RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 NBEAL2Q6ZNJ1 2754 aa12.92□□□□□ -0.34
VCX3A-201ENST00000381089 MEGF11A6BM72 1044 aa12.92□□□□□ -0.34
VCX3A-201ENST00000381089 ARRDC5A6NEK1 342 aa12.92□□□□□ -0.34
VCX3A-201ENST00000381089 FAM90A8PA6NJQ4 464 aa12.92□□□□□ -0.34
VCX3A-201ENST00000381089 SELENOFO60613 162 aa12.92□□□□□ -0.34
VCX3A-201ENST00000381089 MPIG6BO95866 241 aa12.92□□□□□ -0.34
VCX3A-201ENST00000381089 PF4V1P10720 104 aa12.92□□□□□ -0.34
VCX3A-201ENST00000381089 CCL3L1P16619 93 aa12.92□□□□□ -0.34
VCX3A-201ENST00000381089 VDAC2P45880 294 aaPredicted RBP12.92□□□□□ -0.34
VCX3A-201ENST00000381089 ZNF684Q5T5D7 378 aa12.92□□□□□ -0.34
VCX3A-201ENST00000381089 KCTD18Q6PI47 426 aaPredicted RBP12.92□□□□□ -0.34
VCX3A-201ENST00000381089 ZNF782Q6ZMW2 699 aaPredicted RBP12.92□□□□□ -0.34
VCX3A-201ENST00000381089 LHFPL4Q7Z7J7 247 aa12.92□□□□□ -0.34
VCX3A-201ENST00000381089 ZNF573Q86YE8 665 aa12.92□□□□□ -0.34
VCX3A-201ENST00000381089 ZDHHC13Q8IUH4 622 aa12.92□□□□□ -0.34
VCX3A-201ENST00000381089 CD177Q8N6Q3 437 aa12.92□□□□□ -0.34
VCX3A-201ENST00000381089 ZNF556Q9HAH1 456 aa12.92□□□□□ -0.34
VCX3A-201ENST00000381089 ENPP5Q9UJA9 477 aa12.92□□□□□ -0.34
VCX3A-201ENST00000381089 RRP15Q9Y3B9 282 aaKnown RBP12.92□□□□□ -0.34
VCX3A-201ENST00000381089 DNAH3Q8TD57 4116 aa12.92□□□□□ -0.34
VCX3A-201ENST00000381089 TMEM269A0A1B0GVZ9 245 aa12.91□□□□□ -0.34
VCX3A-201ENST00000381089 A6NDX4 124 aa12.91□□□□□ -0.34
VCX3A-201ENST00000381089 F2RL2O00254 374 aa12.91□□□□□ -0.34
VCX3A-201ENST00000381089 PRODHO43272 600 aa12.91□□□□□ -0.34
VCX3A-201ENST00000381089 NXPH2O95156 264 aa12.91□□□□□ -0.34
VCX3A-201ENST00000381089 OR12D2P58182 307 aa12.91□□□□□ -0.34
VCX3A-201ENST00000381089 RPS7P62081 194 aaKnown RBP12.91□□□□□ -0.34
VCX3A-201ENST00000381089 SSX2Q16385 188 aa12.91□□□□□ -0.34
VCX3A-201ENST00000381089 LCN1P1Q5VSP4 162 aa12.91□□□□□ -0.34
VCX3A-201ENST00000381089 PLBD1Q6P4A8 553 aa12.91□□□□□ -0.34
VCX3A-201ENST00000381089 CD300LDQ6UXZ3 194 aa12.91□□□□□ -0.34
VCX3A-201ENST00000381089 TMEM219Q86XT9 240 aa12.91□□□□□ -0.34
VCX3A-201ENST00000381089 C11orf42Q8N5U0 333 aa12.91□□□□□ -0.34
VCX3A-201ENST00000381089 IQCF1Q8N6M8 205 aa12.91□□□□□ -0.34
VCX3A-201ENST00000381089 NRBF2Q96F24 287 aa12.91□□□□□ -0.34
VCX3A-201ENST00000381089 OR5M11Q96RB7 305 aa12.91□□□□□ -0.34
VCX3A-201ENST00000381089 CIB1Q99828 191 aa12.91□□□□□ -0.34
VCX3A-201ENST00000381089 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.91□□□□□ -0.34
VCX3A-201ENST00000381089 PIGLQ9Y2B2 252 aa12.91□□□□□ -0.34
VCX3A-201ENST00000381089 KMT2CQ8NEZ4 4911 aaKnown RBP12.9□□□□□ -0.34
VCX3A-201ENST00000381089 J3QT63 122 aa12.9□□□□□ -0.34
VCX3A-201ENST00000381089 MITFO75030 526 aaPredicted RBP12.9□□□□□ -0.34
VCX3A-201ENST00000381089 NRASP01111 189 aa12.9□□□□□ -0.34
VCX3A-201ENST00000381089 RBP4P02753 201 aa12.9□□□□□ -0.34
VCX3A-201ENST00000381089 PF4P02776 101 aa12.9□□□□□ -0.34
VCX3A-201ENST00000381089 TK1P04183 234 aa12.9□□□□□ -0.34
VCX3A-201ENST00000381089 HMGN1P05114 100 aa12.9□□□□□ -0.34
VCX3A-201ENST00000381089 PGA5P0DJD9 388 aa12.9□□□□□ -0.34
VCX3A-201ENST00000381089 ANXA8P13928 327 aa12.9□□□□□ -0.34
VCX3A-201ENST00000381089 HAAOP46952 286 aa12.9□□□□□ -0.34
VCX3A-201ENST00000381089 RAB13P51153 203 aa12.9□□□□□ -0.34
VCX3A-201ENST00000381089 DAPP51397 102 aa12.9□□□□□ -0.34
VCX3A-201ENST00000381089 SLC35A2P78381 396 aa12.9□□□□□ -0.34
VCX3A-201ENST00000381089 ZNF273Q14593 569 aa12.9□□□□□ -0.34
VCX3A-201ENST00000381089 SLC35D3Q5M8T2 416 aa12.9□□□□□ -0.34
VCX3A-201ENST00000381089 FAHD1Q6P587 224 aa12.9□□□□□ -0.34
VCX3A-201ENST00000381089 DEGS2Q6QHC5 323 aa12.9□□□□□ -0.34
VCX3A-201ENST00000381089 WFDC9Q8NEX5 89 aa12.9□□□□□ -0.34
VCX3A-201ENST00000381089 WIPF2Q8TF74 440 aaPredicted RBP12.9□□□□□ -0.34
VCX3A-201ENST00000381089 TEX12Q9BXU0 123 aa12.9□□□□□ -0.34
VCX3A-201ENST00000381089 MROQ9BYG7 248 aa12.9□□□□□ -0.34
VCX3A-201ENST00000381089 WNT10AQ9GZT5 417 aa12.9□□□□□ -0.34
VCX3A-201ENST00000381089 GABARAPL1Q9H0R8 117 aa12.9□□□□□ -0.34
VCX3A-201ENST00000381089 OR14J1Q9UGF5 321 aa12.9□□□□□ -0.34
VCX3A-201ENST00000381089 ADARB2-AS1A8MUL3 147 aa12.89□□□□□ -0.35
VCX3A-201ENST00000381089 C17orf98A8MV24 154 aa12.89□□□□□ -0.35
VCX3A-201ENST00000381089 EI24O14681 340 aa12.89□□□□□ -0.35
VCX3A-201ENST00000381089 NOS1APO75052 506 aaPredicted RBP12.89□□□□□ -0.35
VCX3A-201ENST00000381089 PIPP12273 146 aaPredicted RBP12.89□□□□□ -0.35
VCX3A-201ENST00000381089 IGLL1P15814 213 aa12.89□□□□□ -0.35
VCX3A-201ENST00000381089 AZGP1P25311 298 aaKnown RBP12.89□□□□□ -0.35
VCX3A-201ENST00000381089 DYNLT3P51808 116 aa12.89□□□□□ -0.35
VCX3A-201ENST00000381089 DYNC1I2Q13409 638 aaKnown RBP12.89□□□□□ -0.35
VCX3A-201ENST00000381089 ZNF829Q3KNS6 432 aaPredicted RBP12.89□□□□□ -0.35
VCX3A-201ENST00000381089 CCBE1Q6UXH8 406 aaPredicted RBP12.89□□□□□ -0.35
VCX3A-201ENST00000381089 CBR4Q8N4T8 237 aa12.89□□□□□ -0.35
VCX3A-201ENST00000381089 ZNF488Q96MN9 340 aa12.89□□□□□ -0.35
VCX3A-201ENST00000381089 PBOV1Q9GZY1 135 aa12.89□□□□□ -0.35
VCX3A-201ENST00000381089 GPR84Q9NQS5 396 aa12.89□□□□□ -0.35
VCX3A-201ENST00000381089 PAPOLBQ9NRJ5 636 aaKnown RBP12.89□□□□□ -0.35
VCX3A-201ENST00000381089 KRT84Q9NSB2 600 aa12.89□□□□□ -0.35
VCX3A-201ENST00000381089 FAM206AQ9NX38 181 aa12.89□□□□□ -0.35
VCX3A-201ENST00000381089 NKX1-2Q9UD57 310 aaPredicted RBP12.89□□□□□ -0.35
VCX3A-201ENST00000381089 A0A1W2PRX2 142 aa12.88□□□□□ -0.35
VCX3A-201ENST00000381089 ODF3BA8MYP8 253 aa12.88□□□□□ -0.35
VCX3A-201ENST00000381089 DUS4LO95620 317 aaKnown RBP12.88□□□□□ -0.35
VCX3A-201ENST00000381089 CLIC3O95833 236 aa12.88□□□□□ -0.35
VCX3A-201ENST00000381089 ZNF728P0DKX0 622 aa12.88□□□□□ -0.35
VCX3A-201ENST00000381089 ALOX5APP20292 161 aa12.88□□□□□ -0.35
VCX3A-201ENST00000381089 CEBPDP49716 269 aaPredicted RBP12.88□□□□□ -0.35
VCX3A-201ENST00000381089 GINS1Q14691 196 aa12.88□□□□□ -0.35
VCX3A-201ENST00000381089 LRRC36Q1X8D7 754 aa12.88□□□□□ -0.35
VCX3A-201ENST00000381089 DMRTC1Q5HYR2 192 aa12.88□□□□□ -0.35
VCX3A-201ENST00000381089 ZNF626Q68DY1 528 aa12.88□□□□□ -0.35
VCX3A-201ENST00000381089 GDPD3Q7L5L3 318 aa12.88□□□□□ -0.35
VCX3A-201ENST00000381089 DYNAPQ8N1N2 210 aa12.88□□□□□ -0.35
VCX3A-201ENST00000381089 ASCC1Q8N9N2 400 aaKnown RBP12.88□□□□□ -0.35
VCX3A-201ENST00000381089 OR5AU1Q8NGC0 362 aa12.88□□□□□ -0.35
VCX3A-201ENST00000381089 OR11H6Q8NGC7 330 aa12.88□□□□□ -0.35
VCX3A-201ENST00000381089 OR51E1Q8TCB6 317 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms