RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 KPTNQ9Y664 436 aa1.79□□□□□ -2.12
TOPBP1-204ENST00000505804 SSH2Q76I76 1423 aa1.79□□□□□ -2.12
TOPBP1-204ENST00000505804 ZNF407Q9C0G0 2248 aa1.78□□□□□ -2.12
TOPBP1-204ENST00000505804 ADAMTSL3P82987 1691 aa1.78□□□□□ -2.12
TOPBP1-204ENST00000505804 DHX57Q6P158 1386 aaKnown RBP1.78□□□□□ -2.12
TOPBP1-204ENST00000505804 ZBED9Q6R2W3 1325 aa1.78□□□□□ -2.12
TOPBP1-204ENST00000505804 C15orf65H3BRN8 121 aa1.78□□□□□ -2.12
TOPBP1-204ENST00000505804 DHRS3O75911 302 aa1.78□□□□□ -2.12
TOPBP1-204ENST00000505804 CXorf1O96002 111 aa1.78□□□□□ -2.12
TOPBP1-204ENST00000505804 CD9P21926 228 aa1.78□□□□□ -2.12
TOPBP1-204ENST00000505804 MLF1P58340 268 aa1.78□□□□□ -2.12
TOPBP1-204ENST00000505804 RPL10AP62906 217 aaKnown RBP1.78□□□□□ -2.12
TOPBP1-204ENST00000505804 IFFO1Q0D2I5 559 aa1.78□□□□□ -2.12
TOPBP1-204ENST00000505804 PMVKQ15126 192 aa1.78□□□□□ -2.12
TOPBP1-204ENST00000505804 ATP6V1FQ16864 119 aa1.78□□□□□ -2.12
TOPBP1-204ENST00000505804 PDZD11Q5EBL8 140 aa1.78□□□□□ -2.12
TOPBP1-204ENST00000505804 FAM27D1Q5T7N8 215 aa1.78□□□□□ -2.12
TOPBP1-204ENST00000505804 KCTD16Q68DU8 428 aa1.78□□□□□ -2.12
TOPBP1-204ENST00000505804 AMMECR1LQ6DCA0 310 aa1.78□□□□□ -2.12
TOPBP1-204ENST00000505804 KRTAP5-7Q6L8G8 165 aa1.78□□□□□ -2.12
TOPBP1-204ENST00000505804 CYP4Z2PQ8N1L4 340 aa1.78□□□□□ -2.12
TOPBP1-204ENST00000505804 OR4K2Q8NGD2 314 aa1.78□□□□□ -2.12
TOPBP1-204ENST00000505804 OR51A7Q8NH64 312 aa1.78□□□□□ -2.12
TOPBP1-204ENST00000505804 NDNFQ8TB73 568 aa1.78□□□□□ -2.12
TOPBP1-204ENST00000505804 ZFAND1Q8TCF1 268 aa1.78□□□□□ -2.12
TOPBP1-204ENST00000505804 YIPF5Q969M3 257 aa1.78□□□□□ -2.12
TOPBP1-204ENST00000505804 OTUB2Q96DC9 234 aa1.78□□□□□ -2.12
TOPBP1-204ENST00000505804 SMIM8Q96KF7 97 aa1.78□□□□□ -2.12
TOPBP1-204ENST00000505804 SPACA5Q96QH8 159 aa1.78□□□□□ -2.12
TOPBP1-204ENST00000505804 TSNAXQ99598 290 aaKnown RBP1.78□□□□□ -2.12
TOPBP1-204ENST00000505804 C20orf144Q9BQM9 153 aa1.78□□□□□ -2.12
TOPBP1-204ENST00000505804 TMED9Q9BVK6 235 aa1.78□□□□□ -2.12
TOPBP1-204ENST00000505804 PORCNQ9H237 461 aa1.78□□□□□ -2.12
TOPBP1-204ENST00000505804 NCOR1P1Q9H4R4 102 aa1.78□□□□□ -2.12
TOPBP1-204ENST00000505804 RDH14Q9HBH5 336 aa1.78□□□□□ -2.12
TOPBP1-204ENST00000505804 C6orf50Q9HD87 102 aa1.78□□□□□ -2.12
TOPBP1-204ENST00000505804 PRO0628Q9UI54 55 aa1.78□□□□□ -2.12
TOPBP1-204ENST00000505804 CFL2Q9Y281 166 aa1.78□□□□□ -2.12
TOPBP1-204ENST00000505804 KLF13Q9Y2Y9 288 aaPredicted RBP1.78□□□□□ -2.12
TOPBP1-204ENST00000505804 IGKV1OR2-108A0A075B7D4 117 aa1.77□□□□□ -2.13
TOPBP1-204ENST00000505804 FAM240AA0A1B0GVK7 77 aa1.77□□□□□ -2.13
TOPBP1-204ENST00000505804 H7C2Y5 167 aa1.77□□□□□ -2.13
TOPBP1-204ENST00000505804 PLEKHA8P1O95397 391 aa1.77□□□□□ -2.13
TOPBP1-204ENST00000505804 CDK1P06493 297 aa1.77□□□□□ -2.13
TOPBP1-204ENST00000505804 RHOCP08134 193 aa1.77□□□□□ -2.13
TOPBP1-204ENST00000505804 TEAD1P28347 426 aa1.77□□□□□ -2.13
TOPBP1-204ENST00000505804 NUDT2P50583 147 aa1.77□□□□□ -2.13
TOPBP1-204ENST00000505804 PSMC5P62195 406 aa1.77□□□□□ -2.13
TOPBP1-204ENST00000505804 RPL31P62899 125 aaKnown RBP1.77□□□□□ -2.13
TOPBP1-204ENST00000505804 ELOCQ15369 112 aa1.77□□□□□ -2.13
TOPBP1-204ENST00000505804 LINC00303Q3SY05 128 aa1.77□□□□□ -2.13
TOPBP1-204ENST00000505804 MRPL2Q5T653 305 aaKnown RBP1.77□□□□□ -2.13
TOPBP1-204ENST00000505804 SMARCD3Q6STE5 483 aa1.77□□□□□ -2.13
TOPBP1-204ENST00000505804 FAM231DQ6ZW35 169 aa1.77□□□□□ -2.13
TOPBP1-204ENST00000505804 TMEM144Q7Z5S9 345 aa1.77□□□□□ -2.13
TOPBP1-204ENST00000505804 LINC00337Q8N6G1 96 aa1.77□□□□□ -2.13
TOPBP1-204ENST00000505804 CMTM2Q8TAZ6 248 aa1.77□□□□□ -2.13
TOPBP1-204ENST00000505804 ACTL9Q8TC94 416 aa1.77□□□□□ -2.13
TOPBP1-204ENST00000505804 PPP1R36Q96LQ0 422 aa1.77□□□□□ -2.13
TOPBP1-204ENST00000505804 PKMYT1Q99640 499 aa1.77□□□□□ -2.13
TOPBP1-204ENST00000505804 THTPAQ9BU02 230 aa1.77□□□□□ -2.13
TOPBP1-204ENST00000505804 FBXO44Q9H4M3 255 aa1.77□□□□□ -2.13
TOPBP1-204ENST00000505804 TFR2Q9UP52 801 aa1.77□□□□□ -2.13
TOPBP1-204ENST00000505804 IGLL5B9A064 214 aa1.76□□□□□ -2.13
TOPBP1-204ENST00000505804 H3BQ85 93 aa1.76□□□□□ -2.13
TOPBP1-204ENST00000505804 ENTPD6O75354 484 aa1.76□□□□□ -2.13
TOPBP1-204ENST00000505804 ETHE1O95571 254 aa1.76□□□□□ -2.13
TOPBP1-204ENST00000505804 IGHMP01871 453 aa1.76□□□□□ -2.13
TOPBP1-204ENST00000505804 OR5AL1P0C617 328 aa1.76□□□□□ -2.13
TOPBP1-204ENST00000505804 PRPS1L1P21108 318 aa1.76□□□□□ -2.13
TOPBP1-204ENST00000505804 SLC6A1P30531 599 aa1.76□□□□□ -2.13
TOPBP1-204ENST00000505804 IL5RAQ01344 420 aa1.76□□□□□ -2.13
TOPBP1-204ENST00000505804 TNFRSF9Q07011 255 aa1.76□□□□□ -2.13
TOPBP1-204ENST00000505804 ZNF141Q15928 474 aa1.76□□□□□ -2.13
TOPBP1-204ENST00000505804 CDNFQ49AH0 187 aa1.76□□□□□ -2.13
TOPBP1-204ENST00000505804 DUPD1Q68J44 220 aa1.76□□□□□ -2.13
TOPBP1-204ENST00000505804 PAGE2Q7Z2X7 111 aa1.76□□□□□ -2.13
TOPBP1-204ENST00000505804 LINC00523Q86TU6 105 aa1.76□□□□□ -2.13
TOPBP1-204ENST00000505804 OR51L1Q8NGJ5 315 aa1.76□□□□□ -2.13
TOPBP1-204ENST00000505804 OR5H2Q8NGV7 314 aa1.76□□□□□ -2.13
TOPBP1-204ENST00000505804 TNFRSF14Q92956 283 aa1.76□□□□□ -2.13
TOPBP1-204ENST00000505804 CENPNQ96H22 339 aaPredicted RBP1.76□□□□□ -2.13
TOPBP1-204ENST00000505804 IGF2BP2-AS1Q96M15 143 aa1.76□□□□□ -2.13
TOPBP1-204ENST00000505804 METTL26Q96S19 204 aa1.76□□□□□ -2.13
TOPBP1-204ENST00000505804 CHID1Q9BWS9 393 aa1.76□□□□□ -2.13
TOPBP1-204ENST00000505804 LZTFL1Q9NQ48 299 aa1.76□□□□□ -2.13
TOPBP1-204ENST00000505804 PARP11Q9NR21 331 aa1.76□□□□□ -2.13
TOPBP1-204ENST00000505804 RBM22Q9NW64 420 aaKnown RBP eCLIP1.76□□□□□ -2.13
TOPBP1-204ENST00000505804 IFNKQ9P0W0 207 aa1.76□□□□□ -2.13
TOPBP1-204ENST00000505804 SLC7A11Q9UPY5 501 aa1.76□□□□□ -2.13
TOPBP1-204ENST00000505804 PLXNB1O43157 2135 aa1.75□□□□□ -2.13
TOPBP1-204ENST00000505804 C9JQL5 133 aa1.75□□□□□ -2.13
TOPBP1-204ENST00000505804 UPK1AO00322 258 aa1.75□□□□□ -2.13
TOPBP1-204ENST00000505804 OR2A4O95047 310 aa1.75□□□□□ -2.13
TOPBP1-204ENST00000505804 CPSF4O95639 269 aaKnown RBP1.75□□□□□ -2.13
TOPBP1-204ENST00000505804 MBP02144 154 aa1.75□□□□□ -2.13
TOPBP1-204ENST00000505804 TGFBR2P37173 567 aa1.75□□□□□ -2.13
TOPBP1-204ENST00000505804 TAS2R60P59551 318 aa1.75□□□□□ -2.13
TOPBP1-204ENST00000505804 ZNF470Q6ECI4 717 aa1.75□□□□□ -2.13
TOPBP1-204ENST00000505804 CLEC19AQ6UXS0 136 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms