RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 SF3B6Q9Y3B4 125 aaKnown RBP12.87□□□□□ -0.35
PDGFA-201ENST00000354513 ACOD1A6NK06 481 aa12.86□□□□□ -0.35
PDGFA-201ENST00000354513 RFPL4AA6NLU0 287 aa12.86□□□□□ -0.35
PDGFA-201ENST00000354513 RFPL4AL1F8VTS6 287 aa12.86□□□□□ -0.35
PDGFA-201ENST00000354513 HMGN1P05114 100 aa12.86□□□□□ -0.35
PDGFA-201ENST00000354513 ATP6V1B1P15313 513 aa12.86□□□□□ -0.35
PDGFA-201ENST00000354513 EPHA2P29317 976 aa12.86□□□□□ -0.35
PDGFA-201ENST00000354513 RPS7P62081 194 aaKnown RBP12.86□□□□□ -0.35
PDGFA-201ENST00000354513 BLMHQ13867 455 aa12.86□□□□□ -0.35
PDGFA-201ENST00000354513 PTGES3Q15185 160 aaKnown RBP12.86□□□□□ -0.35
PDGFA-201ENST00000354513 AANATQ16613 207 aa12.86□□□□□ -0.35
PDGFA-201ENST00000354513 ZBTB37Q5TC79 503 aa12.86□□□□□ -0.35
PDGFA-201ENST00000354513 BATF2Q8N1L9 274 aa12.86□□□□□ -0.35
PDGFA-201ENST00000354513 KLHDC1Q8N7A1 406 aa12.86□□□□□ -0.35
PDGFA-201ENST00000354513 HIST1H2AAQ96QV6 131 aa12.86□□□□□ -0.35
PDGFA-201ENST00000354513 MBOAT4Q96T53 435 aa12.86□□□□□ -0.35
PDGFA-201ENST00000354513 TEX12Q9BXU0 123 aa12.86□□□□□ -0.35
PDGFA-201ENST00000354513 RANBP3Q9H6Z4 567 aaPredicted RBP12.86□□□□□ -0.35
PDGFA-201ENST00000354513 HES4Q9HCC6 221 aa12.86□□□□□ -0.35
PDGFA-201ENST00000354513 PIGLQ9Y2B2 252 aa12.86□□□□□ -0.35
PDGFA-201ENST00000354513 A0A1B0GTI1 187 aa12.85□□□□□ -0.35
PDGFA-201ENST00000354513 ZAR1LA6NP61 321 aa12.85□□□□□ -0.35
PDGFA-201ENST00000354513 M0R129 80 aa12.85□□□□□ -0.35
PDGFA-201ENST00000354513 MAGEB4O15481 346 aaPredicted RBP12.85□□□□□ -0.35
PDGFA-201ENST00000354513 DHRS3O75911 302 aa12.85□□□□□ -0.35
PDGFA-201ENST00000354513 RIPPLY1Q0D2K3 151 aa12.85□□□□□ -0.35
PDGFA-201ENST00000354513 Q6ZSR3 168 aa12.85□□□□□ -0.35
PDGFA-201ENST00000354513 BCDIN3DQ7Z5W3 292 aaKnown RBP12.85□□□□□ -0.35
PDGFA-201ENST00000354513 LHFPL4Q7Z7J7 247 aa12.85□□□□□ -0.35
PDGFA-201ENST00000354513 ZNF679Q8IYX0 411 aa12.85□□□□□ -0.35
PDGFA-201ENST00000354513 ZNF671Q8TAW3 534 aa12.85□□□□□ -0.35
PDGFA-201ENST00000354513 RDH12Q96NR8 316 aa12.85□□□□□ -0.35
PDGFA-201ENST00000354513 NRIP2Q9BQI9 281 aa12.85□□□□□ -0.35
PDGFA-201ENST00000354513 ZNF702PQ9H963 129 aa12.85□□□□□ -0.35
PDGFA-201ENST00000354513 RASL12Q9NYN1 266 aa12.85□□□□□ -0.35
PDGFA-201ENST00000354513 V9GYS6 101 aa12.85□□□□□ -0.35
PDGFA-201ENST00000354513 PQLC2LA1A4F0 135 aa12.84□□□□□ -0.35
PDGFA-201ENST00000354513 FAM90A8PA6NJQ4 464 aa12.84□□□□□ -0.35
PDGFA-201ENST00000354513 J3QT63 122 aa12.84□□□□□ -0.35
PDGFA-201ENST00000354513 DLGAP1O14490 977 aa12.84□□□□□ -0.35
PDGFA-201ENST00000354513 PRKYO43930 277 aa12.84□□□□□ -0.35
PDGFA-201ENST00000354513 NOS1APO75052 506 aaPredicted RBP12.84□□□□□ -0.35
PDGFA-201ENST00000354513 OPN1MWP04001 364 aa12.84□□□□□ -0.35
PDGFA-201ENST00000354513 OPN1MW2P0DN77 364 aa12.84□□□□□ -0.35
PDGFA-201ENST00000354513 OPN1MW3P0DN78 364 aa12.84□□□□□ -0.35
PDGFA-201ENST00000354513 COX7A1P24310 79 aa12.84□□□□□ -0.35
PDGFA-201ENST00000354513 CAPZA1P52907 286 aa12.84□□□□□ -0.35
PDGFA-201ENST00000354513 RPL31P62899 125 aaKnown RBP12.84□□□□□ -0.35
PDGFA-201ENST00000354513 HABP2Q14520 560 aaPredicted RBP12.84□□□□□ -0.35
PDGFA-201ENST00000354513 SMIM21Q3B7S5 101 aa12.84□□□□□ -0.35
PDGFA-201ENST00000354513 SLX4IPQ5VYV7 408 aa12.84□□□□□ -0.35
PDGFA-201ENST00000354513 KCTD18Q6PI47 426 aaPredicted RBP12.84□□□□□ -0.35
PDGFA-201ENST00000354513 CCBE1Q6UXH8 406 aaPredicted RBP12.84□□□□□ -0.35
PDGFA-201ENST00000354513 PLEKHG7Q6ZR37 379 aa12.84□□□□□ -0.35
PDGFA-201ENST00000354513 TCF23Q7RTU1 214 aa12.84□□□□□ -0.35
PDGFA-201ENST00000354513 CALHM1Q8IU99 346 aa12.84□□□□□ -0.35
PDGFA-201ENST00000354513 ZNF561Q8N587 486 aa12.84□□□□□ -0.35
PDGFA-201ENST00000354513 OR4M1Q8NGD0 313 aa12.84□□□□□ -0.35
PDGFA-201ENST00000354513 OR4C13Q8NGP0 309 aa12.84□□□□□ -0.35
PDGFA-201ENST00000354513 WIPF2Q8TF74 440 aaPredicted RBP12.84□□□□□ -0.35
PDGFA-201ENST00000354513 GPR173Q9NS66 373 aa12.84□□□□□ -0.35
PDGFA-201ENST00000354513 SERTAD4Q9NUC0 356 aa12.84□□□□□ -0.35
PDGFA-201ENST00000354513 TVP23BQ9NYZ1 205 aa12.84□□□□□ -0.35
PDGFA-201ENST00000354513 ENPP5Q9UJA9 477 aa12.84□□□□□ -0.35
PDGFA-201ENST00000354513 ADARB2-AS1A8MUL3 147 aa12.83□□□□□ -0.36
PDGFA-201ENST00000354513 ODF3BA8MYP8 253 aa12.83□□□□□ -0.36
PDGFA-201ENST00000354513 ZNF254O75437 659 aa12.83□□□□□ -0.36
PDGFA-201ENST00000354513 NRASP01111 189 aa12.83□□□□□ -0.36
PDGFA-201ENST00000354513 PRB2P02812 416 aaPredicted RBP12.83□□□□□ -0.36
PDGFA-201ENST00000354513 MPZP25189 248 aa12.83□□□□□ -0.36
PDGFA-201ENST00000354513 PRDX2P32119 198 aa12.83□□□□□ -0.36
PDGFA-201ENST00000354513 VHLP40337 213 aa12.83□□□□□ -0.36
PDGFA-201ENST00000354513 HAAOP46952 286 aa12.83□□□□□ -0.36
PDGFA-201ENST00000354513 ERVK11-1P61568 191 aa12.83□□□□□ -0.36
PDGFA-201ENST00000354513 C12orf73Q69YU5 71 aa12.83□□□□□ -0.36
PDGFA-201ENST00000354513 ZNF782Q6ZMW2 699 aaPredicted RBP12.83□□□□□ -0.36
PDGFA-201ENST00000354513 Q6ZTK2 550 aa12.83□□□□□ -0.36
PDGFA-201ENST00000354513 COMMD2Q86X83 199 aa12.83□□□□□ -0.36
PDGFA-201ENST00000354513 LYG1Q8N1E2 194 aa12.83□□□□□ -0.36
PDGFA-201ENST00000354513 ZNF555Q8NEP9 628 aa12.83□□□□□ -0.36
PDGFA-201ENST00000354513 OR14K1Q8NGZ2 314 aa12.83□□□□□ -0.36
PDGFA-201ENST00000354513 CYGBQ8WWM9 190 aa12.83□□□□□ -0.36
PDGFA-201ENST00000354513 ITFG2Q969R8 447 aa12.83□□□□□ -0.36
PDGFA-201ENST00000354513 APOL4Q9BPW4 351 aa12.83□□□□□ -0.36
PDGFA-201ENST00000354513 MROQ9BYG7 248 aa12.83□□□□□ -0.36
PDGFA-201ENST00000354513 PRRG3Q9BZD7 231 aa12.83□□□□□ -0.36
PDGFA-201ENST00000354513 FAM118AQ9NWS6 357 aa12.83□□□□□ -0.36
PDGFA-201ENST00000354513 A6NIN4 97 aa12.82□□□□□ -0.36
PDGFA-201ENST00000354513 C17orf98A8MV24 154 aa12.82□□□□□ -0.36
PDGFA-201ENST00000354513 F8VVB4 439 aa12.82□□□□□ -0.36
PDGFA-201ENST00000354513 F8VWA3 439 aa12.82□□□□□ -0.36
PDGFA-201ENST00000354513 TK1P04183 234 aa12.82□□□□□ -0.36
PDGFA-201ENST00000354513 RIDAP52758 137 aaKnown RBP12.82□□□□□ -0.36
PDGFA-201ENST00000354513 AQP4P55087 323 aa12.82□□□□□ -0.36
PDGFA-201ENST00000354513 EFNB1P98172 346 aa12.82□□□□□ -0.36
PDGFA-201ENST00000354513 SNAPC1Q16533 368 aa12.82□□□□□ -0.36
PDGFA-201ENST00000354513 ZNF829Q3KNS6 432 aaPredicted RBP12.82□□□□□ -0.36
PDGFA-201ENST00000354513 ZNF684Q5T5D7 378 aa12.82□□□□□ -0.36
PDGFA-201ENST00000354513 C11orf88Q6PI97 169 aa12.82□□□□□ -0.36
PDGFA-201ENST00000354513 IZUMO2Q6UXV1 221 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms