RNA–Protein interactions for RNA: ENST00000469093.1

COL5A1-207, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 670 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-207ENST00000469093 OR5M11Q96RB7 305 aa9.87□□□□□ -0.83
COL5A1-207ENST00000469093 OR8B4Q96RC9 309 aa9.87□□□□□ -0.83
COL5A1-207ENST00000469093 PRSS22Q9GZN4 317 aa9.87□□□□□ -0.83
COL5A1-207ENST00000469093 MUC13Q9H3R2 512 aa9.87□□□□□ -0.83
COL5A1-207ENST00000469093 HES4Q9HCC6 221 aa9.87□□□□□ -0.83
COL5A1-207ENST00000469093 ENPP5Q9UJA9 477 aa9.87□□□□□ -0.83
COL5A1-207ENST00000469093 TBL2Q9Y4P3 447 aaKnown RBP9.87□□□□□ -0.83
COL5A1-207ENST00000469093 NBEAL2Q6ZNJ1 2754 aa9.87□□□□□ -0.83
COL5A1-207ENST00000469093 PQLC2LA1A4F0 135 aa9.86□□□□□ -0.83
COL5A1-207ENST00000469093 ODF3BA8MYP8 253 aa9.86□□□□□ -0.83
COL5A1-207ENST00000469093 J3QT63 122 aa9.86□□□□□ -0.83
COL5A1-207ENST00000469093 K7N7A8 449 aa9.86□□□□□ -0.83
COL5A1-207ENST00000469093 ZNF254O75437 659 aa9.86□□□□□ -0.83
COL5A1-207ENST00000469093 CIB2O75838 187 aa9.86□□□□□ -0.83
COL5A1-207ENST00000469093 DHRS3O75911 302 aa9.86□□□□□ -0.83
COL5A1-207ENST00000469093 NXPH2O95156 264 aa9.86□□□□□ -0.83
COL5A1-207ENST00000469093 CST1P01037 141 aa9.86□□□□□ -0.83
COL5A1-207ENST00000469093 TTRP02766 147 aa9.86□□□□□ -0.83
COL5A1-207ENST00000469093 ARG1P05089 322 aa9.86□□□□□ -0.83
COL5A1-207ENST00000469093 RAP2AP10114 183 aa9.86□□□□□ -0.83
COL5A1-207ENST00000469093 PIPP12273 146 aaPredicted RBP9.86□□□□□ -0.83
COL5A1-207ENST00000469093 OSMP13725 252 aa9.86□□□□□ -0.83
COL5A1-207ENST00000469093 ERVK11-1P61568 191 aa9.86□□□□□ -0.83
COL5A1-207ENST00000469093 APOFQ13790 326 aa9.86□□□□□ -0.83
COL5A1-207ENST00000469093 ZSCAN26Q16670 478 aa9.86□□□□□ -0.83
COL5A1-207ENST00000469093 FOXB2Q5VYV0 432 aa9.86□□□□□ -0.83
COL5A1-207ENST00000469093 TMEM236Q5W0B7 351 aa9.86□□□□□ -0.83
COL5A1-207ENST00000469093 TMEM42Q69YG0 159 aa9.86□□□□□ -0.83
COL5A1-207ENST00000469093 ZNF679Q8IYX0 411 aa9.86□□□□□ -0.83
COL5A1-207ENST00000469093 BATF2Q8N1L9 274 aa9.86□□□□□ -0.83
COL5A1-207ENST00000469093 RPS4Y2Q8TD47 263 aa9.86□□□□□ -0.83
COL5A1-207ENST00000469093 LRGUKQ96M69 825 aa9.86□□□□□ -0.83
COL5A1-207ENST00000469093 ABCB10Q9NRK6 738 aa9.86□□□□□ -0.83
COL5A1-207ENST00000469093 OR14J1Q9UGF5 321 aa9.86□□□□□ -0.83
COL5A1-207ENST00000469093 NUFIP1Q9UHK0 495 aaKnown RBP9.86□□□□□ -0.83
COL5A1-207ENST00000469093 MEX3AA1L020 520 aaKnown RBP9.85□□□□□ -0.83
COL5A1-207ENST00000469093 DLGAP1O14490 977 aa9.85□□□□□ -0.83
COL5A1-207ENST00000469093 PEX14O75381 377 aa9.85□□□□□ -0.83
COL5A1-207ENST00000469093 SRSF10O75494 262 aaKnown RBP9.85□□□□□ -0.83
COL5A1-207ENST00000469093 ZNF728P0DKX0 622 aa9.85□□□□□ -0.83
COL5A1-207ENST00000469093 JUNBP17275 347 aaPredicted RBP9.85□□□□□ -0.83
COL5A1-207ENST00000469093 PRKACGP22612 351 aa9.85□□□□□ -0.83
COL5A1-207ENST00000469093 MPZP25189 248 aa9.85□□□□□ -0.83
COL5A1-207ENST00000469093 DYNLT3P51808 116 aa9.85□□□□□ -0.83
COL5A1-207ENST00000469093 CD83Q01151 205 aa9.85□□□□□ -0.83
COL5A1-207ENST00000469093 MFGE8Q08431 387 aaPredicted RBP9.85□□□□□ -0.83
COL5A1-207ENST00000469093 CLVS2Q5SYC1 327 aa9.85□□□□□ -0.83
COL5A1-207ENST00000469093 ZNF626Q68DY1 528 aa9.85□□□□□ -0.83
COL5A1-207ENST00000469093 ASRGL1Q7L266 308 aa9.85□□□□□ -0.83
COL5A1-207ENST00000469093 ANGPTL5Q86XS5 388 aa9.85□□□□□ -0.83
COL5A1-207ENST00000469093 HS3ST5Q8IZT8 346 aa9.85□□□□□ -0.83
COL5A1-207ENST00000469093 OR13D1Q8NGV5 346 aa9.85□□□□□ -0.83
COL5A1-207ENST00000469093 CCDC124Q96CT7 223 aaKnown RBP9.85□□□□□ -0.83
COL5A1-207ENST00000469093 SLC7A6OSQ96CW6 309 aaPredicted RBP9.85□□□□□ -0.83
COL5A1-207ENST00000469093 OCSTAMPQ9BR26 566 aa9.85□□□□□ -0.83
COL5A1-207ENST00000469093 GPR173Q9NS66 373 aa9.85□□□□□ -0.83
COL5A1-207ENST00000469093 PITPNC1Q9UKF7 332 aa9.85□□□□□ -0.83
COL5A1-207ENST00000469093 COPS3Q9UNS2 423 aa9.85□□□□□ -0.83
COL5A1-207ENST00000469093 SLC22A13Q9Y226 551 aa9.85□□□□□ -0.83
COL5A1-207ENST00000469093 POLDIP2Q9Y2S7 368 aa9.85□□□□□ -0.83
COL5A1-207ENST00000469093 A0A1B0GTI1 187 aa9.84□□□□□ -0.83
COL5A1-207ENST00000469093 CCDC182A6NF36 153 aa9.84□□□□□ -0.83
COL5A1-207ENST00000469093 A6NIN4 97 aa9.84□□□□□ -0.83
COL5A1-207ENST00000469093 MAGEB4O15481 346 aaPredicted RBP9.84□□□□□ -0.83
COL5A1-207ENST00000469093 ZNF737O75373 536 aa9.84□□□□□ -0.83
COL5A1-207ENST00000469093 RBP4P02753 201 aa9.84□□□□□ -0.83
COL5A1-207ENST00000469093 MRPL3P09001 348 aaKnown RBP9.84□□□□□ -0.83
COL5A1-207ENST00000469093 IGHV1-8P0DP01 117 aa9.84□□□□□ -0.83
COL5A1-207ENST00000469093 IGLL1P15814 213 aa9.84□□□□□ -0.83
COL5A1-207ENST00000469093 RIDAP52758 137 aaKnown RBP9.84□□□□□ -0.83
COL5A1-207ENST00000469093 COL10A1Q03692 680 aa9.84□□□□□ -0.83
COL5A1-207ENST00000469093 ZNF829Q3KNS6 432 aaPredicted RBP9.84□□□□□ -0.83
COL5A1-207ENST00000469093 LCN1P1Q5VSP4 162 aa9.84□□□□□ -0.83
COL5A1-207ENST00000469093 ELMOD2Q8IZ81 293 aa9.84□□□□□ -0.83
COL5A1-207ENST00000469093 ADGRG5Q8IZF4 528 aa9.84□□□□□ -0.83
COL5A1-207ENST00000469093 OR5AU1Q8NGC0 362 aa9.84□□□□□ -0.83
COL5A1-207ENST00000469093 OR14K1Q8NGZ2 314 aa9.84□□□□□ -0.83
COL5A1-207ENST00000469093 ASB17Q8WXJ9 295 aa9.84□□□□□ -0.83
COL5A1-207ENST00000469093 FOXRED1Q96CU9 486 aaPredicted RBP9.84□□□□□ -0.83
COL5A1-207ENST00000469093 TTTY10Q9BZA0 68 aa9.84□□□□□ -0.83
COL5A1-207ENST00000469093 ZNF556Q9HAH1 456 aa9.84□□□□□ -0.83
COL5A1-207ENST00000469093 TVP23BQ9NYZ1 205 aa9.84□□□□□ -0.83
COL5A1-207ENST00000469093 TMEM14AQ9Y6G1 99 aa9.84□□□□□ -0.83
COL5A1-207ENST00000469093 V9GYS6 101 aa9.84□□□□□ -0.83
COL5A1-207ENST00000469093 ERICH4A6NGS2 130 aa9.83□□□□□ -0.84
COL5A1-207ENST00000469093 FAM90A22PA8MWA6 464 aa9.83□□□□□ -0.84
COL5A1-207ENST00000469093 F8VVB4 439 aa9.83□□□□□ -0.84
COL5A1-207ENST00000469093 F8VWA3 439 aa9.83□□□□□ -0.84
COL5A1-207ENST00000469093 GNGT2O14610 69 aa9.83□□□□□ -0.84
COL5A1-207ENST00000469093 E2F6O75461 281 aa9.83□□□□□ -0.84
COL5A1-207ENST00000469093 MPIG6BO95866 241 aa9.83□□□□□ -0.84
COL5A1-207ENST00000469093 CHRM2P08172 466 aa9.83□□□□□ -0.84
COL5A1-207ENST00000469093 CD33P20138 364 aa9.83□□□□□ -0.84
COL5A1-207ENST00000469093 OR12D2P58182 307 aa9.83□□□□□ -0.84
COL5A1-207ENST00000469093 ESRRGP62508 458 aa9.83□□□□□ -0.84
COL5A1-207ENST00000469093 IL24Q13007 206 aa9.83□□□□□ -0.84
COL5A1-207ENST00000469093 DYNC1I2Q13409 638 aaKnown RBP9.83□□□□□ -0.84
COL5A1-207ENST00000469093 SNAPC1Q16533 368 aa9.83□□□□□ -0.84
COL5A1-207ENST00000469093 TMEM95Q3KNT9 176 aa9.83□□□□□ -0.84
COL5A1-207ENST00000469093 VAX1Q5SQQ9 334 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms