RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 WDR86Q86TI4 376 aa20.81■□□□□ 0.92
U2AF1-204ENST00000459639 SPERTQ8NA61 448 aa20.81■□□□□ 0.92
U2AF1-204ENST00000459639 OR13G1Q8NGZ3 307 aa20.81■□□□□ 0.92
U2AF1-204ENST00000459639 ARHGAP5-AS1Q96IT6 56 aa20.81■□□□□ 0.92
U2AF1-204ENST00000459639 CNTNAP3BQ96NU0 1288 aa20.81■□□□□ 0.92
U2AF1-204ENST00000459639 NEDD4LQ96PU5 975 aa20.81■□□□□ 0.92
U2AF1-204ENST00000459639 CNTNAP3Q9BZ76 1288 aa20.81■□□□□ 0.92
U2AF1-204ENST00000459639 ELF5Q9UKW6 265 aaPredicted RBP20.81■□□□□ 0.92
U2AF1-204ENST00000459639 IGLV3-9A0A075B6K5 115 aa20.8■□□□□ 0.92
U2AF1-204ENST00000459639 FAM240BA0A1B0GVZ2 78 aa20.8■□□□□ 0.92
U2AF1-204ENST00000459639 TRAPPC2LH3BP13 241 aa20.8■□□□□ 0.92
U2AF1-204ENST00000459639 KIR2DL3P43628 341 aa20.8■□□□□ 0.92
U2AF1-204ENST00000459639 NPBWR2P48146 333 aa20.8■□□□□ 0.92
U2AF1-204ENST00000459639 RBM11P57052 281 aaKnown RBP20.8■□□□□ 0.92
U2AF1-204ENST00000459639 BSPH1Q075Z2 132 aa20.8■□□□□ 0.92
U2AF1-204ENST00000459639 Q6ZR03 302 aa20.8■□□□□ 0.92
U2AF1-204ENST00000459639 FBXL14Q8N1E6 418 aa20.8■□□□□ 0.92
U2AF1-204ENST00000459639 PIAS4Q8N2W9 510 aaPredicted RBP20.8■□□□□ 0.92
U2AF1-204ENST00000459639 DUSP18Q8NEJ0 188 aa20.8■□□□□ 0.92
U2AF1-204ENST00000459639 CXXC4Q9H2H0 198 aa20.8■□□□□ 0.92
U2AF1-204ENST00000459639 MTCH1Q9NZJ7 389 aa20.8■□□□□ 0.92
U2AF1-204ENST00000459639 CADP27708 2225 aa20.8■□□□□ 0.92
U2AF1-204ENST00000459639 NBEAQ8NFP9 2946 aa20.8■□□□□ 0.92
U2AF1-204ENST00000459639 NAP1L6A6NFF2 107 aa20.8■□□□□ 0.92
U2AF1-204ENST00000459639 H0YL77 283 aa20.8■□□□□ 0.92
U2AF1-204ENST00000459639 ABCD4O14678 606 aa20.8■□□□□ 0.92
U2AF1-204ENST00000459639 SYNGR1O43759 233 aa20.8■□□□□ 0.92
U2AF1-204ENST00000459639 BCL3P20749 454 aa20.8■□□□□ 0.92
U2AF1-204ENST00000459639 GABRR1P24046 479 aa20.8■□□□□ 0.92
U2AF1-204ENST00000459639 SLC6A1P30531 599 aa20.8■□□□□ 0.92
U2AF1-204ENST00000459639 PCGF3Q3KNV8 242 aa20.8■□□□□ 0.92
U2AF1-204ENST00000459639 C4orf17Q53FE4 359 aa20.8■□□□□ 0.92
U2AF1-204ENST00000459639 OLFML2AQ68BL7 652 aa20.8■□□□□ 0.92
U2AF1-204ENST00000459639 PRR7Q8TB68 274 aa20.8■□□□□ 0.92
U2AF1-204ENST00000459639 RHOFQ9HBH0 211 aa20.8■□□□□ 0.92
U2AF1-204ENST00000459639 KCNJ16Q9NPI9 418 aa20.8■□□□□ 0.92
U2AF1-204ENST00000459639 ZNF107Q9UII5 783 aaPredicted RBP20.8■□□□□ 0.92
U2AF1-204ENST00000459639 KCNK7Q9Y2U2 307 aa20.8■□□□□ 0.92
U2AF1-204ENST00000459639 USP24Q9UPU5 2620 aa20.79■□□□□ 0.92
U2AF1-204ENST00000459639 MEIS3P1A6NDR6 274 aa20.79■□□□□ 0.92
U2AF1-204ENST00000459639 BTCP35070 178 aa20.79■□□□□ 0.92
U2AF1-204ENST00000459639 FGF12P61328 243 aa20.79■□□□□ 0.92
U2AF1-204ENST00000459639 TAF9Q16594 264 aa20.79■□□□□ 0.92
U2AF1-204ENST00000459639 PIGYQ3MUY2 71 aa20.79■□□□□ 0.92
U2AF1-204ENST00000459639 NHLRC3Q5JS37 347 aa20.79■□□□□ 0.92
U2AF1-204ENST00000459639 VHLLQ6RSH7 139 aa20.79■□□□□ 0.92
U2AF1-204ENST00000459639 RTN4RL2Q86UN3 420 aa20.79■□□□□ 0.92
U2AF1-204ENST00000459639 OR10AD1Q8NGE0 317 aa20.79■□□□□ 0.92
U2AF1-204ENST00000459639 PECRQ9BY49 303 aa20.79■□□□□ 0.92
U2AF1-204ENST00000459639 HRASLSQ9HDD0 168 aa20.79■□□□□ 0.92
U2AF1-204ENST00000459639 NDRG3Q9UGV2 375 aa20.79■□□□□ 0.92
U2AF1-204ENST00000459639 DUSP13Q9UII6 198 aa20.79■□□□□ 0.92
U2AF1-204ENST00000459639 ST3GAL6Q9Y274 331 aa20.79■□□□□ 0.92
U2AF1-204ENST00000459639 POLDIP2Q9Y2S7 368 aa20.79■□□□□ 0.92
U2AF1-204ENST00000459639 FAM90A10PA6NDY2 464 aa20.78■□□□□ 0.92
U2AF1-204ENST00000459639 FAM90A18PA6NE21 464 aa20.78■□□□□ 0.92
U2AF1-204ENST00000459639 FAM90A16PA6NEW6 464 aa20.78■□□□□ 0.92
U2AF1-204ENST00000459639 FAM90A20PA6NIJ5 464 aa20.78■□□□□ 0.92
U2AF1-204ENST00000459639 FAM90A8PA6NJQ4 464 aa20.78■□□□□ 0.92
U2AF1-204ENST00000459639 FAM90A7PA6NKC0 464 aa20.78■□□□□ 0.92
U2AF1-204ENST00000459639 SERPINE3A8MV23 424 aa20.78■□□□□ 0.92
U2AF1-204ENST00000459639 FAM90A22PA8MWA6 464 aa20.78■□□□□ 0.92
U2AF1-204ENST00000459639 FAM90A12PA8MX19 464 aa20.78■□□□□ 0.92
U2AF1-204ENST00000459639 FAM90A5PA8MXJ8 464 aa20.78■□□□□ 0.92
U2AF1-204ENST00000459639 FAM90A23PA8MXZ1 464 aa20.78■□□□□ 0.92
U2AF1-204ENST00000459639 FAM90A15PP0C7V4 464 aa20.78■□□□□ 0.92
U2AF1-204ENST00000459639 FAM90A13PP0C7W8 464 aa20.78■□□□□ 0.92
U2AF1-204ENST00000459639 FAM90A14PP0C7W9 464 aa20.78■□□□□ 0.92
U2AF1-204ENST00000459639 FAM90A24PP0C7X0 464 aa20.78■□□□□ 0.92
U2AF1-204ENST00000459639 GNG2P59768 71 aa20.78■□□□□ 0.92
U2AF1-204ENST00000459639 MZT1Q08AG7 82 aa20.78■□□□□ 0.92
U2AF1-204ENST00000459639 ZNF154Q13106 437 aa20.78■□□□□ 0.92
U2AF1-204ENST00000459639 TRAPPC6BQ86SZ2 158 aa20.78■□□□□ 0.92
U2AF1-204ENST00000459639 LRP11Q86VZ4 500 aa20.78■□□□□ 0.92
U2AF1-204ENST00000459639 NUDCD2Q8WVJ2 157 aa20.78■□□□□ 0.92
U2AF1-204ENST00000459639 ST8SIA4Q92187 359 aa20.78■□□□□ 0.92
U2AF1-204ENST00000459639 HSF4Q9ULV5 492 aa20.78■□□□□ 0.92
U2AF1-204ENST00000459639 PRSS44E7EML9 344 aa20.77■□□□□ 0.92
U2AF1-204ENST00000459639 CA11O75493 328 aa20.77■□□□□ 0.92
U2AF1-204ENST00000459639 RCVRNP35243 200 aa20.77■□□□□ 0.92
U2AF1-204ENST00000459639 FAUP35544 74 aaKnown RBP20.77■□□□□ 0.92
U2AF1-204ENST00000459639 SELENOVP59797 346 aa20.77■□□□□ 0.92
U2AF1-204ENST00000459639 SLC22A25Q6T423 547 aa20.77■□□□□ 0.92
U2AF1-204ENST00000459639 SCCPDHQ8NBX0 429 aa20.77■□□□□ 0.92
U2AF1-204ENST00000459639 ESRP2Q9H6T0 727 aaKnown RBP20.77■□□□□ 0.92
U2AF1-204ENST00000459639 ZNF442Q9H7R0 627 aa20.77■□□□□ 0.92
U2AF1-204ENST00000459639 MSL2Q9HCI7 577 aa20.77■□□□□ 0.92
U2AF1-204ENST00000459639 CA10Q9NS85 328 aa20.77■□□□□ 0.92
U2AF1-204ENST00000459639 GEMIN2O14893 280 aaKnown RBP20.77■□□□□ 0.91
U2AF1-204ENST00000459639 MT-ND4P03905 459 aa20.77■□□□□ 0.91
U2AF1-204ENST00000459639 GNLYP22749 145 aa20.77■□□□□ 0.91
U2AF1-204ENST00000459639 CDSNQ15517 529 aa20.77■□□□□ 0.91
U2AF1-204ENST00000459639 IGFBP7Q16270 282 aa20.77■□□□□ 0.91
U2AF1-204ENST00000459639 PLA1AQ53H76 456 aa20.77■□□□□ 0.91
U2AF1-204ENST00000459639 NCMAPQ5T1S8 102 aa20.77■□□□□ 0.91
U2AF1-204ENST00000459639 SIGIRRQ6IA17 410 aa20.77■□□□□ 0.91
U2AF1-204ENST00000459639 PLET1Q6UQ28 207 aa20.77■□□□□ 0.91
U2AF1-204ENST00000459639 TMEM229BQ8NBD8 167 aa20.77■□□□□ 0.91
U2AF1-204ENST00000459639 MRPL24Q96A35 216 aaKnown RBP20.77■□□□□ 0.91
U2AF1-204ENST00000459639 PLK3Q9H4B4 646 aa20.77■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms