RNA–Protein interactions for RNA: ENST00000491075.1

CLIP2-208, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-208ENST00000491075 LAMP5Q9UJQ1 280 aa16.55■□□□□ 0.24
CLIP2-208ENST00000491075 HILPDAQ9Y5L2 63 aa16.55■□□□□ 0.24
CLIP2-208ENST00000491075 FAM90A22PA8MWA6 464 aa16.54■□□□□ 0.24
CLIP2-208ENST00000491075 IGLV3-1P01715 115 aa16.54■□□□□ 0.24
CLIP2-208ENST00000491075 ALOX5APP20292 161 aa16.54■□□□□ 0.24
CLIP2-208ENST00000491075 KCTD18Q6PI47 426 aaPredicted RBP16.54■□□□□ 0.24
CLIP2-208ENST00000491075 DEGS2Q6QHC5 323 aa16.54■□□□□ 0.24
CLIP2-208ENST00000491075 ASCC1Q8N9N2 400 aaKnown RBP16.54■□□□□ 0.24
CLIP2-208ENST00000491075 OR4X2Q8NGF9 303 aa16.54■□□□□ 0.24
CLIP2-208ENST00000491075 OR51E1Q8TCB6 317 aa16.54■□□□□ 0.24
CLIP2-208ENST00000491075 DPF1Q92782 380 aa16.54■□□□□ 0.24
CLIP2-208ENST00000491075 MYDGFQ969H8 173 aa16.54■□□□□ 0.24
CLIP2-208ENST00000491075 AKR1E2Q96JD6 320 aa16.54■□□□□ 0.24
CLIP2-208ENST00000491075 NIPSNAP1Q9BPW8 284 aa16.54■□□□□ 0.24
CLIP2-208ENST00000491075 PBOV1Q9GZY1 135 aa16.54■□□□□ 0.24
CLIP2-208ENST00000491075 MAGIXQ9H6Y5 334 aa16.54■□□□□ 0.24
CLIP2-208ENST00000491075 TAS2R1Q9NYW7 299 aa16.54■□□□□ 0.24
CLIP2-208ENST00000491075 DHRS3O75911 302 aa16.53■□□□□ 0.24
CLIP2-208ENST00000491075 JUNBP17275 347 aaPredicted RBP16.53■□□□□ 0.24
CLIP2-208ENST00000491075 EDDM3BP56851 147 aa16.53■□□□□ 0.24
CLIP2-208ENST00000491075 ACTA2P62736 377 aa16.53■□□□□ 0.24
CLIP2-208ENST00000491075 ACTG2P63267 376 aa16.53■□□□□ 0.24
CLIP2-208ENST00000491075 ACTC1P68032 377 aa16.53■□□□□ 0.24
CLIP2-208ENST00000491075 ACTA1P68133 377 aa16.53■□□□□ 0.24
CLIP2-208ENST00000491075 DCTN2Q13561 401 aaKnown RBP16.53■□□□□ 0.24
CLIP2-208ENST00000491075 SLC35D3Q5M8T2 416 aa16.53■□□□□ 0.24
CLIP2-208ENST00000491075 OR2T5Q6IEZ7 315 aa16.53■□□□□ 0.24
CLIP2-208ENST00000491075 CYP2R1Q6VVX0 501 aa16.53■□□□□ 0.24
CLIP2-208ENST00000491075 GDPD3Q7L5L3 318 aa16.53■□□□□ 0.24
CLIP2-208ENST00000491075 OR10G2Q8NGC3 310 aa16.53■□□□□ 0.24
CLIP2-208ENST00000491075 OR2T29Q8NH02 315 aa16.53■□□□□ 0.24
CLIP2-208ENST00000491075 NDNFQ8TB73 568 aa16.53■□□□□ 0.24
CLIP2-208ENST00000491075 ZNF714Q96N38 554 aa16.53■□□□□ 0.24
CLIP2-208ENST00000491075 INPP5EQ9NRR6 644 aa16.53■□□□□ 0.24
CLIP2-208ENST00000491075 ACTR3BQ9P1U1 418 aa16.53■□□□□ 0.24
CLIP2-208ENST00000491075 SLC22A13Q9Y226 551 aa16.53■□□□□ 0.24
CLIP2-208ENST00000491075 DNAJC8O75937 253 aaPredicted RBP16.52■□□□□ 0.24
CLIP2-208ENST00000491075 ATP6V1B2P21281 511 aa16.52■□□□□ 0.24
CLIP2-208ENST00000491075 MPZP25189 248 aa16.52■□□□□ 0.24
CLIP2-208ENST00000491075 COL10A1Q03692 680 aa16.52■□□□□ 0.24
CLIP2-208ENST00000491075 IL18R1Q13478 541 aa16.52■□□□□ 0.24
CLIP2-208ENST00000491075 CLVS2Q5SYC1 327 aa16.52■□□□□ 0.24
CLIP2-208ENST00000491075 CAPSLQ8WWF8 208 aa16.52■□□□□ 0.24
CLIP2-208ENST00000491075 TEAD3Q99594 435 aa16.52■□□□□ 0.24
CLIP2-208ENST00000491075 MROQ9BYG7 248 aa16.52■□□□□ 0.24
CLIP2-208ENST00000491075 LIN7BQ9HAP6 207 aa16.52■□□□□ 0.24
CLIP2-208ENST00000491075 NUFIP1Q9UHK0 495 aaKnown RBP16.52■□□□□ 0.24
CLIP2-208ENST00000491075 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.52■□□□□ 0.24
CLIP2-208ENST00000491075 IGHV2-26A0A0B4J1V2 119 aa16.51■□□□□ 0.23
CLIP2-208ENST00000491075 PQLC2LA1A4F0 135 aa16.51■□□□□ 0.23
CLIP2-208ENST00000491075 MEX3AA1L020 520 aaKnown RBP16.51■□□□□ 0.23
CLIP2-208ENST00000491075 DLGAP1O14490 977 aa16.51■□□□□ 0.23
CLIP2-208ENST00000491075 ZNF737O75373 536 aa16.51■□□□□ 0.23
CLIP2-208ENST00000491075 HOXD3P31249 432 aaPredicted RBP16.51■□□□□ 0.23
CLIP2-208ENST00000491075 ERVK11-1P61568 191 aa16.51■□□□□ 0.23
CLIP2-208ENST00000491075 RPS7P62081 194 aaKnown RBP16.51■□□□□ 0.23
CLIP2-208ENST00000491075 MEF2CQ06413 473 aaPredicted RBP16.51■□□□□ 0.23
CLIP2-208ENST00000491075 ZNF829Q3KNS6 432 aaPredicted RBP16.51■□□□□ 0.23
CLIP2-208ENST00000491075 KHDC1LQ5JSQ8 128 aa16.51■□□□□ 0.23
CLIP2-208ENST00000491075 TMEM42Q69YG0 159 aa16.51■□□□□ 0.23
CLIP2-208ENST00000491075 OR8H2Q8N162 312 aa16.51■□□□□ 0.23
CLIP2-208ENST00000491075 BATF2Q8N1L9 274 aa16.51■□□□□ 0.23
CLIP2-208ENST00000491075 ELAC2Q9BQ52 826 aaKnown RBP16.51■□□□□ 0.23
CLIP2-208ENST00000491075 YIPF3Q9GZM5 350 aa16.51■□□□□ 0.23
CLIP2-208ENST00000491075 NDE1Q9NXR1 346 aa16.51■□□□□ 0.23
CLIP2-208ENST00000491075 SESN1Q9Y6P5 492 aa16.51■□□□□ 0.23
CLIP2-208ENST00000491075 PSMD9O00233 223 aa16.5■□□□□ 0.23
CLIP2-208ENST00000491075 ZNF254O75437 659 aa16.5■□□□□ 0.23
CLIP2-208ENST00000491075 CHRM2P08172 466 aa16.5■□□□□ 0.23
CLIP2-208ENST00000491075 GK3PQ14409 553 aa16.5■□□□□ 0.23
CLIP2-208ENST00000491075 C16orf89Q6UX73 402 aa16.5■□□□□ 0.23
CLIP2-208ENST00000491075 ZBTB49Q6ZSB9 765 aa16.5■□□□□ 0.23
CLIP2-208ENST00000491075 ASRGL1Q7L266 308 aa16.5■□□□□ 0.23
CLIP2-208ENST00000491075 TCF23Q7RTU1 214 aa16.5■□□□□ 0.23
CLIP2-208ENST00000491075 PIGWQ7Z7B1 504 aa16.5■□□□□ 0.23
CLIP2-208ENST00000491075 CPOQ8IVL8 374 aa16.5■□□□□ 0.23
CLIP2-208ENST00000491075 ZNF676Q8N7Q3 588 aa16.5■□□□□ 0.23
CLIP2-208ENST00000491075 LINC00482Q8N8I6 264 aa16.5■□□□□ 0.23
CLIP2-208ENST00000491075 FEVQ99581 238 aa16.5■□□□□ 0.23
CLIP2-208ENST00000491075 CLEC7AQ9BXN2 247 aa16.5■□□□□ 0.23
CLIP2-208ENST00000491075 GPR173Q9NS66 373 aa16.5■□□□□ 0.23
CLIP2-208ENST00000491075 DNAJB9Q9UBS3 223 aa16.5■□□□□ 0.23
CLIP2-208ENST00000491075 TCRBV5S2A0A599 114 aa16.49■□□□□ 0.23
CLIP2-208ENST00000491075 hADV38S2A0JD32 116 aa16.49■□□□□ 0.23
CLIP2-208ENST00000491075 ARRDC5A6NEK1 342 aa16.49■□□□□ 0.23
CLIP2-208ENST00000491075 HMGN1P05114 100 aa16.49■□□□□ 0.23
CLIP2-208ENST00000491075 LPLP06858 475 aa16.49■□□□□ 0.23
CLIP2-208ENST00000491075 SLC2A5P22732 501 aa16.49■□□□□ 0.23
CLIP2-208ENST00000491075 HCCSP53701 268 aa16.49■□□□□ 0.23
CLIP2-208ENST00000491075 ROM1Q03395 351 aa16.49■□□□□ 0.23
CLIP2-208ENST00000491075 IL24Q13007 206 aa16.49■□□□□ 0.23
CLIP2-208ENST00000491075 GINS1Q14691 196 aa16.49■□□□□ 0.23
CLIP2-208ENST00000491075 ZNF679Q8IYX0 411 aa16.49■□□□□ 0.23
CLIP2-208ENST00000491075 DEFB107AQ8IZN7 70 aa16.49■□□□□ 0.23
CLIP2-208ENST00000491075 PKIBQ9C010 78 aa16.49■□□□□ 0.23
CLIP2-208ENST00000491075 LINC00312Q9Y6C7 94 aa16.49■□□□□ 0.23
CLIP2-208ENST00000491075 TTRP02766 147 aa16.48■□□□□ 0.23
CLIP2-208ENST00000491075 HTR1DP28221 377 aa16.48■□□□□ 0.23
CLIP2-208ENST00000491075 RIDAP52758 137 aaKnown RBP16.48■□□□□ 0.23
CLIP2-208ENST00000491075 ESRRGP62508 458 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms