RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 ACTG2P63267 376 aa16.39■□□□□ 0.21
VPS36-203ENST00000475375 ACTC1P68032 377 aa16.39■□□□□ 0.21
VPS36-203ENST00000475375 ACTA1P68133 377 aa16.39■□□□□ 0.21
VPS36-203ENST00000475375 CBX1P83916 185 aa16.39■□□□□ 0.21
VPS36-203ENST00000475375 GDPD3Q7L5L3 318 aa16.39■□□□□ 0.21
VPS36-203ENST00000475375 KRT74Q7RTS7 529 aa16.39■□□□□ 0.21
VPS36-203ENST00000475375 PGAM4Q8N0Y7 254 aa16.39■□□□□ 0.21
VPS36-203ENST00000475375 NRIP2Q9BQI9 281 aa16.39■□□□□ 0.21
VPS36-203ENST00000475375 PBOV1Q9GZY1 135 aa16.39■□□□□ 0.21
VPS36-203ENST00000475375 FAM206AQ9NX38 181 aa16.39■□□□□ 0.21
VPS36-203ENST00000475375 VNN3Q9NY84 501 aa16.39■□□□□ 0.21
VPS36-203ENST00000475375 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.39■□□□□ 0.21
VPS36-203ENST00000475375 SLC22A13Q9Y226 551 aa16.39■□□□□ 0.21
VPS36-203ENST00000475375 ACOD1A6NK06 481 aa16.38■□□□□ 0.21
VPS36-203ENST00000475375 K7N7A8 449 aa16.38■□□□□ 0.21
VPS36-203ENST00000475375 NOS1APO75052 506 aaPredicted RBP16.38■□□□□ 0.21
VPS36-203ENST00000475375 HCCSP53701 268 aa16.38■□□□□ 0.21
VPS36-203ENST00000475375 COL10A1Q03692 680 aa16.38■□□□□ 0.21
VPS36-203ENST00000475375 MINOS1Q5TGZ0 78 aa16.38■□□□□ 0.21
VPS36-203ENST00000475375 ASRGL1Q7L266 308 aa16.38■□□□□ 0.21
VPS36-203ENST00000475375 ITFG2Q969R8 447 aa16.38■□□□□ 0.21
VPS36-203ENST00000475375 AKR1E2Q96JD6 320 aa16.38■□□□□ 0.21
VPS36-203ENST00000475375 ZNF714Q96N38 554 aa16.38■□□□□ 0.21
VPS36-203ENST00000475375 TEAD3Q99594 435 aa16.38■□□□□ 0.21
VPS36-203ENST00000475375 NIPSNAP1Q9BPW8 284 aa16.38■□□□□ 0.21
VPS36-203ENST00000475375 GPR61Q9BZJ8 451 aa16.38■□□□□ 0.21
VPS36-203ENST00000475375 GPR173Q9NS66 373 aa16.38■□□□□ 0.21
VPS36-203ENST00000475375 MINOS1-NBL1R4GNA1 71 aa16.38■□□□□ 0.21
VPS36-203ENST00000475375 LPLP06858 475 aa16.37■□□□□ 0.21
VPS36-203ENST00000475375 EGFEM1PQ0D2K5 195 aa16.37■□□□□ 0.21
VPS36-203ENST00000475375 EDDM3AQ14507 147 aa16.37■□□□□ 0.21
VPS36-203ENST00000475375 PIGWQ7Z7B1 504 aa16.37■□□□□ 0.21
VPS36-203ENST00000475375 ZNF676Q8N7Q3 588 aa16.37■□□□□ 0.21
VPS36-203ENST00000475375 OR10G2Q8NGC3 310 aa16.37■□□□□ 0.21
VPS36-203ENST00000475375 ELAC2Q9BQ52 826 aaKnown RBP16.37■□□□□ 0.21
VPS36-203ENST00000475375 CHID1Q9BWS9 393 aa16.37■□□□□ 0.21
VPS36-203ENST00000475375 GTF2A1LQ9UNN4 478 aa16.37■□□□□ 0.21
VPS36-203ENST00000475375 PRODHO43272 600 aa16.36■□□□□ 0.21
VPS36-203ENST00000475375 DNAJC8O75937 253 aaPredicted RBP16.36■□□□□ 0.21
VPS36-203ENST00000475375 ALOX5APP20292 161 aa16.36■□□□□ 0.21
VPS36-203ENST00000475375 CD24P25063 80 aa16.36■□□□□ 0.21
VPS36-203ENST00000475375 MAGEA2P43356 314 aa16.36■□□□□ 0.21
VPS36-203ENST00000475375 ABCA11PQ4W5N1 156 aa16.36■□□□□ 0.21
VPS36-203ENST00000475375 CLVS2Q5SYC1 327 aa16.36■□□□□ 0.21
VPS36-203ENST00000475375 OR2T5Q6IEZ7 315 aa16.36■□□□□ 0.21
VPS36-203ENST00000475375 KCTD18Q6PI47 426 aaPredicted RBP16.36■□□□□ 0.21
VPS36-203ENST00000475375 CPOQ8IVL8 374 aa16.36■□□□□ 0.21
VPS36-203ENST00000475375 OR2T29Q8NH02 315 aa16.36■□□□□ 0.21
VPS36-203ENST00000475375 MROQ9BYG7 248 aa16.36■□□□□ 0.21
VPS36-203ENST00000475375 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.36■□□□□ 0.21
VPS36-203ENST00000475375 IGHV2-26A0A0B4J1V2 119 aa16.35■□□□□ 0.21
VPS36-203ENST00000475375 PQLC2LA1A4F0 135 aa16.35■□□□□ 0.21
VPS36-203ENST00000475375 FAM90A22PA8MWA6 464 aa16.35■□□□□ 0.21
VPS36-203ENST00000475375 DHRS3O75911 302 aa16.35■□□□□ 0.21
VPS36-203ENST00000475375 CHRM2P08172 466 aa16.35■□□□□ 0.21
VPS36-203ENST00000475375 ATP6V1B2P21281 511 aa16.35■□□□□ 0.21
VPS36-203ENST00000475375 IL18R1Q13478 541 aa16.35■□□□□ 0.21
VPS36-203ENST00000475375 DCTN2Q13561 401 aaKnown RBP16.35■□□□□ 0.21
VPS36-203ENST00000475375 ZNF829Q3KNS6 432 aaPredicted RBP16.35■□□□□ 0.21
VPS36-203ENST00000475375 LCN1P1Q5VSP4 162 aa16.35■□□□□ 0.21
VPS36-203ENST00000475375 C10orf99Q6UWK7 81 aa16.35■□□□□ 0.21
VPS36-203ENST00000475375 CD300LDQ6UXZ3 194 aa16.35■□□□□ 0.21
VPS36-203ENST00000475375 C16orf82Q7Z2V1 217 aa16.35■□□□□ 0.21
VPS36-203ENST00000475375 ANGPTL5Q86XS5 388 aa16.35■□□□□ 0.21
VPS36-203ENST00000475375 STMN2Q93045 179 aa16.35■□□□□ 0.21
VPS36-203ENST00000475375 ZNF649Q9BS31 505 aa16.35■□□□□ 0.21
VPS36-203ENST00000475375 TTTY10Q9BZA0 68 aa16.35■□□□□ 0.21
VPS36-203ENST00000475375 HES4Q9HCC6 221 aa16.35■□□□□ 0.21
VPS36-203ENST00000475375 SESN1Q9Y6P5 492 aa16.35■□□□□ 0.21
VPS36-203ENST00000475375 hADV38S2A0JD32 116 aa16.34■□□□□ 0.21
VPS36-203ENST00000475375 CCDC159P0C7I6 412 aa16.34■□□□□ 0.21
VPS36-203ENST00000475375 HTR1DP28221 377 aa16.34■□□□□ 0.21
VPS36-203ENST00000475375 GINS1Q14691 196 aa16.34■□□□□ 0.21
VPS36-203ENST00000475375 C9orf152Q5JTZ5 239 aa16.34■□□□□ 0.21
VPS36-203ENST00000475375 DEFB107AQ8IZN7 70 aa16.34■□□□□ 0.21
VPS36-203ENST00000475375 LINC00482Q8N8I6 264 aa16.34■□□□□ 0.21
VPS36-203ENST00000475375 BBS1Q8NFJ9 593 aa16.34■□□□□ 0.21
VPS36-203ENST00000475375 BCAS4Q8TDM0 211 aa16.34■□□□□ 0.21
VPS36-203ENST00000475375 FEVQ99581 238 aa16.34■□□□□ 0.21
VPS36-203ENST00000475375 CLEC7AQ9BXN2 247 aa16.34■□□□□ 0.21
VPS36-203ENST00000475375 LIN7BQ9HAP6 207 aa16.34■□□□□ 0.21
VPS36-203ENST00000475375 ACTR3BQ9P1U1 418 aa16.34■□□□□ 0.21
VPS36-203ENST00000475375 IKZF2Q9UKS7 526 aa16.34■□□□□ 0.21
VPS36-203ENST00000475375 A6NIN4 97 aa16.33■□□□□ 0.2
VPS36-203ENST00000475375 SH2D7A6NKC9 451 aaPredicted RBP16.33■□□□□ 0.2
VPS36-203ENST00000475375 INMTO95050 263 aa16.33■□□□□ 0.2
VPS36-203ENST00000475375 MRPL3P09001 348 aaKnown RBP16.33■□□□□ 0.2
VPS36-203ENST00000475375 BRS3P32247 399 aa16.33■□□□□ 0.2
VPS36-203ENST00000475375 MEF2CQ06413 473 aaPredicted RBP16.33■□□□□ 0.2
VPS36-203ENST00000475375 SLC35D3Q5M8T2 416 aa16.33■□□□□ 0.2
VPS36-203ENST00000475375 DEGS2Q6QHC5 323 aa16.33■□□□□ 0.2
VPS36-203ENST00000475375 C16orf89Q6UX73 402 aa16.33■□□□□ 0.2
VPS36-203ENST00000475375 ZBTB49Q6ZSB9 765 aa16.33■□□□□ 0.2
VPS36-203ENST00000475375 RNF144BQ7Z419 303 aa16.33■□□□□ 0.2
VPS36-203ENST00000475375 OR8H2Q8N162 312 aa16.33■□□□□ 0.2
VPS36-203ENST00000475375 OR51D1Q8NGF3 324 aa16.33■□□□□ 0.2
VPS36-203ENST00000475375 TRMT10AQ8TBZ6 339 aaKnown RBP16.33■□□□□ 0.2
VPS36-203ENST00000475375 GIPC3Q8TF64 312 aa16.33■□□□□ 0.2
VPS36-203ENST00000475375 SLC25A33Q9BSK2 321 aa16.33■□□□□ 0.2
VPS36-203ENST00000475375 YIPF3Q9GZM5 350 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms