RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 OR11H12B2RN74 326 aa7.76□□□□□ -1.17
CACNA1C-220ENST00000399655 HYAL3O43820 417 aaPredicted RBP7.76□□□□□ -1.17
CACNA1C-220ENST00000399655 TMIGD3P0DMS9 266 aaPredicted RBP7.76□□□□□ -1.17
CACNA1C-220ENST00000399655 OR11H1Q8NG94 326 aa7.76□□□□□ -1.17
CACNA1C-220ENST00000399655 OR11H2Q8NH07 326 aa7.76□□□□□ -1.17
CACNA1C-220ENST00000399655 S1PR5Q9H228 398 aa7.76□□□□□ -1.17
CACNA1C-220ENST00000399655 IL19Q9UHD0 177 aa7.76□□□□□ -1.17
CACNA1C-220ENST00000399655 FRMPD1Q5SYB0 1578 aa7.76□□□□□ -1.17
CACNA1C-220ENST00000399655 DLX6P56179 175 aa7.76□□□□□ -1.17
CACNA1C-220ENST00000399655 DUSP5Q16690 384 aa7.76□□□□□ -1.17
CACNA1C-220ENST00000399655 ZDHHC24Q6UX98 284 aa7.76□□□□□ -1.17
CACNA1C-220ENST00000399655 PRSS42Q7Z5A4 293 aa7.76□□□□□ -1.17
CACNA1C-220ENST00000399655 ARRDC1Q8N5I2 433 aa7.76□□□□□ -1.17
CACNA1C-220ENST00000399655 ESAMQ96AP7 390 aa7.76□□□□□ -1.17
CACNA1C-220ENST00000399655 CLN8Q9UBY8 286 aa7.76□□□□□ -1.17
CACNA1C-220ENST00000399655 CD74P04233 296 aa7.76□□□□□ -1.17
CACNA1C-220ENST00000399655 HLA-DRB3P79483 266 aa7.76□□□□□ -1.17
CACNA1C-220ENST00000399655 RGNQ15493 299 aa7.76□□□□□ -1.17
CACNA1C-220ENST00000399655 SPICQ8N5J4 248 aa7.76□□□□□ -1.17
CACNA1C-220ENST00000399655 MMP17Q9ULZ9 603 aa7.76□□□□□ -1.17
CACNA1C-220ENST00000399655 NEXMIFQ5QGS0 1516 aa7.76□□□□□ -1.17
CACNA1C-220ENST00000399655 TRAV27A0A087WT01 109 aa7.76□□□□□ -1.17
CACNA1C-220ENST00000399655 ZNF487B1APH4 448 aa7.76□□□□□ -1.17
CACNA1C-220ENST00000399655 NAPSAO96009 420 aa7.76□□□□□ -1.17
CACNA1C-220ENST00000399655 SEC11BP0C7V7 166 aa7.76□□□□□ -1.17
CACNA1C-220ENST00000399655 DCAF12Q5T6F0 453 aa7.76□□□□□ -1.17
CACNA1C-220ENST00000399655 C20orf196Q8IYI0 205 aa7.76□□□□□ -1.17
CACNA1C-220ENST00000399655 ZBTB45Q96K62 511 aaPredicted RBP7.76□□□□□ -1.17
CACNA1C-220ENST00000399655 MEX3AA1L020 520 aaKnown RBP7.76□□□□□ -1.17
CACNA1C-220ENST00000399655 VWC2LB2RUY7 222 aa7.76□□□□□ -1.17
CACNA1C-220ENST00000399655 MBTPS2O43462 519 aa7.76□□□□□ -1.17
CACNA1C-220ENST00000399655 PSG2P11465 335 aa7.76□□□□□ -1.17
CACNA1C-220ENST00000399655 ACSM5Q6NUN0 579 aa7.76□□□□□ -1.17
CACNA1C-220ENST00000399655 CBARPQ8N350 705 aaPredicted RBP7.76□□□□□ -1.17
CACNA1C-220ENST00000399655 SPG11Q96JI7 2443 aa7.76□□□□□ -1.17
CACNA1C-220ENST00000399655 SPINK4O60575 86 aa7.76□□□□□ -1.17
CACNA1C-220ENST00000399655 TSPOP30536 169 aa7.76□□□□□ -1.17
CACNA1C-220ENST00000399655 ARRB2P32121 409 aa7.76□□□□□ -1.17
CACNA1C-220ENST00000399655 TSPAN31Q12999 210 aa7.76□□□□□ -1.17
CACNA1C-220ENST00000399655 SLC25A15Q9Y619 301 aa7.76□□□□□ -1.17
CACNA1C-220ENST00000399655 CA10Q9NS85 328 aa7.75□□□□□ -1.17
CACNA1C-220ENST00000399655 SERTM1A2A2V5 107 aa7.75□□□□□ -1.17
CACNA1C-220ENST00000399655 PRRG2O14669 202 aa7.75□□□□□ -1.17
CACNA1C-220ENST00000399655 GP1BAP07359 652 aa7.75□□□□□ -1.17
CACNA1C-220ENST00000399655 WNT5AP41221 380 aa7.75□□□□□ -1.17
CACNA1C-220ENST00000399655 TMEM176BQ3YBM2 270 aaPredicted RBP7.75□□□□□ -1.17
CACNA1C-220ENST00000399655 FAM71CQ8NEG0 241 aa7.75□□□□□ -1.17
CACNA1C-220ENST00000399655 PLIN4Q96Q06 1357 aa7.75□□□□□ -1.17
CACNA1C-220ENST00000399655 DDNO94850 711 aaPredicted RBP7.75□□□□□ -1.17
CACNA1C-220ENST00000399655 MYBPHQ13203 477 aa7.75□□□□□ -1.17
CACNA1C-220ENST00000399655 BTLAQ7Z6A9 289 aa7.75□□□□□ -1.17
CACNA1C-220ENST00000399655 OXGR1Q96P68 337 aa7.75□□□□□ -1.17
CACNA1C-220ENST00000399655 WNT9BO14905 357 aa7.75□□□□□ -1.17
CACNA1C-220ENST00000399655 KBTBD11O94819 623 aa7.75□□□□□ -1.17
CACNA1C-220ENST00000399655 CDC20Q12834 499 aa7.75□□□□□ -1.17
CACNA1C-220ENST00000399655 NR0B2Q15466 257 aa7.75□□□□□ -1.17
CACNA1C-220ENST00000399655 OR10J3Q5JRS4 329 aa7.75□□□□□ -1.17
CACNA1C-220ENST00000399655 ARL14EPQ8N8R7 260 aaPredicted RBP7.75□□□□□ -1.17
CACNA1C-220ENST00000399655 ONECUT1Q9UBC0 465 aa7.75□□□□□ -1.17
CACNA1C-220ENST00000399655 SLCO3A1Q9UIG8 710 aa7.75□□□□□ -1.17
CACNA1C-220ENST00000399655 ZNF391Q9UJN7 358 aa7.75□□□□□ -1.17
CACNA1C-220ENST00000399655 A0A1W2PS18 150 aa7.75□□□□□ -1.17
CACNA1C-220ENST00000399655 SLC35E3Q7Z769 313 aa7.75□□□□□ -1.17
CACNA1C-220ENST00000399655 C4orf32Q8N8J7 132 aa7.75□□□□□ -1.17
CACNA1C-220ENST00000399655 FAM157AC9JC47 383 aa7.75□□□□□ -1.17
CACNA1C-220ENST00000399655 SOD1P00441 154 aa7.75□□□□□ -1.17
CACNA1C-220ENST00000399655 HRH1P35367 487 aa7.75□□□□□ -1.17
CACNA1C-220ENST00000399655 UBE2V2Q15819 145 aa7.75□□□□□ -1.17
CACNA1C-220ENST00000399655 HYAL4Q2M3T9 481 aa7.75□□□□□ -1.17
CACNA1C-220ENST00000399655 Q6ZVU0 165 aa7.75□□□□□ -1.17
CACNA1C-220ENST00000399655 MYOZ1Q9NP98 299 aaPredicted RBP7.75□□□□□ -1.17
CACNA1C-220ENST00000399655 PHRF1Q9P1Y6 1649 aaKnown RBP7.75□□□□□ -1.17
CACNA1C-220ENST00000399655 ADAP1O75689 374 aa7.75□□□□□ -1.17
CACNA1C-220ENST00000399655 EGR3Q06889 387 aa7.75□□□□□ -1.17
CACNA1C-220ENST00000399655 HAPLN4Q86UW8 402 aa7.75□□□□□ -1.17
CACNA1C-220ENST00000399655 SLC25A42Q86VD7 318 aa7.75□□□□□ -1.17
CACNA1C-220ENST00000399655 DNASE2BQ8WZ79 361 aa7.75□□□□□ -1.17
CACNA1C-220ENST00000399655 MSL2Q9HCI7 577 aa7.75□□□□□ -1.17
CACNA1C-220ENST00000399655 STARD5Q9NSY2 213 aa7.75□□□□□ -1.17
CACNA1C-220ENST00000399655 FCGR2BP31994 310 aaPredicted RBP7.75□□□□□ -1.17
CACNA1C-220ENST00000399655 LYZP61626 148 aa7.75□□□□□ -1.17
CACNA1C-220ENST00000399655 FKBP1CQ5VVH2 108 aa7.75□□□□□ -1.17
CACNA1C-220ENST00000399655 DNAJC30Q96LL9 226 aa7.75□□□□□ -1.17
CACNA1C-220ENST00000399655 RBFOX3A6NFN3 312 aa7.75□□□□□ -1.17
CACNA1C-220ENST00000399655 PMP22Q01453 160 aa7.75□□□□□ -1.17
CACNA1C-220ENST00000399655 CLDN23Q96B33 292 aa7.75□□□□□ -1.17
CACNA1C-220ENST00000399655 LPAR2Q9HBW0 351 aa7.75□□□□□ -1.17
CACNA1C-220ENST00000399655 G6PC2Q9NQR9 355 aa7.75□□□□□ -1.17
CACNA1C-220ENST00000399655 SLCO1C1Q9NYB5 712 aa7.75□□□□□ -1.17
CACNA1C-220ENST00000399655 VAX2Q9UIW0 290 aa7.75□□□□□ -1.17
CACNA1C-220ENST00000399655 SLIT1O75093 1534 aa7.75□□□□□ -1.17
CACNA1C-220ENST00000399655 RNF17Q9BXT8 1623 aaKnown RBP7.75□□□□□ -1.17
CACNA1C-220ENST00000399655 APOMO95445 188 aa7.75□□□□□ -1.17
CACNA1C-220ENST00000399655 RPL27P61353 136 aaKnown RBP7.75□□□□□ -1.17
CACNA1C-220ENST00000399655 SNAI3Q3KNW1 292 aa7.75□□□□□ -1.17
CACNA1C-220ENST00000399655 CFAP161Q6P656 301 aa7.75□□□□□ -1.17
CACNA1C-220ENST00000399655 DUSP18Q8NEJ0 188 aa7.74□□□□□ -1.17
CACNA1C-220ENST00000399655 OR2Y1Q8NGV0 311 aa7.74□□□□□ -1.17
CACNA1C-220ENST00000399655 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.74□□□□□ -1.17
CACNA1C-220ENST00000399655 TAPBPO15533 448 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms