RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 SLC35G3Q8N808 338 aa12.96□□□□□ -0.33
RPRD1A-202ENST00000399022 TSPAN32Q96QS1 320 aa12.96□□□□□ -0.33
RPRD1A-202ENST00000399022 ARV1Q9H2C2 271 aa12.96□□□□□ -0.33
RPRD1A-202ENST00000399022 PCOLCE2Q9UKZ9 415 aa12.96□□□□□ -0.33
RPRD1A-202ENST00000399022 IGHV1OR15-9A0A0B4J2B8 117 aa12.96□□□□□ -0.33
RPRD1A-202ENST00000399022 EPOPA6NHQ4 379 aa12.96□□□□□ -0.33
RPRD1A-202ENST00000399022 SOX15O60248 233 aa12.96□□□□□ -0.33
RPRD1A-202ENST00000399022 MPZL1O95297 269 aa12.96□□□□□ -0.33
RPRD1A-202ENST00000399022 TBX6O95947 436 aaPredicted RBP12.96□□□□□ -0.33
RPRD1A-202ENST00000399022 CDX1P47902 265 aaPredicted RBP12.96□□□□□ -0.33
RPRD1A-202ENST00000399022 SSR4P51571 173 aa12.96□□□□□ -0.33
RPRD1A-202ENST00000399022 DHODHQ02127 395 aa12.96□□□□□ -0.33
RPRD1A-202ENST00000399022 BAXQ07812 192 aa12.96□□□□□ -0.33
RPRD1A-202ENST00000399022 DRAM2Q6UX65 266 aa12.96□□□□□ -0.33
RPRD1A-202ENST00000399022 FAM103A1Q9BTL3 118 aaKnown RBP12.96□□□□□ -0.33
RPRD1A-202ENST00000399022 ENY2Q9NPA8 101 aa12.96□□□□□ -0.33
RPRD1A-202ENST00000399022 NCOR1O75376 2440 aa12.96□□□□□ -0.33
RPRD1A-202ENST00000399022 ZNF141Q15928 474 aa12.96□□□□□ -0.34
RPRD1A-202ENST00000399022 AAED1Q7RTV5 226 aa12.96□□□□□ -0.34
RPRD1A-202ENST00000399022 OR1N1Q8NGS0 311 aa12.96□□□□□ -0.34
RPRD1A-202ENST00000399022 REEP6Q96HR9 211 aa12.96□□□□□ -0.34
RPRD1A-202ENST00000399022 MS4A10Q96PG2 267 aa12.96□□□□□ -0.34
RPRD1A-202ENST00000399022 CNOT1A5YKK6 2376 aaKnown RBP12.95□□□□□ -0.34
RPRD1A-202ENST00000399022 HSBP1L1C9JCN9 74 aa12.95□□□□□ -0.34
RPRD1A-202ENST00000399022 EFEMP2O95967 443 aa12.95□□□□□ -0.34
RPRD1A-202ENST00000399022 CT45A8P0DMV1 189 aa12.95□□□□□ -0.34
RPRD1A-202ENST00000399022 CT45A9P0DMV2 189 aa12.95□□□□□ -0.34
RPRD1A-202ENST00000399022 GAMTQ14353 236 aa12.95□□□□□ -0.34
RPRD1A-202ENST00000399022 PNLIPRP3Q17RR3 467 aa12.95□□□□□ -0.34
RPRD1A-202ENST00000399022 MICBQ29980 383 aa12.95□□□□□ -0.34
RPRD1A-202ENST00000399022 CT45A2Q5DJT8 189 aa12.95□□□□□ -0.34
RPRD1A-202ENST00000399022 RPS19BP1Q86WX3 136 aaKnown RBP12.95□□□□□ -0.34
RPRD1A-202ENST00000399022 ZSCAN4Q8NAM6 433 aaPredicted RBP12.95□□□□□ -0.34
RPRD1A-202ENST00000399022 OR5C1Q8NGR4 320 aa12.95□□□□□ -0.34
RPRD1A-202ENST00000399022 APOBEC4Q8WW27 367 aaKnown RBP12.95□□□□□ -0.34
RPRD1A-202ENST00000399022 TMEM184BQ9Y519 407 aaPredicted RBP12.95□□□□□ -0.34
RPRD1A-202ENST00000399022 IGHV1OR21-1A0A087WYE8 117 aa12.95□□□□□ -0.34
RPRD1A-202ENST00000399022 IGHV3-15A0A0B4J1V0 119 aa12.95□□□□□ -0.34
RPRD1A-202ENST00000399022 ZNF816-ZNF321PA0A0X1KG74 233 aa12.95□□□□□ -0.34
RPRD1A-202ENST00000399022 NDUFA2O43678 99 aa12.95□□□□□ -0.34
RPRD1A-202ENST00000399022 IGKV1D-16P01601 117 aa12.95□□□□□ -0.34
RPRD1A-202ENST00000399022 CTLA4P16410 223 aa12.95□□□□□ -0.34
RPRD1A-202ENST00000399022 COA4Q9NYJ1 87 aa12.95□□□□□ -0.34
RPRD1A-202ENST00000399022 HSF4Q9ULV5 492 aa12.95□□□□□ -0.34
RPRD1A-202ENST00000399022 SOCS1O15524 211 aa12.95□□□□□ -0.34
RPRD1A-202ENST00000399022 EFSO43281 561 aa12.95□□□□□ -0.34
RPRD1A-202ENST00000399022 SRSF3P84103 164 aaKnown RBP12.95□□□□□ -0.34
RPRD1A-202ENST00000399022 SLC16A14Q7RTX9 510 aa12.95□□□□□ -0.34
RPRD1A-202ENST00000399022 TIPARPQ7Z3E1 657 aaKnown RBP12.95□□□□□ -0.34
RPRD1A-202ENST00000399022 ASB5Q8WWX0 329 aa12.95□□□□□ -0.34
RPRD1A-202ENST00000399022 KISS1RQ969F8 398 aaPredicted RBP12.95□□□□□ -0.34
RPRD1A-202ENST00000399022 TRAV14DV4A0A0A6YYC5 116 aa12.95□□□□□ -0.34
RPRD1A-202ENST00000399022 CDAP32320 146 aa12.95□□□□□ -0.34
RPRD1A-202ENST00000399022 CASP6P55212 293 aa12.95□□□□□ -0.34
RPRD1A-202ENST00000399022 YRDCQ86U90 279 aaKnown RBP12.95□□□□□ -0.34
RPRD1A-202ENST00000399022 CDC20BQ86Y33 519 aa12.95□□□□□ -0.34
RPRD1A-202ENST00000399022 TGIF2LXQ8IUE1 241 aa12.95□□□□□ -0.34
RPRD1A-202ENST00000399022 IL22RA2Q969J5 263 aa12.95□□□□□ -0.34
RPRD1A-202ENST00000399022 PLEKHF2Q9H8W4 249 aa12.95□□□□□ -0.34
RPRD1A-202ENST00000399022 KCNE5Q9UJ90 142 aa12.95□□□□□ -0.34
RPRD1A-202ENST00000399022 FOXS1O43638 330 aa12.94□□□□□ -0.34
RPRD1A-202ENST00000399022 ERVS71-1P61550 626 aa12.94□□□□□ -0.34
RPRD1A-202ENST00000399022 OR8G1Q15617 311 aa12.94□□□□□ -0.34
RPRD1A-202ENST00000399022 VAMP3Q15836 100 aa12.94□□□□□ -0.34
RPRD1A-202ENST00000399022 SPANXN5Q5MJ07 72 aa12.94□□□□□ -0.34
RPRD1A-202ENST00000399022 MRPL21Q7Z2W9 205 aaKnown RBP12.94□□□□□ -0.34
RPRD1A-202ENST00000399022 LURAP1LQ8IV03 231 aa12.94□□□□□ -0.34
RPRD1A-202ENST00000399022 MKXQ8IYA7 352 aa12.94□□□□□ -0.34
RPRD1A-202ENST00000399022 OR2C3Q8N628 320 aa12.94□□□□□ -0.34
RPRD1A-202ENST00000399022 MRPL24Q96A35 216 aaKnown RBP12.94□□□□□ -0.34
RPRD1A-202ENST00000399022 BORCS7Q96B45 105 aa12.94□□□□□ -0.34
RPRD1A-202ENST00000399022 PILRAQ9UKJ1 303 aa12.94□□□□□ -0.34
RPRD1A-202ENST00000399022 MRPS18BQ9Y676 258 aaKnown RBP12.94□□□□□ -0.34
RPRD1A-202ENST00000399022 G3V3Q6 166 aa12.94□□□□□ -0.34
RPRD1A-202ENST00000399022 IGHV4-34P06331 123 aa12.94□□□□□ -0.34
RPRD1A-202ENST00000399022 TCN2P20062 427 aa12.94□□□□□ -0.34
RPRD1A-202ENST00000399022 BCKDHBP21953 392 aa12.94□□□□□ -0.34
RPRD1A-202ENST00000399022 ACKR3P25106 362 aa12.94□□□□□ -0.34
RPRD1A-202ENST00000399022 SMAD4Q13485 552 aaKnown RBP12.94□□□□□ -0.34
RPRD1A-202ENST00000399022 PDLIM3Q53GG5 364 aaPredicted RBP12.94□□□□□ -0.34
RPRD1A-202ENST00000399022 UNQ9370/PRO34162Q6UXP9 181 aa12.94□□□□□ -0.34
RPRD1A-202ENST00000399022 RPS4Y2Q8TD47 263 aa12.94□□□□□ -0.34
RPRD1A-202ENST00000399022 AUP1Q9Y679 476 aa12.94□□□□□ -0.34
RPRD1A-202ENST00000399022 RNF222A6NCQ9 220 aa12.94□□□□□ -0.34
RPRD1A-202ENST00000399022 ST8SIA5O15466 376 aa12.94□□□□□ -0.34
RPRD1A-202ENST00000399022 ACAA2P42765 397 aaKnown RBP12.94□□□□□ -0.34
RPRD1A-202ENST00000399022 KRTDAPP60985 99 aa12.94□□□□□ -0.34
RPRD1A-202ENST00000399022 GAB4Q2WGN9 574 aa12.94□□□□□ -0.34
RPRD1A-202ENST00000399022 TSPO2Q5TGU0 170 aa12.94□□□□□ -0.34
RPRD1A-202ENST00000399022 SLC22A18ASQ8N1D0 253 aa12.94□□□□□ -0.34
RPRD1A-202ENST00000399022 VAMP8Q9BV40 100 aa12.94□□□□□ -0.34
RPRD1A-202ENST00000399022 AICDAQ9GZX7 198 aa12.94□□□□□ -0.34
RPRD1A-202ENST00000399022 TMEM74BQ9NUR3 256 aa12.94□□□□□ -0.34
RPRD1A-202ENST00000399022 HEATR5BQ9P2D3 2071 aa12.94□□□□□ -0.34
RPRD1A-202ENST00000399022 A0A1W2PNV4 684 aa12.93□□□□□ -0.34
RPRD1A-202ENST00000399022 ANKUB1A6NFN9 424 aa12.93□□□□□ -0.34
RPRD1A-202ENST00000399022 NPIPB9F8W1W9 429 aa12.93□□□□□ -0.34
RPRD1A-202ENST00000399022 SLC31A2O15432 143 aa12.93□□□□□ -0.34
RPRD1A-202ENST00000399022 ANGPTL7O43827 346 aa12.93□□□□□ -0.34
RPRD1A-202ENST00000399022 CD8AP01732 235 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 129.5 ms