RNA–Protein interactions for RNA: ENST00000487017.5

COL7A1-210, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 5,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-210ENST00000487017 OR10AD1Q8NGE0 317 aa14.62□□□□□ -0.07
COL7A1-210ENST00000487017 GPR137Q96N19 417 aa14.62□□□□□ -0.07
COL7A1-210ENST00000487017 RPP25Q9BUL9 199 aaKnown RBP14.62□□□□□ -0.07
COL7A1-210ENST00000487017 COX7A2P2O60397 106 aa14.61□□□□□ -0.07
COL7A1-210ENST00000487017 PDCD6O75340 191 aa14.61□□□□□ -0.07
COL7A1-210ENST00000487017 TNFSF15O95150 251 aa14.61□□□□□ -0.07
COL7A1-210ENST00000487017 PNPP00491 289 aa14.61□□□□□ -0.07
COL7A1-210ENST00000487017 OR5AC1P0C628 307 aa14.61□□□□□ -0.07
COL7A1-210ENST00000487017 SNRPEP62304 92 aaKnown RBP14.61□□□□□ -0.07
COL7A1-210ENST00000487017 PSG6Q00889 435 aa14.61□□□□□ -0.07
COL7A1-210ENST00000487017 INPP5JQ15735 1006 aaPredicted RBP14.61□□□□□ -0.07
COL7A1-210ENST00000487017 ZNF770Q6IQ21 691 aaPredicted RBP14.61□□□□□ -0.07
COL7A1-210ENST00000487017 FAM60AQ9NP50 221 aa14.61□□□□□ -0.07
COL7A1-210ENST00000487017 ERRFI1Q9UJM3 462 aaPredicted RBP14.61□□□□□ -0.07
COL7A1-210ENST00000487017 HPP00738 406 aa14.61□□□□□ -0.07
COL7A1-210ENST00000487017 ZNF32P17041 273 aa14.61□□□□□ -0.07
COL7A1-210ENST00000487017 TPPP2P59282 170 aa14.61□□□□□ -0.07
COL7A1-210ENST00000487017 FZD5Q13467 585 aa14.61□□□□□ -0.07
COL7A1-210ENST00000487017 VASH2Q86V25 355 aa14.61□□□□□ -0.07
COL7A1-210ENST00000487017 ADAMTSL1Q8N6G6 1762 aa14.61□□□□□ -0.07
COL7A1-210ENST00000487017 PTTG1IPP53801 180 aa14.61□□□□□ -0.07
COL7A1-210ENST00000487017 ETFDHQ16134 617 aa14.61□□□□□ -0.07
COL7A1-210ENST00000487017 VSTM2LQ96N03 204 aa14.61□□□□□ -0.07
COL7A1-210ENST00000487017 PECRQ9BY49 303 aa14.61□□□□□ -0.07
COL7A1-210ENST00000487017 TRGV8A0A0C4DH27 118 aa14.61□□□□□ -0.07
COL7A1-210ENST00000487017 FAM24AA6NFZ4 105 aa14.61□□□□□ -0.07
COL7A1-210ENST00000487017 SOX15O60248 233 aa14.61□□□□□ -0.07
COL7A1-210ENST00000487017 GABRA1P14867 456 aa14.61□□□□□ -0.07
COL7A1-210ENST00000487017 G0S2P27469 103 aa14.61□□□□□ -0.07
COL7A1-210ENST00000487017 PRDX4Q13162 271 aa14.61□□□□□ -0.07
COL7A1-210ENST00000487017 KLF9Q13886 244 aaPredicted RBP14.61□□□□□ -0.07
COL7A1-210ENST00000487017 B3GNTL1Q67FW5 361 aaPredicted RBP14.61□□□□□ -0.07
COL7A1-210ENST00000487017 CARFQ8N187 725 aa14.61□□□□□ -0.07
COL7A1-210ENST00000487017 OCIAD1Q9NX40 245 aa14.61□□□□□ -0.07
COL7A1-210ENST00000487017 OR2C3Q8N628 320 aa14.61□□□□□ -0.07
COL7A1-210ENST00000487017 GABRG3Q99928 467 aa14.61□□□□□ -0.07
COL7A1-210ENST00000487017 CEACAM6P40199 344 aa14.6□□□□□ -0.07
COL7A1-210ENST00000487017 OR1C1Q15619 314 aa14.6□□□□□ -0.07
COL7A1-210ENST00000487017 BVESQ8NE79 360 aa14.6□□□□□ -0.07
COL7A1-210ENST00000487017 TAAR9Q96RI9 348 aa14.6□□□□□ -0.07
COL7A1-210ENST00000487017 SARGQ9BW04 601 aa14.6□□□□□ -0.07
COL7A1-210ENST00000487017 TAAR3PQ9P1P4 343 aa14.6□□□□□ -0.07
COL7A1-210ENST00000487017 CLDN34H7C241 214 aa14.6□□□□□ -0.07
COL7A1-210ENST00000487017 CELA2BP08218 269 aaPredicted RBP14.6□□□□□ -0.07
COL7A1-210ENST00000487017 FABP4P15090 132 aa14.6□□□□□ -0.07
COL7A1-210ENST00000487017 CNN1P51911 297 aaKnown RBP14.6□□□□□ -0.07
COL7A1-210ENST00000487017 SLC38A11Q08AI6 406 aa14.6□□□□□ -0.07
COL7A1-210ENST00000487017 MRPS18AQ9NVS2 196 aaKnown RBP14.6□□□□□ -0.07
COL7A1-210ENST00000487017 POMT1Q9Y6A1 747 aa14.6□□□□□ -0.07
COL7A1-210ENST00000487017 A0A1W2PQD3 144 aa14.6□□□□□ -0.07
COL7A1-210ENST00000487017 TOX4O94842 621 aa14.6□□□□□ -0.07
COL7A1-210ENST00000487017 MNX1P50219 401 aaPredicted RBP14.6□□□□□ -0.07
COL7A1-210ENST00000487017 CD226Q15762 336 aa14.6□□□□□ -0.07
COL7A1-210ENST00000487017 Q1RN00 199 aa14.6□□□□□ -0.07
COL7A1-210ENST00000487017 FFAR4Q5NUL3 377 aa14.6□□□□□ -0.07
COL7A1-210ENST00000487017 OR8B12Q8NGG6 310 aa14.6□□□□□ -0.07
COL7A1-210ENST00000487017 RPS4Y2Q8TD47 263 aa14.6□□□□□ -0.07
COL7A1-210ENST00000487017 PLPPR2Q96GM1 343 aa14.6□□□□□ -0.07
COL7A1-210ENST00000487017 POM121L2Q96KW2 1035 aa14.6□□□□□ -0.07
COL7A1-210ENST00000487017 TIMM9Q9Y5J7 89 aa14.6□□□□□ -0.07
COL7A1-210ENST00000487017 TRGV10A0A0A0MS01 117 aa14.6□□□□□ -0.07
COL7A1-210ENST00000487017 ERVFC1-1P60608 527 aa14.6□□□□□ -0.07
COL7A1-210ENST00000487017 RANP62826 216 aaKnown RBP14.6□□□□□ -0.07
COL7A1-210ENST00000487017 IL11RAQ14626 422 aa14.6□□□□□ -0.07
COL7A1-210ENST00000487017 TMEM92Q6UXU6 159 aa14.6□□□□□ -0.07
COL7A1-210ENST00000487017 TMEM91Q6ZNR0 172 aa14.6□□□□□ -0.07
COL7A1-210ENST00000487017 UBALD2Q8IYN6 164 aa14.6□□□□□ -0.07
COL7A1-210ENST00000487017 ICAM5Q9UMF0 924 aa14.6□□□□□ -0.07
COL7A1-210ENST00000487017 TRAPPC1Q9Y5R8 145 aa14.6□□□□□ -0.07
COL7A1-210ENST00000487017 A0A1W2PPV9 198 aa14.6□□□□□ -0.07
COL7A1-210ENST00000487017 NGFP01138 241 aa14.6□□□□□ -0.07
COL7A1-210ENST00000487017 CTSDP07339 412 aaPredicted RBP14.6□□□□□ -0.07
COL7A1-210ENST00000487017 MDH2P40926 338 aaKnown RBP14.6□□□□□ -0.07
COL7A1-210ENST00000487017 GUSBP11Q6P575 273 aa14.6□□□□□ -0.07
COL7A1-210ENST00000487017 KISS1RQ969F8 398 aaPredicted RBP14.6□□□□□ -0.07
COL7A1-210ENST00000487017 TMPRSS5Q9H3S3 457 aa14.6□□□□□ -0.07
COL7A1-210ENST00000487017 SURF2Q15527 256 aaPredicted RBP14.59□□□□□ -0.07
COL7A1-210ENST00000487017 PABPC1L2AQ5JQF8 200 aa14.59□□□□□ -0.07
COL7A1-210ENST00000487017 FAM24BQ8N5W8 94 aa14.59□□□□□ -0.07
COL7A1-210ENST00000487017 OR6X1Q8NH79 312 aa14.59□□□□□ -0.07
COL7A1-210ENST00000487017 MMP24Q9Y5R2 645 aa14.59□□□□□ -0.07
COL7A1-210ENST00000487017 CNTRLQ7Z7A1 2325 aa14.59□□□□□ -0.07
COL7A1-210ENST00000487017 ADAP1O75689 374 aa14.59□□□□□ -0.07
COL7A1-210ENST00000487017 KRTDAPP60985 99 aa14.59□□□□□ -0.07
COL7A1-210ENST00000487017 TRA2AQ13595 282 aaKnown RBP eCLIP14.59□□□□□ -0.07
COL7A1-210ENST00000487017 OR10V1Q8NGI7 309 aa14.59□□□□□ -0.07
COL7A1-210ENST00000487017 XKRY2A2RUG3 117 aa14.59□□□□□ -0.07
COL7A1-210ENST00000487017 HPXP02790 462 aa14.59□□□□□ -0.07
COL7A1-210ENST00000487017 TMEM33P57088 247 aa14.59□□□□□ -0.07
COL7A1-210ENST00000487017 ISXQ2M1V0 245 aa14.59□□□□□ -0.07
COL7A1-210ENST00000487017 ZNF66Q6ZN08 573 aa14.59□□□□□ -0.07
COL7A1-210ENST00000487017 SCMH1Q96GD3 660 aa14.59□□□□□ -0.07
COL7A1-210ENST00000487017 OPN4Q9UHM6 478 aa14.59□□□□□ -0.07
COL7A1-210ENST00000487017 M0R1X1 148 aa14.59□□□□□ -0.07
COL7A1-210ENST00000487017 RNPS1Q15287 305 aaKnown RBP14.59□□□□□ -0.07
COL7A1-210ENST00000487017 NTMQ9P121 344 aa14.59□□□□□ -0.07
COL7A1-210ENST00000487017 MAP1LC3B2A6NCE7 125 aa14.58□□□□□ -0.07
COL7A1-210ENST00000487017 LPAR6P43657 344 aa14.58□□□□□ -0.07
COL7A1-210ENST00000487017 IFITM3Q01628 133 aa14.58□□□□□ -0.07
COL7A1-210ENST00000487017 LGALSLQ3ZCW2 172 aaPredicted RBP14.58□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms