13.71□□□□□ -0.21
PCDHA4-203ENST00000530339 OR5AC1P0C628 307 aa13.71□□□□□ -0.21
PCDHA4-203ENST00000530339 SRD5A2P31213 254 aa13.71□□□□□ -0.21
PCDHA4-203ENST00000530339 GALR1P47211 349 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms