RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 S100A16Q96FQ6 103 aaKnown RBP7.83□□□□□ -1.16
COMMD3-215ENST00000602574 OR10C1Q96KK4 312 aa7.83□□□□□ -1.16
COMMD3-215ENST00000602574 RSG1Q9BU20 258 aa7.83□□□□□ -1.16
COMMD3-215ENST00000602574 TRIM36Q9NQ86 728 aa7.83□□□□□ -1.16
COMMD3-215ENST00000602574 HCFC1R1Q9NWW0 138 aa7.83□□□□□ -1.16
COMMD3-215ENST00000602574 SERTAD3Q9UJW9 196 aa7.83□□□□□ -1.16
COMMD3-215ENST00000602574 TRAPPC2LQ9UL33 140 aa7.83□□□□□ -1.16
COMMD3-215ENST00000602574 NOP16Q9Y3C1 178 aaKnown RBP7.83□□□□□ -1.16
COMMD3-215ENST00000602574 A0A0J9YY10 115 aa7.82□□□□□ -1.16
COMMD3-215ENST00000602574 A0A1B0GX78 115 aa7.82□□□□□ -1.16
COMMD3-215ENST00000602574 TMEM189A5PLL7 270 aa7.82□□□□□ -1.16
COMMD3-215ENST00000602574 MAP1LC3B2A6NCE7 125 aa7.82□□□□□ -1.16
COMMD3-215ENST00000602574 SLC38A8A6NNN8 435 aa7.82□□□□□ -1.16
COMMD3-215ENST00000602574 GPR39O43194 453 aa7.82□□□□□ -1.16
COMMD3-215ENST00000602574 SRP19P09132 144 aaKnown RBP7.82□□□□□ -1.16
COMMD3-215ENST00000602574 DUSP3P51452 185 aaPredicted RBP7.82□□□□□ -1.16
COMMD3-215ENST00000602574 SUMO1P63165 101 aaKnown RBP7.82□□□□□ -1.16
COMMD3-215ENST00000602574 TMEM267Q0VDI3 215 aaPredicted RBP7.82□□□□□ -1.16
COMMD3-215ENST00000602574 INSL4Q14641 139 aa7.82□□□□□ -1.16
COMMD3-215ENST00000602574 ANKRD55Q3KP44 614 aa7.82□□□□□ -1.16
COMMD3-215ENST00000602574 ALKBH6Q3KRA9 238 aa7.82□□□□□ -1.16
COMMD3-215ENST00000602574 SLC25A52Q3SY17 297 aa7.82□□□□□ -1.16
COMMD3-215ENST00000602574 LRRC37A5PQ49AS3 106 aa7.82□□□□□ -1.16
COMMD3-215ENST00000602574 TP53I3Q53FA7 332 aa7.82□□□□□ -1.16
COMMD3-215ENST00000602574 LRRC73Q5JTD7 316 aa7.82□□□□□ -1.16
COMMD3-215ENST00000602574 C9orf50Q5SZB4 431 aa7.82□□□□□ -1.16
COMMD3-215ENST00000602574 WBP2NLQ6ICG8 309 aa7.82□□□□□ -1.16
COMMD3-215ENST00000602574 ZNF280BQ86YH2 543 aa7.82□□□□□ -1.16
COMMD3-215ENST00000602574 GPSM1Q86YR5 675 aa7.82□□□□□ -1.16
COMMD3-215ENST00000602574 LINC00471Q8N535 108 aa7.82□□□□□ -1.16
COMMD3-215ENST00000602574 OR2T33Q8NG76 320 aa7.82□□□□□ -1.16
COMMD3-215ENST00000602574 WBP2Q969T9 261 aa7.82□□□□□ -1.16
COMMD3-215ENST00000602574 DDIT4LQ96D03 193 aa7.82□□□□□ -1.16
COMMD3-215ENST00000602574 ZNF681Q96N22 645 aa7.82□□□□□ -1.16
COMMD3-215ENST00000602574 LRRC3BQ96PB8 259 aa7.82□□□□□ -1.16
COMMD3-215ENST00000602574 TSSK3Q96PN8 268 aa7.82□□□□□ -1.16
COMMD3-215ENST00000602574 CABLES2Q9BTV7 478 aa7.82□□□□□ -1.16
COMMD3-215ENST00000602574 MAP1LC3BQ9GZQ8 125 aa7.82□□□□□ -1.16
COMMD3-215ENST00000602574 TMEM39BQ9GZU3 492 aa7.82□□□□□ -1.16
COMMD3-215ENST00000602574 GTSF1LQ9H1H1 148 aa7.82□□□□□ -1.16
COMMD3-215ENST00000602574 ERG28Q9UKR5 140 aa7.82□□□□□ -1.16
COMMD3-215ENST00000602574 A0A1B0GTL3 188 aa7.82□□□□□ -1.16
COMMD3-215ENST00000602574 OR4C45A6NMZ5 311 aa7.82□□□□□ -1.16
COMMD3-215ENST00000602574 CGAP01215 116 aa7.82□□□□□ -1.16
COMMD3-215ENST00000602574 HBZP02008 142 aa7.82□□□□□ -1.16
COMMD3-215ENST00000602574 TAL1P17542 331 aaPredicted RBP7.82□□□□□ -1.16
COMMD3-215ENST00000602574 THBS3P49746 956 aa7.82□□□□□ -1.16
COMMD3-215ENST00000602574 SUMO3P55854 103 aaPredicted RBP7.82□□□□□ -1.16
COMMD3-215ENST00000602574 ZNF92Q03936 586 aa7.82□□□□□ -1.16
COMMD3-215ENST00000602574 ZFP36L1Q07352 338 aaKnown RBP7.82□□□□□ -1.16
COMMD3-215ENST00000602574 PLCXD2Q0VAA5 305 aa7.82□□□□□ -1.16
COMMD3-215ENST00000602574 SPATA45Q537H7 98 aa7.82□□□□□ -1.16
COMMD3-215ENST00000602574 CISD2Q8N5K1 135 aaKnown RBP7.82□□□□□ -1.16
COMMD3-215ENST00000602574 STAG3L4Q8TBR4 150 aa7.82□□□□□ -1.16
COMMD3-215ENST00000602574 ACER1Q8TDN7 264 aa7.82□□□□□ -1.16
COMMD3-215ENST00000602574 DOK4Q8TEW6 326 aa7.82□□□□□ -1.16
COMMD3-215ENST00000602574 ZNF418Q8TF45 676 aaPredicted RBP7.82□□□□□ -1.16
COMMD3-215ENST00000602574 PLD4Q96BZ4 506 aa7.82□□□□□ -1.16
COMMD3-215ENST00000602574 ABHD6Q9BV23 337 aa7.82□□□□□ -1.16
COMMD3-215ENST00000602574 SLC25A51Q9H1U9 297 aa7.82□□□□□ -1.16
COMMD3-215ENST00000602574 ZNF703Q9H7S9 590 aaPredicted RBP7.82□□□□□ -1.16
COMMD3-215ENST00000602574 PLA2G2EQ9NZK7 142 aa7.82□□□□□ -1.16
COMMD3-215ENST00000602574 ZNF581Q9P0T4 197 aa7.82□□□□□ -1.16
COMMD3-215ENST00000602574 FBXW2Q9UKT8 454 aa7.82□□□□□ -1.16
COMMD3-215ENST00000602574 WDR45Q9Y484 360 aa7.82□□□□□ -1.16
COMMD3-215ENST00000602574 TRAV38-1A0A0B4J264 116 aa7.81□□□□□ -1.16
COMMD3-215ENST00000602574 A0A0G2JMM0 328 aa7.81□□□□□ -1.16
COMMD3-215ENST00000602574 A0A1W2PPB8 328 aa7.81□□□□□ -1.16
COMMD3-215ENST00000602574 KIR3DP1A8MWS1 328 aa7.81□□□□□ -1.16
COMMD3-215ENST00000602574 LATO43561 262 aa7.81□□□□□ -1.16
COMMD3-215ENST00000602574 SCGB2A1O75556 95 aa7.81□□□□□ -1.16
COMMD3-215ENST00000602574 CD1AP06126 327 aa7.81□□□□□ -1.16
COMMD3-215ENST00000602574 HTR1FP30939 366 aa7.81□□□□□ -1.16
COMMD3-215ENST00000602574 TNFSF9P41273 254 aa7.81□□□□□ -1.16
COMMD3-215ENST00000602574 NPBWR2P48146 333 aa7.81□□□□□ -1.16
COMMD3-215ENST00000602574 IAH1Q2TAA2 248 aaPredicted RBP7.81□□□□□ -1.16
COMMD3-215ENST00000602574 DUSP28Q4G0W2 176 aa7.81□□□□□ -1.16
COMMD3-215ENST00000602574 ALG10Q5BKT4 473 aa7.81□□□□□ -1.16
COMMD3-215ENST00000602574 CEACAM19Q7Z692 300 aa7.81□□□□□ -1.16
COMMD3-215ENST00000602574 RTN4RL1Q86UN2 441 aaPredicted RBP7.81□□□□□ -1.16
COMMD3-215ENST00000602574 SAXO1Q8IYX7 474 aa7.81□□□□□ -1.16
COMMD3-215ENST00000602574 OR52R1Q8NGF1 315 aa7.81□□□□□ -1.16
COMMD3-215ENST00000602574 VN1R17PQ8TDU5 208 aa7.81□□□□□ -1.16
COMMD3-215ENST00000602574 AQP3Q92482 292 aa7.81□□□□□ -1.16
COMMD3-215ENST00000602574 ZMYND19Q96E35 227 aaPredicted RBP7.81□□□□□ -1.16
COMMD3-215ENST00000602574 GPR21Q99679 349 aa7.81□□□□□ -1.16
COMMD3-215ENST00000602574 FLRT3Q9NZU0 649 aa7.81□□□□□ -1.16
COMMD3-215ENST00000602574 GALPQ9UBC7 116 aa7.81□□□□□ -1.16
COMMD3-215ENST00000602574 CCNL1Q9UK58 526 aaPredicted RBP7.81□□□□□ -1.16
COMMD3-215ENST00000602574 UFC1Q9Y3C8 167 aa7.81□□□□□ -1.16
COMMD3-215ENST00000602574 IGKV6-21A0A0C4DH24 114 aa7.81□□□□□ -1.16
COMMD3-215ENST00000602574 KLF8O95600 359 aaPredicted RBP7.81□□□□□ -1.16
COMMD3-215ENST00000602574 PFN1P07737 140 aaKnown RBP7.81□□□□□ -1.16
COMMD3-215ENST00000602574 FTH1P19P0C7X4 201 aa7.81□□□□□ -1.16
COMMD3-215ENST00000602574 PBX2P40425 430 aa7.81□□□□□ -1.16
COMMD3-215ENST00000602574 HINT1P49773 126 aaPredicted RBP7.81□□□□□ -1.16
COMMD3-215ENST00000602574 TAS2R20P59543 309 aa7.81□□□□□ -1.16
COMMD3-215ENST00000602574 ADAM8P78325 824 aa7.81□□□□□ -1.16
COMMD3-215ENST00000602574 PCBP2Q15366 365 aaKnown RBP eCLIP7.81□□□□□ -1.16
COMMD3-215ENST00000602574 TMEM207Q6UWW9 146 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms