RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 TAS2R46P59540 309 aa8.24□□□□□ -1.09
TRIM55-201ENST00000276573 FOXF2Q12947 444 aa8.24□□□□□ -1.09
TRIM55-201ENST00000276573 MRPL49Q13405 166 aaKnown RBP8.24□□□□□ -1.09
TRIM55-201ENST00000276573 NDUFA5Q16718 116 aa8.24□□□□□ -1.09
TRIM55-201ENST00000276573 PIGYQ3MUY2 71 aa8.24□□□□□ -1.09
TRIM55-201ENST00000276573 PLEKHN1Q494U1 663 aaPredicted RBP8.24□□□□□ -1.09
TRIM55-201ENST00000276573 RFPL4BQ6ZWI9 263 aa8.24□□□□□ -1.09
TRIM55-201ENST00000276573 LYG2Q86SG7 212 aa8.24□□□□□ -1.09
TRIM55-201ENST00000276573 TMEM200AQ86VY9 491 aa8.24□□□□□ -1.09
TRIM55-201ENST00000276573 LHFPL1Q86WI0 220 aa8.24□□□□□ -1.09
TRIM55-201ENST00000276573 TMEM17Q86X19 198 aa8.24□□□□□ -1.09
TRIM55-201ENST00000276573 FTMTQ8N4E7 242 aa8.24□□□□□ -1.09
TRIM55-201ENST00000276573 ADAD2Q8NCV1 583 aaKnown RBP8.24□□□□□ -1.09
TRIM55-201ENST00000276573 OR10AD1Q8NGE0 317 aa8.24□□□□□ -1.09
TRIM55-201ENST00000276573 GRPEL2Q8TAA5 225 aa8.24□□□□□ -1.09
TRIM55-201ENST00000276573 OR5P3Q8WZ94 311 aa8.24□□□□□ -1.09
TRIM55-201ENST00000276573 SULT4A1Q9BR01 284 aa8.24□□□□□ -1.09
TRIM55-201ENST00000276573 OR51B6Q9H340 312 aa8.24□□□□□ -1.09
TRIM55-201ENST00000276573 SSUH2Q9Y2M2 353 aa8.24□□□□□ -1.09
TRIM55-201ENST00000276573 MPC1Q9Y5U8 109 aa8.24□□□□□ -1.09
TRIM55-201ENST00000276573 IGKV1D-8A0A087WSZ0 117 aa8.23□□□□□ -1.09
TRIM55-201ENST00000276573 C9orf170A2RU37 121 aa8.23□□□□□ -1.09
TRIM55-201ENST00000276573 ANKRD30BLA7E2S9 258 aa8.23□□□□□ -1.09
TRIM55-201ENST00000276573 SDCBPO00560 298 aaPredicted RBP8.23□□□□□ -1.09
TRIM55-201ENST00000276573 RRP8O43159 456 aaKnown RBP8.23□□□□□ -1.09
TRIM55-201ENST00000276573 LILRA1O75019 489 aa8.23□□□□□ -1.09
TRIM55-201ENST00000276573 CBR1P16152 277 aa8.23□□□□□ -1.09
TRIM55-201ENST00000276573 COX5AP20674 150 aa8.23□□□□□ -1.09
TRIM55-201ENST00000276573 HAAOP46952 286 aa8.23□□□□□ -1.09
TRIM55-201ENST00000276573 IDH3GP51553 393 aaPredicted RBP8.23□□□□□ -1.09
TRIM55-201ENST00000276573 RBM11P57052 281 aaKnown RBP8.23□□□□□ -1.09
TRIM55-201ENST00000276573 PPP1R1AQ13522 171 aa8.23□□□□□ -1.09
TRIM55-201ENST00000276573 TSC22D1Q15714 1073 aa8.23□□□□□ -1.09
TRIM55-201ENST00000276573 GRK1Q15835 563 aa8.23□□□□□ -1.09
TRIM55-201ENST00000276573 CHRFAM7AQ494W8 412 aa8.23□□□□□ -1.09
TRIM55-201ENST00000276573 DCAF12L2Q5VW00 463 aa8.23□□□□□ -1.09
TRIM55-201ENST00000276573 ELP2Q6IA86 826 aa8.23□□□□□ -1.09
TRIM55-201ENST00000276573 OR2T2Q6IF00 324 aa8.23□□□□□ -1.09
TRIM55-201ENST00000276573 FBXW12Q6X9E4 464 aa8.23□□□□□ -1.09
TRIM55-201ENST00000276573 OVCH2Q7RTZ1 564 aa8.23□□□□□ -1.09
TRIM55-201ENST00000276573 MYPOPQ86VE0 399 aaPredicted RBP8.23□□□□□ -1.09
TRIM55-201ENST00000276573 MKXQ8IYA7 352 aa8.23□□□□□ -1.09
TRIM55-201ENST00000276573 SLC7A5P1Q8MH63 180 aa8.23□□□□□ -1.09
TRIM55-201ENST00000276573 ZNF610Q8N9Z0 462 aa8.23□□□□□ -1.09
TRIM55-201ENST00000276573 WDR31Q8NA23 367 aa8.23□□□□□ -1.09
TRIM55-201ENST00000276573 OR13G1Q8NGZ3 307 aa8.23□□□□□ -1.09
TRIM55-201ENST00000276573 STARD4Q96DR4 205 aa8.23□□□□□ -1.09
TRIM55-201ENST00000276573 CMSS1Q9BQ75 279 aaKnown RBP8.23□□□□□ -1.09
TRIM55-201ENST00000276573 HDHD3Q9BSH5 251 aaPredicted RBP8.23□□□□□ -1.09
TRIM55-201ENST00000276573 PPA2Q9H2U2 334 aa8.23□□□□□ -1.09
TRIM55-201ENST00000276573 CDH20Q9HBT6 801 aa8.23□□□□□ -1.09
TRIM55-201ENST00000276573 ZNF701Q9NV72 531 aaPredicted RBP8.23□□□□□ -1.09
TRIM55-201ENST00000276573 OPN4Q9UHM6 478 aa8.23□□□□□ -1.09
TRIM55-201ENST00000276573 EDARQ9UNE0 448 aa8.23□□□□□ -1.09
TRIM55-201ENST00000276573 OSGIN2Q9Y236 505 aa8.23□□□□□ -1.09
TRIM55-201ENST00000276573 MBD3L4A6NDZ8 208 aaPredicted RBP8.22□□□□□ -1.09
TRIM55-201ENST00000276573 MBD3L3A6NE82 208 aaPredicted RBP8.22□□□□□ -1.09
TRIM55-201ENST00000276573 MBD3L5A6NJ08 208 aaPredicted RBP8.22□□□□□ -1.09
TRIM55-201ENST00000276573 PRSS44E7EML9 344 aa8.22□□□□□ -1.09
TRIM55-201ENST00000276573 F5H5P2 479 aa8.22□□□□□ -1.09
TRIM55-201ENST00000276573 MSTNO14793 375 aa8.22□□□□□ -1.09
TRIM55-201ENST00000276573 PDCD6O75340 191 aa8.22□□□□□ -1.09
TRIM55-201ENST00000276573 TNFSF13O75888 250 aa8.22□□□□□ -1.09
TRIM55-201ENST00000276573 CGAP01215 116 aa8.22□□□□□ -1.09
TRIM55-201ENST00000276573 ZNF35P13682 527 aa8.22□□□□□ -1.09
TRIM55-201ENST00000276573 SPINK2P20155 84 aa8.22□□□□□ -1.09
TRIM55-201ENST00000276573 BCL3P20749 454 aa8.22□□□□□ -1.09
TRIM55-201ENST00000276573 FUT3P21217 361 aa8.22□□□□□ -1.09
TRIM55-201ENST00000276573 DTYMKP23919 212 aa8.22□□□□□ -1.09
TRIM55-201ENST00000276573 CD34P28906 385 aa8.22□□□□□ -1.09
TRIM55-201ENST00000276573 PMELP40967 661 aa8.22□□□□□ -1.09
TRIM55-201ENST00000276573 DHODHQ02127 395 aa8.22□□□□□ -1.09
TRIM55-201ENST00000276573 FOXC1Q12948 553 aa8.22□□□□□ -1.09
TRIM55-201ENST00000276573 PDCD1Q15116 288 aa8.22□□□□□ -1.09
TRIM55-201ENST00000276573 BRICD5Q6PL45 260 aa8.22□□□□□ -1.09
TRIM55-201ENST00000276573 SEM1Q6ZVN7 128 aa8.22□□□□□ -1.09
TRIM55-201ENST00000276573 BHLHE23Q8NDY6 225 aa8.22□□□□□ -1.09
TRIM55-201ENST00000276573 C1orf162Q8NEQ5 155 aaPredicted RBP8.22□□□□□ -1.09
TRIM55-201ENST00000276573 TMEM185AQ8NFB2 350 aa8.22□□□□□ -1.09
TRIM55-201ENST00000276573 MBD3L2Q8NHZ7 208 aaPredicted RBP8.22□□□□□ -1.09
TRIM55-201ENST00000276573 ASB13Q8WXK3 278 aa8.22□□□□□ -1.09
TRIM55-201ENST00000276573 SLAMF9Q96A28 289 aa8.22□□□□□ -1.09
TRIM55-201ENST00000276573 SCGB3A2Q96PL1 93 aa8.22□□□□□ -1.09
TRIM55-201ENST00000276573 TMPRSS13Q9BYE2 586 aa8.22□□□□□ -1.09
TRIM55-201ENST00000276573 EHFQ9NZC4 300 aa8.22□□□□□ -1.09
TRIM55-201ENST00000276573 MTCH1Q9NZJ7 389 aa8.22□□□□□ -1.09
TRIM55-201ENST00000276573 LHX6Q9UPM6 363 aa8.22□□□□□ -1.09
TRIM55-201ENST00000276573 RIF1Q5UIP0 2472 aaKnown RBP8.22□□□□□ -1.09
TRIM55-201ENST00000276573 PLSCR5A0PG75 271 aa8.22□□□□□ -1.09
TRIM55-201ENST00000276573 FAM90A10PA6NDY2 464 aa8.22□□□□□ -1.09
TRIM55-201ENST00000276573 FAM90A18PA6NE21 464 aa8.22□□□□□ -1.09
TRIM55-201ENST00000276573 FAM90A16PA6NEW6 464 aa8.22□□□□□ -1.09
TRIM55-201ENST00000276573 FAM90A20PA6NIJ5 464 aa8.22□□□□□ -1.09
TRIM55-201ENST00000276573 FAM90A8PA6NJQ4 464 aa8.22□□□□□ -1.09
TRIM55-201ENST00000276573 FAM90A7PA6NKC0 464 aa8.22□□□□□ -1.09
TRIM55-201ENST00000276573 FAM90A22PA8MWA6 464 aa8.22□□□□□ -1.09
TRIM55-201ENST00000276573 FAM90A12PA8MX19 464 aa8.22□□□□□ -1.09
TRIM55-201ENST00000276573 FAM90A5PA8MXJ8 464 aa8.22□□□□□ -1.09
TRIM55-201ENST00000276573 FAM90A23PA8MXZ1 464 aa8.22□□□□□ -1.09
TRIM55-201ENST00000276573 SMPD2O60906 423 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms