RNA–Protein interactions for RNA: ENST00000530008.1

CAPRIN1-208, Transcript of cell cycle associated protein 1, humanhuman

TSL 4

Gene CAPRIN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-208ENST00000530008 DIABLOQ9NR28 239 aa4.06□□□□□ -1.76
CAPRIN1-208ENST00000530008 SLC22A14Q9Y267 594 aa4.06□□□□□ -1.76
CAPRIN1-208ENST00000530008 BRCA1P38398 1863 aaKnown RBP4.06□□□□□ -1.76
CAPRIN1-208ENST00000530008 IGSF9BQ9UPX0 1349 aa4.05□□□□□ -1.76
CAPRIN1-208ENST00000530008 OR2AT4A6NND4 320 aa4.05□□□□□ -1.76
CAPRIN1-208ENST00000530008 UBDO15205 165 aa4.05□□□□□ -1.76
CAPRIN1-208ENST00000530008 VAMP5O95183 116 aa4.05□□□□□ -1.76
CAPRIN1-208ENST00000530008 C1GALT1C1LP0DN25 315 aa4.05□□□□□ -1.76
CAPRIN1-208ENST00000530008 TAC1P20366 129 aa4.05□□□□□ -1.76
CAPRIN1-208ENST00000530008 TTPAP49638 278 aa4.05□□□□□ -1.76
CAPRIN1-208ENST00000530008 TMEM249Q2WGJ8 235 aa4.05□□□□□ -1.76
CAPRIN1-208ENST00000530008 ZFP1Q6P2D0 407 aa4.05□□□□□ -1.76
CAPRIN1-208ENST00000530008 LINC00337Q8N6G1 96 aa4.05□□□□□ -1.76
CAPRIN1-208ENST00000530008 ACBD4Q8NC06 268 aa4.05□□□□□ -1.76
CAPRIN1-208ENST00000530008 C7orf50Q9BRJ6 194 aaKnown RBP4.05□□□□□ -1.76
CAPRIN1-208ENST00000530008 ZNF649Q9BS31 505 aa4.05□□□□□ -1.76
CAPRIN1-208ENST00000530008 ZNF430Q9H8G1 570 aaPredicted RBP4.05□□□□□ -1.76
CAPRIN1-208ENST00000530008 C1orf109Q9NX04 203 aa4.05□□□□□ -1.76
CAPRIN1-208ENST00000530008 RAB22AQ9UL26 194 aa4.05□□□□□ -1.76
CAPRIN1-208ENST00000530008 IGHV3-49A0A0A0MS15 119 aa4.04□□□□□ -1.76
CAPRIN1-208ENST00000530008 C1orf232A0A0U1RR37 186 aa4.04□□□□□ -1.76
CAPRIN1-208ENST00000530008 FABP12A6NFH5 140 aa4.04□□□□□ -1.76
CAPRIN1-208ENST00000530008 RBFOX3A6NFN3 312 aa4.04□□□□□ -1.76
CAPRIN1-208ENST00000530008 UPK1AO00322 258 aa4.04□□□□□ -1.76
CAPRIN1-208ENST00000530008 ITGB1BP1O14713 200 aa4.04□□□□□ -1.76
CAPRIN1-208ENST00000530008 FABP7O15540 132 aa4.04□□□□□ -1.76
CAPRIN1-208ENST00000530008 AQP9O43315 295 aa4.04□□□□□ -1.76
CAPRIN1-208ENST00000530008 OCMP0CE72 109 aaPredicted RBP4.04□□□□□ -1.76
CAPRIN1-208ENST00000530008 GCLMP48507 274 aa4.04□□□□□ -1.76
CAPRIN1-208ENST00000530008 SLC18A1P54219 525 aa4.04□□□□□ -1.76
CAPRIN1-208ENST00000530008 BAXQ07812 192 aa4.04□□□□□ -1.76
CAPRIN1-208ENST00000530008 NANOGP8Q6NSW7 305 aa4.04□□□□□ -1.76
CAPRIN1-208ENST00000530008 SAXO1Q8IYX7 474 aa4.04□□□□□ -1.76
CAPRIN1-208ENST00000530008 OR5T1Q8NG75 326 aa4.04□□□□□ -1.76
CAPRIN1-208ENST00000530008 LINC01560Q8TB33 94 aa4.04□□□□□ -1.76
CAPRIN1-208ENST00000530008 SYNPRQ8TBG9 265 aa4.04□□□□□ -1.76
CAPRIN1-208ENST00000530008 DDI1Q8WTU0 396 aa4.04□□□□□ -1.76
CAPRIN1-208ENST00000530008 C22orf15Q8WYQ4 148 aa4.04□□□□□ -1.76
CAPRIN1-208ENST00000530008 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.04□□□□□ -1.763e-6■■■■■ 50.8
CAPRIN1-208ENST00000530008 ARL5BQ96KC2 179 aa4.04□□□□□ -1.76
CAPRIN1-208ENST00000530008 BIRC8Q96P09 236 aa4.04□□□□□ -1.76
CAPRIN1-208ENST00000530008 HBEGFQ99075 208 aa4.04□□□□□ -1.76
CAPRIN1-208ENST00000530008 TBL1YQ9BQ87 522 aa4.04□□□□□ -1.76
CAPRIN1-208ENST00000530008 MRPL20Q9BYC9 149 aaKnown RBP4.04□□□□□ -1.76
CAPRIN1-208ENST00000530008 SDHAF3Q9NRP4 125 aa4.04□□□□□ -1.76
CAPRIN1-208ENST00000530008 ENOPH1Q9UHY7 261 aa4.04□□□□□ -1.76
CAPRIN1-208ENST00000530008 ZNF646O15015 1829 aaPredicted RBP4.04□□□□□ -1.76
CAPRIN1-208ENST00000530008 KIAA0232Q92628 1395 aa4.03□□□□□ -1.76
CAPRIN1-208ENST00000530008 TDRD6O60522 2096 aaKnown RBP4.03□□□□□ -1.76
CAPRIN1-208ENST00000530008 A0A0G2JMP0 313 aa4.03□□□□□ -1.76
CAPRIN1-208ENST00000530008 A0A0X1KG70 313 aa4.03□□□□□ -1.76
CAPRIN1-208ENST00000530008 A0A1B0GVY2 172 aa4.03□□□□□ -1.76
CAPRIN1-208ENST00000530008 CENPBD1B2RD01 187 aa4.03□□□□□ -1.76
CAPRIN1-208ENST00000530008 HLA-DQB1P01920 261 aa4.03□□□□□ -1.76
CAPRIN1-208ENST00000530008 IGKV5-2P06315 115 aa4.03□□□□□ -1.76
CAPRIN1-208ENST00000530008 OR4Q2P0C623 313 aa4.03□□□□□ -1.76
CAPRIN1-208ENST00000530008 ACTBL2Q562R1 376 aa4.03□□□□□ -1.76
CAPRIN1-208ENST00000530008 AP1ARQ63HQ0 302 aa4.03□□□□□ -1.76
CAPRIN1-208ENST00000530008 PLEKHG7Q6ZR37 379 aa4.03□□□□□ -1.76
CAPRIN1-208ENST00000530008 CYP4Z2PQ8N1L4 340 aa4.03□□□□□ -1.76
CAPRIN1-208ENST00000530008 SLC25A29Q8N8R3 303 aa4.03□□□□□ -1.76
CAPRIN1-208ENST00000530008 Q8N9L7 120 aa4.03□□□□□ -1.76
CAPRIN1-208ENST00000530008 NECAP1Q8NC96 275 aa4.03□□□□□ -1.76
CAPRIN1-208ENST00000530008 OR5AK3PQ8NH89 298 aa4.03□□□□□ -1.76
CAPRIN1-208ENST00000530008 ACTL9Q8TC94 416 aa4.03□□□□□ -1.76
CAPRIN1-208ENST00000530008 CHCHD7Q9BUK0 85 aa4.03□□□□□ -1.76
CAPRIN1-208ENST00000530008 LHX5Q9H2C1 402 aa4.03□□□□□ -1.76
CAPRIN1-208ENST00000530008 ASCL3Q9NQ33 180 aa4.03□□□□□ -1.76
CAPRIN1-208ENST00000530008 RBM22Q9NW64 420 aaKnown RBP eCLIP4.03□□□□□ -1.76
CAPRIN1-208ENST00000530008 YTHDF2Q9Y5A9 579 aaKnown RBP4.03□□□□□ -1.76
CAPRIN1-208ENST00000530008 PTPRTO14522 1441 aa4.03□□□□□ -1.76
CAPRIN1-208ENST00000530008 ELP1O95163 1332 aa4.02□□□□□ -1.77
CAPRIN1-208ENST00000530008 CDK1P06493 297 aa4.02□□□□□ -1.77
CAPRIN1-208ENST00000530008 LIMS3P0CW19 117 aa4.02□□□□□ -1.77
CAPRIN1-208ENST00000530008 LIMS4P0CW20 117 aa4.02□□□□□ -1.77
CAPRIN1-208ENST00000530008 PIGHQ14442 188 aaPredicted RBP4.02□□□□□ -1.77
CAPRIN1-208ENST00000530008 DMC1Q14565 340 aa4.02□□□□□ -1.77
CAPRIN1-208ENST00000530008 ZNHIT3Q15649 155 aaPredicted RBP4.02□□□□□ -1.77
CAPRIN1-208ENST00000530008 USP50Q70EL3 339 aaPredicted RBP4.02□□□□□ -1.77
CAPRIN1-208ENST00000530008 ATP6V1C2Q8NEY4 427 aa4.02□□□□□ -1.77
CAPRIN1-208ENST00000530008 OR5M1Q8NGP8 315 aa4.02□□□□□ -1.77
CAPRIN1-208ENST00000530008 UBALD1Q8TB05 177 aa4.02□□□□□ -1.77
CAPRIN1-208ENST00000530008 FAM45AQ8TCE6 357 aa4.02□□□□□ -1.77
CAPRIN1-208ENST00000530008 DYNC2LI1Q8TCX1 351 aa4.02□□□□□ -1.77
CAPRIN1-208ENST00000530008 ORAOV1Q8WV07 137 aa4.02□□□□□ -1.77
CAPRIN1-208ENST00000530008 CPNE4Q96A23 557 aaPredicted RBP4.02□□□□□ -1.77
CAPRIN1-208ENST00000530008 FOPNLQ96NB1 174 aa4.02□□□□□ -1.77
CAPRIN1-208ENST00000530008 PITX2Q99697 317 aa4.02□□□□□ -1.77
CAPRIN1-208ENST00000530008 TBL1XR1Q9BZK7 514 aa4.02□□□□□ -1.77
CAPRIN1-208ENST00000530008 VCXQ9H320 206 aa4.02□□□□□ -1.77
CAPRIN1-208ENST00000530008 WDR54Q9H977 334 aa4.02□□□□□ -1.77
CAPRIN1-208ENST00000530008 PARVGQ9HBI0 331 aa4.02□□□□□ -1.77
CAPRIN1-208ENST00000530008 CA10Q9NS85 328 aa4.02□□□□□ -1.77
CAPRIN1-208ENST00000530008 TAS2R13Q9NYV9 303 aa4.02□□□□□ -1.77
CAPRIN1-208ENST00000530008 PSMD13Q9UNM6 376 aa4.02□□□□□ -1.77
CAPRIN1-208ENST00000530008 KLF13Q9Y2Y9 288 aaPredicted RBP4.02□□□□□ -1.77
CAPRIN1-208ENST00000530008 ADAMTSL3P82987 1691 aa4.01□□□□□ -1.77
CAPRIN1-208ENST00000530008 LOC102724200A0A096LPH7 203 aaPredicted RBP4.01□□□□□ -1.77
CAPRIN1-208ENST00000530008 A0A1B0GXF2 115 aa4.01□□□□□ -1.77
CAPRIN1-208ENST00000530008 TMEM72A0PK05 275 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms