RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 C9orf16Q9BUW7 83 aa11.31□□□□□ -0.6
CCDC78-209ENST00000474647 OSBPL10Q9BXB5 764 aa11.31□□□□□ -0.6
CCDC78-209ENST00000474647 CDCA4Q9BXL8 241 aa11.31□□□□□ -0.6
CCDC78-209ENST00000474647 PRSS22Q9GZN4 317 aa11.31□□□□□ -0.6
CCDC78-209ENST00000474647 NIPAL2Q9H841 368 aa11.31□□□□□ -0.6
CCDC78-209ENST00000474647 NKX1-2Q9UD57 310 aaPredicted RBP11.31□□□□□ -0.6
CCDC78-209ENST00000474647 KLHDC2Q9Y2U9 406 aa11.31□□□□□ -0.6
CCDC78-209ENST00000474647 LRP12Q9Y561 859 aa11.31□□□□□ -0.6
CCDC78-209ENST00000474647 KIAA2026Q5HYC2 2103 aa11.3□□□□□ -0.6
CCDC78-209ENST00000474647 MEX3AA1L020 520 aaKnown RBP11.3□□□□□ -0.6
CCDC78-209ENST00000474647 ADARB2-AS1A8MUL3 147 aa11.3□□□□□ -0.6
CCDC78-209ENST00000474647 PRKACGP22612 351 aa11.3□□□□□ -0.6
CCDC78-209ENST00000474647 VDAC2P45880 294 aaPredicted RBP11.3□□□□□ -0.6
CCDC78-209ENST00000474647 SLC34A1Q06495 639 aa11.3□□□□□ -0.6
CCDC78-209ENST00000474647 ZNF273Q14593 569 aa11.3□□□□□ -0.6
CCDC78-209ENST00000474647 CCBE1Q6UXH8 406 aaPredicted RBP11.3□□□□□ -0.6
CCDC78-209ENST00000474647 CD300LDQ6UXZ3 194 aa11.3□□□□□ -0.6
CCDC78-209ENST00000474647 KRT77Q7Z794 578 aa11.3□□□□□ -0.6
CCDC78-209ENST00000474647 ZNF561Q8N587 486 aa11.3□□□□□ -0.6
CCDC78-209ENST00000474647 ZNF454Q8N9F8 522 aa11.3□□□□□ -0.6
CCDC78-209ENST00000474647 RPS4Y2Q8TD47 263 aa11.3□□□□□ -0.6
CCDC78-209ENST00000474647 DNAJC9Q8WXX5 260 aa11.3□□□□□ -0.6
CCDC78-209ENST00000474647 CIB1Q99828 191 aa11.3□□□□□ -0.6
CCDC78-209ENST00000474647 NIPSNAP1Q9BPW8 284 aa11.3□□□□□ -0.6
CCDC78-209ENST00000474647 OR14J1Q9UGF5 321 aa11.3□□□□□ -0.6
CCDC78-209ENST00000474647 RYR3Q15413 4870 aa11.29□□□□□ -0.6
CCDC78-209ENST00000474647 OR5B21A6NL26 309 aa11.29□□□□□ -0.6
CCDC78-209ENST00000474647 VGLL3A8MV65 326 aa11.29□□□□□ -0.6
CCDC78-209ENST00000474647 PRR23D1E9PI22 279 aaPredicted RBP11.29□□□□□ -0.6
CCDC78-209ENST00000474647 PSMD9O00233 223 aa11.29□□□□□ -0.6
CCDC78-209ENST00000474647 MTRF1O75570 445 aaKnown RBP11.29□□□□□ -0.6
CCDC78-209ENST00000474647 PRR23D2P0DMB1 279 aaPredicted RBP11.29□□□□□ -0.6
CCDC78-209ENST00000474647 PF4V1P10720 104 aa11.29□□□□□ -0.6
CCDC78-209ENST00000474647 DAPP51397 102 aa11.29□□□□□ -0.6
CCDC78-209ENST00000474647 SSX2Q16385 188 aa11.29□□□□□ -0.6
CCDC78-209ENST00000474647 OGFRL1Q5TC84 451 aaPredicted RBP11.29□□□□□ -0.6
CCDC78-209ENST00000474647 KDM4DQ6B0I6 523 aa11.29□□□□□ -0.6
CCDC78-209ENST00000474647 C11orf87Q6NUJ2 197 aa11.29□□□□□ -0.6
CCDC78-209ENST00000474647 PLBD1Q6P4A8 553 aa11.29□□□□□ -0.6
CCDC78-209ENST00000474647 Q8N2B8 174 aa11.29□□□□□ -0.6
CCDC78-209ENST00000474647 C11orf42Q8N5U0 333 aa11.29□□□□□ -0.6
CCDC78-209ENST00000474647 POC1AQ8NBT0 407 aa11.29□□□□□ -0.6
CCDC78-209ENST00000474647 OR5A2Q8NGI9 324 aa11.29□□□□□ -0.6
CCDC78-209ENST00000474647 EME1Q96AY2 570 aa11.29□□□□□ -0.6
CCDC78-209ENST00000474647 FOXRED1Q96CU9 486 aaPredicted RBP11.29□□□□□ -0.6
CCDC78-209ENST00000474647 ZNF556Q9HAH1 456 aa11.29□□□□□ -0.6
CCDC78-209ENST00000474647 RASL12Q9NYN1 266 aa11.29□□□□□ -0.6
CCDC78-209ENST00000474647 PITPNC1Q9UKF7 332 aa11.29□□□□□ -0.6
CCDC78-209ENST00000474647 A6NDX4 124 aa11.28□□□□□ -0.6
CCDC78-209ENST00000474647 F2RL2O00254 374 aa11.28□□□□□ -0.6
CCDC78-209ENST00000474647 EI24O14681 340 aa11.28□□□□□ -0.6
CCDC78-209ENST00000474647 SYNGR1O43759 233 aa11.28□□□□□ -0.6
CCDC78-209ENST00000474647 NXPH2O95156 264 aa11.28□□□□□ -0.6
CCDC78-209ENST00000474647 PF4P02776 101 aa11.28□□□□□ -0.6
CCDC78-209ENST00000474647 FAHP16930 419 aa11.28□□□□□ -0.6
CCDC78-209ENST00000474647 PEX2P28328 305 aa11.28□□□□□ -0.6
CCDC78-209ENST00000474647 PRDX2P32119 198 aa11.28□□□□□ -0.6
CCDC78-209ENST00000474647 HAAOP46952 286 aa11.28□□□□□ -0.6
CCDC78-209ENST00000474647 ALDH3A2P51648 485 aa11.28□□□□□ -0.6
CCDC78-209ENST00000474647 RPS7P62081 194 aaKnown RBP11.28□□□□□ -0.6
CCDC78-209ENST00000474647 RIPPLY1Q0D2K3 151 aa11.28□□□□□ -0.6
CCDC78-209ENST00000474647 DYNC1I2Q13409 638 aaKnown RBP11.28□□□□□ -0.6
CCDC78-209ENST00000474647 Q6ZS46 218 aa11.28□□□□□ -0.6
CCDC78-209ENST00000474647 CBR4Q8N4T8 237 aa11.28□□□□□ -0.6
CCDC78-209ENST00000474647 OR13D1Q8NGV5 346 aa11.28□□□□□ -0.6
CCDC78-209ENST00000474647 TTTY10Q9BZA0 68 aa11.28□□□□□ -0.6
CCDC78-209ENST00000474647 LAMP5Q9UJQ1 280 aa11.28□□□□□ -0.6
CCDC78-209ENST00000474647 PIGLQ9Y2B2 252 aa11.28□□□□□ -0.6
CCDC78-209ENST00000474647 TBL2Q9Y4P3 447 aaKnown RBP11.28□□□□□ -0.6
CCDC78-209ENST00000474647 TMEM269A0A1B0GVZ9 245 aa11.27□□□□□ -0.61
CCDC78-209ENST00000474647 FAM90A8PA6NJQ4 464 aa11.27□□□□□ -0.61
CCDC78-209ENST00000474647 K7EIL1 84 aa11.27□□□□□ -0.61
CCDC78-209ENST00000474647 TK1P04183 234 aa11.27□□□□□ -0.61
CCDC78-209ENST00000474647 ALDOBP05062 364 aa11.27□□□□□ -0.61
CCDC78-209ENST00000474647 ALPLP05186 524 aa11.27□□□□□ -0.61
CCDC78-209ENST00000474647 PGA5P0DJD9 388 aa11.27□□□□□ -0.61
CCDC78-209ENST00000474647 JUNBP17275 347 aaPredicted RBP11.27□□□□□ -0.61
CCDC78-209ENST00000474647 HCCSP53701 268 aa11.27□□□□□ -0.61
CCDC78-209ENST00000474647 EDDM3BP56851 147 aa11.27□□□□□ -0.61
CCDC78-209ENST00000474647 BLCAPP62952 87 aa11.27□□□□□ -0.61
CCDC78-209ENST00000474647 ZNF684Q5T5D7 378 aa11.27□□□□□ -0.61
CCDC78-209ENST00000474647 LPCAT4Q643R3 524 aa11.27□□□□□ -0.61
CCDC78-209ENST00000474647 ZBTB49Q6ZSB9 765 aa11.27□□□□□ -0.61
CCDC78-209ENST00000474647 PACRGLQ8N7B6 248 aa11.27□□□□□ -0.61
CCDC78-209ENST00000474647 ASCC1Q8N9N2 400 aaKnown RBP11.27□□□□□ -0.61
CCDC78-209ENST00000474647 OR51E1Q8TCB6 317 aa11.27□□□□□ -0.61
CCDC78-209ENST00000474647 WIPF2Q8TF74 440 aaPredicted RBP11.27□□□□□ -0.61
CCDC78-209ENST00000474647 MALSU1Q96EH3 234 aa11.27□□□□□ -0.61
CCDC78-209ENST00000474647 WNT10AQ9GZT5 417 aa11.27□□□□□ -0.61
CCDC78-209ENST00000474647 GPR84Q9NQS5 396 aa11.27□□□□□ -0.61
CCDC78-209ENST00000474647 C8orf4Q9NR00 106 aa11.27□□□□□ -0.61
CCDC78-209ENST00000474647 PAPOLBQ9NRJ5 636 aaKnown RBP11.27□□□□□ -0.61
CCDC78-209ENST00000474647 KRT84Q9NSB2 600 aa11.27□□□□□ -0.61
CCDC78-209ENST00000474647 FAM206AQ9NX38 181 aa11.27□□□□□ -0.61
CCDC78-209ENST00000474647 ENPP5Q9UJA9 477 aa11.27□□□□□ -0.61
CCDC78-209ENST00000474647 GTF2A1LQ9UNN4 478 aa11.27□□□□□ -0.61
CCDC78-209ENST00000474647 DNAH9Q9NYC9 4486 aa11.26□□□□□ -0.61
CCDC78-209ENST00000474647 A0A0U1RQV5 110 aa11.26□□□□□ -0.61
CCDC78-209ENST00000474647 ODF3BA8MYP8 253 aa11.26□□□□□ -0.61
CCDC78-209ENST00000474647 J3QT63 122 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms