RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 SIGLEC16A6NMB1 481 aa2.42□□□□□ -2.02
TOPBP1-206ENST00000508524 C4orf51C9J302 202 aa2.42□□□□□ -2.02
TOPBP1-206ENST00000508524 INS-IGF2F8WCM5 200 aa2.42□□□□□ -2.02
TOPBP1-206ENST00000508524 RGS16O15492 202 aaPredicted RBP2.42□□□□□ -2.02
TOPBP1-206ENST00000508524 CLOCKO15516 846 aa2.42□□□□□ -2.02
TOPBP1-206ENST00000508524 BCAS1O75363 584 aaPredicted RBP2.42□□□□□ -2.02
TOPBP1-206ENST00000508524 SRP72O76094 671 aaKnown RBP2.42□□□□□ -2.02
TOPBP1-206ENST00000508524 MFN2O95140 757 aa2.42□□□□□ -2.02
TOPBP1-206ENST00000508524 MPZL1O95297 269 aa2.42□□□□□ -2.02
TOPBP1-206ENST00000508524 AP2A1O95782 977 aa2.42□□□□□ -2.02
TOPBP1-206ENST00000508524 AK1P00568 194 aa2.42□□□□□ -2.02
TOPBP1-206ENST00000508524 ANXA5P08758 320 aa2.42□□□□□ -2.02
TOPBP1-206ENST00000508524 ADRA2AP08913 450 aa2.42□□□□□ -2.02
TOPBP1-206ENST00000508524 MIPP30301 263 aa2.42□□□□□ -2.02
TOPBP1-206ENST00000508524 HCAR3P49019 387 aa2.42□□□□□ -2.02
TOPBP1-206ENST00000508524 SSR4P51571 173 aa2.42□□□□□ -2.02
TOPBP1-206ENST00000508524 NDUFA8P51970 172 aa2.42□□□□□ -2.02
TOPBP1-206ENST00000508524 GBE1Q04446 702 aa2.42□□□□□ -2.02
TOPBP1-206ENST00000508524 PNOCQ13519 176 aa2.42□□□□□ -2.02
TOPBP1-206ENST00000508524 OXA1LQ15070 435 aa2.42□□□□□ -2.02
TOPBP1-206ENST00000508524 TTLL9Q3SXZ7 439 aa2.42□□□□□ -2.02
TOPBP1-206ENST00000508524 NCBP2-AS2Q69YL0 99 aa2.42□□□□□ -2.02
TOPBP1-206ENST00000508524 CLEC2AQ6UVW9 174 aa2.42□□□□□ -2.02
TOPBP1-206ENST00000508524 SBSNQ6UWP8 590 aa2.42□□□□□ -2.02
TOPBP1-206ENST00000508524 RGS9BPQ6ZS82 235 aa2.42□□□□□ -2.02
TOPBP1-206ENST00000508524 PIANPQ8IYJ0 282 aa2.42□□□□□ -2.02
TOPBP1-206ENST00000508524 TBC1D21Q8IYX1 336 aa2.42□□□□□ -2.02
TOPBP1-206ENST00000508524 PLPP5Q8NEB5 264 aa2.42□□□□□ -2.02
TOPBP1-206ENST00000508524 C22orf15Q8WYQ4 148 aa2.42□□□□□ -2.02
TOPBP1-206ENST00000508524 IMP4Q96G21 291 aaKnown RBP2.42□□□□□ -2.02
TOPBP1-206ENST00000508524 CHAC1Q9BUX1 264 aa2.42□□□□□ -2.02
TOPBP1-206ENST00000508524 ZNF355PQ9NSJ1 428 aa2.42□□□□□ -2.02
TOPBP1-206ENST00000508524 HPF1Q9NWY4 346 aa2.42□□□□□ -2.02
TOPBP1-206ENST00000508524 SPATA7Q9P0W8 599 aa2.42□□□□□ -2.02
TOPBP1-206ENST00000508524 ARL5AQ9Y689 179 aa2.42□□□□□ -2.02
TOPBP1-206ENST00000508524 PLXNB1O43157 2135 aa2.42□□□□□ -2.02
TOPBP1-206ENST00000508524 ARFGEF3Q5TH69 2177 aa2.42□□□□□ -2.02
TOPBP1-206ENST00000508524 LCE6AA0A183 80 aa2.41□□□□□ -2.02
TOPBP1-206ENST00000508524 DPRXA6NFQ7 191 aa2.41□□□□□ -2.02
TOPBP1-206ENST00000508524 H0YC42 278 aa2.41□□□□□ -2.02
TOPBP1-206ENST00000508524 H3BNH8 94 aa2.41□□□□□ -2.02
TOPBP1-206ENST00000508524 XKRYO14609 159 aa2.41□□□□□ -2.02
TOPBP1-206ENST00000508524 MYO1DO94832 1006 aa2.41□□□□□ -2.02
TOPBP1-206ENST00000508524 NSA2O95478 260 aaKnown RBP2.41□□□□□ -2.02
TOPBP1-206ENST00000508524 YEATS4O95619 227 aa2.41□□□□□ -2.02
TOPBP1-206ENST00000508524 PNMTP11086 282 aa2.41□□□□□ -2.02
TOPBP1-206ENST00000508524 ATP1B2P14415 290 aaPredicted RBP2.41□□□□□ -2.02
TOPBP1-206ENST00000508524 MAPK3P27361 379 aaPredicted RBP2.41□□□□□ -2.02
TOPBP1-206ENST00000508524 COILP38432 576 aaPredicted RBP2.41□□□□□ -2.02
TOPBP1-206ENST00000508524 AIF1P55008 147 aa2.41□□□□□ -2.02
TOPBP1-206ENST00000508524 KRTAP12-3P60328 96 aa2.41□□□□□ -2.02
TOPBP1-206ENST00000508524 FAM53BQ14153 422 aa2.41□□□□□ -2.02
TOPBP1-206ENST00000508524 GUSBP1Q15486 140 aa2.41□□□□□ -2.02
TOPBP1-206ENST00000508524 TSC22D1Q15714 1073 aa2.41□□□□□ -2.02
TOPBP1-206ENST00000508524 DPYSL2Q16555 572 aa2.41□□□□□ -2.02
TOPBP1-206ENST00000508524 ZNF791Q3KP31 576 aaPredicted RBP2.41□□□□□ -2.02
TOPBP1-206ENST00000508524 NCR3LG1Q68D85 454 aa2.41□□□□□ -2.02
TOPBP1-206ENST00000508524 RTL4Q6ZR62 310 aa2.41□□□□□ -2.02
TOPBP1-206ENST00000508524 CALHM3Q86XJ0 350 aa2.41□□□□□ -2.02
TOPBP1-206ENST00000508524 ZDHHC21Q8IVQ6 265 aa2.41□□□□□ -2.02
TOPBP1-206ENST00000508524 B3GNT7Q8NFL0 401 aa2.41□□□□□ -2.02
TOPBP1-206ENST00000508524 OR4D5Q8NGN0 318 aa2.41□□□□□ -2.02
TOPBP1-206ENST00000508524 OR13C4Q8NGS5 318 aa2.41□□□□□ -2.02
TOPBP1-206ENST00000508524 EFHD2Q96C19 240 aaPredicted RBP2.41□□□□□ -2.02
TOPBP1-206ENST00000508524 BPESC1Q9GZL8 116 aa2.41□□□□□ -2.02
TOPBP1-206ENST00000508524 GIN1Q9NXP7 522 aa2.41□□□□□ -2.02
TOPBP1-206ENST00000508524 YARS2Q9Y2Z4 477 aaKnown RBP2.41□□□□□ -2.02
TOPBP1-206ENST00000508524 OR10H1Q9Y4A9 318 aa2.41□□□□□ -2.02
TOPBP1-206ENST00000508524 EXPH5Q8NEV8 1989 aa2.4□□□□□ -2.02
TOPBP1-206ENST00000508524 LOC285095A0A1B0GVY8 99 aa2.4□□□□□ -2.03
TOPBP1-206ENST00000508524 TCRBV9S1A1TA0A576 114 aa2.4□□□□□ -2.03
TOPBP1-206ENST00000508524 GOLGA6L4A6NEF3 574 aa2.4□□□□□ -2.03
TOPBP1-206ENST00000508524 C17orf51A8MQB3 221 aa2.4□□□□□ -2.03
TOPBP1-206ENST00000508524 E7EQL1 145 aa2.4□□□□□ -2.03
TOPBP1-206ENST00000508524 F8VZ95 297 aa2.4□□□□□ -2.03
TOPBP1-206ENST00000508524 H0YHG0 523 aa2.4□□□□□ -2.03
TOPBP1-206ENST00000508524 OR1I1O60431 355 aa2.4□□□□□ -2.03
TOPBP1-206ENST00000508524 SMIM10L1P0DMW3 83 aa2.4□□□□□ -2.03
TOPBP1-206ENST00000508524 CCR7P32248 378 aa2.4□□□□□ -2.03
TOPBP1-206ENST00000508524 CDK9P50750 372 aaKnown RBP2.4□□□□□ -2.03
TOPBP1-206ENST00000508524 ZNF140P52738 457 aaPredicted RBP2.4□□□□□ -2.03
TOPBP1-206ENST00000508524 KCNJ2P63252 427 aa2.4□□□□□ -2.03
TOPBP1-206ENST00000508524 IL1RL1Q01638 556 aa2.4□□□□□ -2.03
TOPBP1-206ENST00000508524 BSPH1Q075Z2 132 aa2.4□□□□□ -2.03
TOPBP1-206ENST00000508524 SYCNQ0VAF6 134 aa2.4□□□□□ -2.03
TOPBP1-206ENST00000508524 TATDN3Q17R31 274 aa2.4□□□□□ -2.03
TOPBP1-206ENST00000508524 EXOC3L4Q17RC7 722 aa2.4□□□□□ -2.03
TOPBP1-206ENST00000508524 EXOC3L2Q2M3D2 409 aa2.4□□□□□ -2.03
TOPBP1-206ENST00000508524 NCMAPQ5T1S8 102 aa2.4□□□□□ -2.03
TOPBP1-206ENST00000508524 DNAJC24Q6P3W2 148 aa2.4□□□□□ -2.03
TOPBP1-206ENST00000508524 ENPP6Q6UWR7 440 aa2.4□□□□□ -2.03
TOPBP1-206ENST00000508524 H2AFVQ71UI9 128 aa2.4□□□□□ -2.03
TOPBP1-206ENST00000508524 ZNF573Q86YE8 665 aa2.4□□□□□ -2.03
TOPBP1-206ENST00000508524 PHF13Q86YI8 300 aaPredicted RBP2.4□□□□□ -2.03
TOPBP1-206ENST00000508524 BBS5Q8N3I7 341 aa2.4□□□□□ -2.03
TOPBP1-206ENST00000508524 PQLC3Q8N755 202 aa2.4□□□□□ -2.03
TOPBP1-206ENST00000508524 CNEP1R1Q8N9A8 125 aa2.4□□□□□ -2.03
TOPBP1-206ENST00000508524 OR4K2Q8NGD2 314 aa2.4□□□□□ -2.03
TOPBP1-206ENST00000508524 ZNF418Q8TF45 676 aaPredicted RBP2.4□□□□□ -2.03
TOPBP1-206ENST00000508524 RGP1Q92546 391 aaPredicted RBP2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms