RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 SORDQ00796 357 aa11.71□□□□□ -0.53
TRAF4-210ENST00000475329 BSPH1Q075Z2 132 aa11.71□□□□□ -0.53
TRAF4-210ENST00000475329 MZT1Q08AG7 82 aa11.71□□□□□ -0.53
TRAF4-210ENST00000475329 IL24Q13007 206 aa11.71□□□□□ -0.53
TRAF4-210ENST00000475329 PCGF3Q3KNV8 242 aa11.71□□□□□ -0.53
TRAF4-210ENST00000475329 C4orf17Q53FE4 359 aa11.71□□□□□ -0.53
TRAF4-210ENST00000475329 ELP2Q6IA86 826 aa11.71□□□□□ -0.53
TRAF4-210ENST00000475329 VHLLQ6RSH7 139 aa11.71□□□□□ -0.53
TRAF4-210ENST00000475329 FBXL14Q8N1E6 418 aa11.71□□□□□ -0.53
TRAF4-210ENST00000475329 PIAS4Q8N2W9 510 aaPredicted RBP11.71□□□□□ -0.53
TRAF4-210ENST00000475329 SPERTQ8NA61 448 aa11.71□□□□□ -0.53
TRAF4-210ENST00000475329 Q8NFD4 153 aa11.71□□□□□ -0.53
TRAF4-210ENST00000475329 OR13G1Q8NGZ3 307 aa11.71□□□□□ -0.53
TRAF4-210ENST00000475329 TMEM171Q8WVE6 324 aa11.71□□□□□ -0.53
TRAF4-210ENST00000475329 DEDD2Q8WXF8 326 aa11.71□□□□□ -0.53
TRAF4-210ENST00000475329 POM121Q96HA1 1249 aa11.71□□□□□ -0.53
TRAF4-210ENST00000475329 ARHGAP5-AS1Q96IT6 56 aa11.71□□□□□ -0.53
TRAF4-210ENST00000475329 CXXC4Q9H2H0 198 aa11.71□□□□□ -0.53
TRAF4-210ENST00000475329 ZMAT3Q9HA38 289 aaKnown RBP11.71□□□□□ -0.53
TRAF4-210ENST00000475329 KCNJ16Q9NPI9 418 aa11.71□□□□□ -0.53
TRAF4-210ENST00000475329 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.71□□□□□ -0.53
TRAF4-210ENST00000475329 NDRG3Q9UGV2 375 aa11.71□□□□□ -0.53
TRAF4-210ENST00000475329 CHD3Q12873 2000 aaKnown RBP11.7□□□□□ -0.54
TRAF4-210ENST00000475329 FAM240BA0A1B0GVZ2 78 aa11.7□□□□□ -0.54
TRAF4-210ENST00000475329 A0A1B0GWJ7 208 aa11.7□□□□□ -0.54
TRAF4-210ENST00000475329 NAP1L6A6NFF2 107 aa11.7□□□□□ -0.54
TRAF4-210ENST00000475329 DPRXA6NFQ7 191 aa11.7□□□□□ -0.54
TRAF4-210ENST00000475329 MLNRO43193 412 aa11.7□□□□□ -0.54
TRAF4-210ENST00000475329 SYNGR1O43759 233 aa11.7□□□□□ -0.54
TRAF4-210ENST00000475329 RCVRNP35243 200 aa11.7□□□□□ -0.54
TRAF4-210ENST00000475329 FAUP35544 74 aaKnown RBP11.7□□□□□ -0.54
TRAF4-210ENST00000475329 TMEM50BP56557 158 aa11.7□□□□□ -0.54
TRAF4-210ENST00000475329 SELENOVP59797 346 aa11.7□□□□□ -0.54
TRAF4-210ENST00000475329 MSMPQ1L6U9 139 aa11.7□□□□□ -0.54
TRAF4-210ENST00000475329 PLAC9Q5JTB6 97 aa11.7□□□□□ -0.54
TRAF4-210ENST00000475329 OLFML2AQ68BL7 652 aa11.7□□□□□ -0.54
TRAF4-210ENST00000475329 SLC22A25Q6T423 547 aa11.7□□□□□ -0.54
TRAF4-210ENST00000475329 TRAPPC6BQ86SZ2 158 aa11.7□□□□□ -0.54
TRAF4-210ENST00000475329 WDR86Q86TI4 376 aa11.7□□□□□ -0.54
TRAF4-210ENST00000475329 OR10AD1Q8NGE0 317 aa11.7□□□□□ -0.54
TRAF4-210ENST00000475329 PRR7Q8TB68 274 aa11.7□□□□□ -0.54
TRAF4-210ENST00000475329 NEDD4LQ96PU5 975 aa11.7□□□□□ -0.54
TRAF4-210ENST00000475329 PECRQ9BY49 303 aa11.7□□□□□ -0.54
TRAF4-210ENST00000475329 ESRP2Q9H6T0 727 aaKnown RBP11.7□□□□□ -0.54
TRAF4-210ENST00000475329 RHOFQ9HBH0 211 aa11.7□□□□□ -0.54
TRAF4-210ENST00000475329 FAIMQ9NVQ4 179 aa11.7□□□□□ -0.54
TRAF4-210ENST00000475329 ZNF107Q9UII5 783 aaPredicted RBP11.7□□□□□ -0.54
TRAF4-210ENST00000475329 DUSP13Q9UII6 198 aa11.7□□□□□ -0.54
TRAF4-210ENST00000475329 ST3GAL6Q9Y274 331 aa11.7□□□□□ -0.54
TRAF4-210ENST00000475329 POLDIP2Q9Y2S7 368 aa11.7□□□□□ -0.54
TRAF4-210ENST00000475329 IGLV3-9A0A075B6K5 115 aa11.69□□□□□ -0.54
TRAF4-210ENST00000475329 MEIS3P1A6NDR6 274 aa11.69□□□□□ -0.54
TRAF4-210ENST00000475329 FAM90A10PA6NDY2 464 aa11.69□□□□□ -0.54
TRAF4-210ENST00000475329 FAM90A18PA6NE21 464 aa11.69□□□□□ -0.54
TRAF4-210ENST00000475329 FAM90A16PA6NEW6 464 aa11.69□□□□□ -0.54
TRAF4-210ENST00000475329 FAM90A20PA6NIJ5 464 aa11.69□□□□□ -0.54
TRAF4-210ENST00000475329 FAM90A8PA6NJQ4 464 aa11.69□□□□□ -0.54
TRAF4-210ENST00000475329 FAM90A7PA6NKC0 464 aa11.69□□□□□ -0.54
TRAF4-210ENST00000475329 SERPINE3A8MV23 424 aa11.69□□□□□ -0.54
TRAF4-210ENST00000475329 FAM90A22PA8MWA6 464 aa11.69□□□□□ -0.54
TRAF4-210ENST00000475329 FAM90A12PA8MX19 464 aa11.69□□□□□ -0.54
TRAF4-210ENST00000475329 FAM90A5PA8MXJ8 464 aa11.69□□□□□ -0.54
TRAF4-210ENST00000475329 FAM90A23PA8MXZ1 464 aa11.69□□□□□ -0.54
TRAF4-210ENST00000475329 H0YL77 283 aa11.69□□□□□ -0.54
TRAF4-210ENST00000475329 MT-ND4P03905 459 aa11.69□□□□□ -0.54
TRAF4-210ENST00000475329 FAM90A15PP0C7V4 464 aa11.69□□□□□ -0.54
TRAF4-210ENST00000475329 FAM90A13PP0C7W8 464 aa11.69□□□□□ -0.54
TRAF4-210ENST00000475329 FAM90A14PP0C7W9 464 aa11.69□□□□□ -0.54
TRAF4-210ENST00000475329 FAM90A24PP0C7X0 464 aa11.69□□□□□ -0.54
TRAF4-210ENST00000475329 GNLYP22749 145 aa11.69□□□□□ -0.54
TRAF4-210ENST00000475329 KIR2DL3P43628 341 aa11.69□□□□□ -0.54
TRAF4-210ENST00000475329 NPBWR2P48146 333 aa11.69□□□□□ -0.54
TRAF4-210ENST00000475329 FGF12P61328 243 aa11.69□□□□□ -0.54
TRAF4-210ENST00000475329 TLE1Q04724 770 aa11.69□□□□□ -0.54
TRAF4-210ENST00000475329 TAF9Q16594 264 aa11.69□□□□□ -0.54
TRAF4-210ENST00000475329 PIGYQ3MUY2 71 aa11.69□□□□□ -0.54
TRAF4-210ENST00000475329 FAM76BQ5HYJ3 339 aa11.69□□□□□ -0.54
TRAF4-210ENST00000475329 NHLRC3Q5JS37 347 aa11.69□□□□□ -0.54
TRAF4-210ENST00000475329 Q6ZR03 302 aa11.69□□□□□ -0.54
TRAF4-210ENST00000475329 RTN4RL2Q86UN3 420 aa11.69□□□□□ -0.54
TRAF4-210ENST00000475329 LRP11Q86VZ4 500 aa11.69□□□□□ -0.54
TRAF4-210ENST00000475329 Q8IYB0 196 aa11.69□□□□□ -0.54
TRAF4-210ENST00000475329 SCCPDHQ8NBX0 429 aa11.69□□□□□ -0.54
TRAF4-210ENST00000475329 DUSP18Q8NEJ0 188 aa11.69□□□□□ -0.54
TRAF4-210ENST00000475329 NUDCD2Q8WVJ2 157 aa11.69□□□□□ -0.54
TRAF4-210ENST00000475329 SYT3Q9BQG1 590 aa11.69□□□□□ -0.54
TRAF4-210ENST00000475329 DPAGT1Q9H3H5 408 aa11.69□□□□□ -0.54
TRAF4-210ENST00000475329 ZNF442Q9H7R0 627 aa11.69□□□□□ -0.54
TRAF4-210ENST00000475329 MSL2Q9HCI7 577 aa11.69□□□□□ -0.54
TRAF4-210ENST00000475329 HRASLSQ9HDD0 168 aa11.69□□□□□ -0.54
TRAF4-210ENST00000475329 IFT46Q9NQC8 304 aa11.69□□□□□ -0.54
TRAF4-210ENST00000475329 MTCH1Q9NZJ7 389 aa11.69□□□□□ -0.54
TRAF4-210ENST00000475329 ELF5Q9UKW6 265 aaPredicted RBP11.69□□□□□ -0.54
TRAF4-210ENST00000475329 ATP23Q9Y6H3 246 aa11.69□□□□□ -0.54
TRAF4-210ENST00000475329 CADP27708 2225 aa11.69□□□□□ -0.54
TRAF4-210ENST00000475329 PLSCR5A0PG75 271 aa11.68□□□□□ -0.54
TRAF4-210ENST00000475329 PRSS44E7EML9 344 aa11.68□□□□□ -0.54
TRAF4-210ENST00000475329 F5H5P2 479 aa11.68□□□□□ -0.54
TRAF4-210ENST00000475329 GEMIN2O14893 280 aaKnown RBP11.68□□□□□ -0.54
TRAF4-210ENST00000475329 CA11O75493 328 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms