RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 TMEM163Q8TC26 289 aa11.11□□□□□ -0.63
SHKBP1-208ENST00000595726 REEP6Q96HR9 211 aa11.11□□□□□ -0.63
SHKBP1-208ENST00000595726 RCC1LQ96I51 464 aaKnown RBP11.11□□□□□ -0.63
SHKBP1-208ENST00000595726 CDCA4Q9BXL8 241 aa11.11□□□□□ -0.63
SHKBP1-208ENST00000595726 YIPF3Q9GZM5 350 aa11.11□□□□□ -0.63
SHKBP1-208ENST00000595726 MEGF9Q9H1U4 602 aa11.11□□□□□ -0.63
SHKBP1-208ENST00000595726 SP140LQ9H930 580 aa11.11□□□□□ -0.63
SHKBP1-208ENST00000595726 BRD7Q9NPI1 651 aa11.11□□□□□ -0.63
SHKBP1-208ENST00000595726 INPP5EQ9NRR6 644 aa11.11□□□□□ -0.63
SHKBP1-208ENST00000595726 ENOPH1Q9UHY7 261 aa11.11□□□□□ -0.63
SHKBP1-208ENST00000595726 LAMP5Q9UJQ1 280 aa11.11□□□□□ -0.63
SHKBP1-208ENST00000595726 LRP12Q9Y561 859 aa11.11□□□□□ -0.63
SHKBP1-208ENST00000595726 SAC3D1A6NKF1 404 aa11.1□□□□□ -0.63
SHKBP1-208ENST00000595726 H3BNX3 289 aa11.1□□□□□ -0.63
SHKBP1-208ENST00000595726 PF4P02776 101 aa11.1□□□□□ -0.63
SHKBP1-208ENST00000595726 NHLRC4P0CG21 123 aaPredicted RBP11.1□□□□□ -0.63
SHKBP1-208ENST00000595726 DDOSTP39656 456 aa11.1□□□□□ -0.63
SHKBP1-208ENST00000595726 HCCSP53701 268 aa11.1□□□□□ -0.63
SHKBP1-208ENST00000595726 PSMA6P60900 246 aaKnown RBP11.1□□□□□ -0.63
SHKBP1-208ENST00000595726 GFOD2Q3B7J2 385 aa11.1□□□□□ -0.63
SHKBP1-208ENST00000595726 TMEM95Q3KNT9 176 aa11.1□□□□□ -0.63
SHKBP1-208ENST00000595726 NKAPLQ5M9Q1 402 aa11.1□□□□□ -0.63
SHKBP1-208ENST00000595726 AADACL4Q5VUY2 407 aa11.1□□□□□ -0.63
SHKBP1-208ENST00000595726 NXNL2Q5VZ03 156 aa11.1□□□□□ -0.63
SHKBP1-208ENST00000595726 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.1□□□□□ -0.63
SHKBP1-208ENST00000595726 Q8N2B8 174 aa11.1□□□□□ -0.63
SHKBP1-208ENST00000595726 SGK3Q96BR1 496 aa11.1□□□□□ -0.63
SHKBP1-208ENST00000595726 PGAM5Q96HS1 289 aa11.1□□□□□ -0.63
SHKBP1-208ENST00000595726 OSBPL10Q9BXB5 764 aa11.1□□□□□ -0.63
SHKBP1-208ENST00000595726 GABARAPL3Q9BY60 117 aa11.1□□□□□ -0.63
SHKBP1-208ENST00000595726 OR10A2Q9H208 303 aa11.1□□□□□ -0.63
SHKBP1-208ENST00000595726 COPS3Q9UNS2 423 aa11.1□□□□□ -0.63
SHKBP1-208ENST00000595726 PRR32B1ATL7 298 aa11.09□□□□□ -0.63
SHKBP1-208ENST00000595726 NDUFB3O43676 98 aa11.09□□□□□ -0.63
SHKBP1-208ENST00000595726 PEX14O75381 377 aa11.09□□□□□ -0.63
SHKBP1-208ENST00000595726 CCDC159P0C7I6 412 aa11.09□□□□□ -0.63
SHKBP1-208ENST00000595726 FAHP16930 419 aa11.09□□□□□ -0.63
SHKBP1-208ENST00000595726 CFL1P23528 166 aaKnown RBP11.09□□□□□ -0.63
SHKBP1-208ENST00000595726 POLR2IP36954 125 aaKnown RBP11.09□□□□□ -0.63
SHKBP1-208ENST00000595726 CD83Q01151 205 aa11.09□□□□□ -0.63
SHKBP1-208ENST00000595726 MICBQ29980 383 aa11.09□□□□□ -0.63
SHKBP1-208ENST00000595726 PLA1AQ53H76 456 aa11.09□□□□□ -0.63
SHKBP1-208ENST00000595726 NCR3LG1Q68D85 454 aa11.09□□□□□ -0.63
SHKBP1-208ENST00000595726 MEPCEQ7L2J0 689 aaKnown RBP11.09□□□□□ -0.63
SHKBP1-208ENST00000595726 KRT77Q7Z794 578 aa11.09□□□□□ -0.63
SHKBP1-208ENST00000595726 TMEM219Q86XT9 240 aa11.09□□□□□ -0.63
SHKBP1-208ENST00000595726 C11orf53Q8IXP5 236 aa11.09□□□□□ -0.63
SHKBP1-208ENST00000595726 PLPP7Q8NBV4 271 aa11.09□□□□□ -0.63
SHKBP1-208ENST00000595726 CNN2Q99439 309 aaKnown RBP11.09□□□□□ -0.63
SHKBP1-208ENST00000595726 ASCL2Q99929 193 aa11.09□□□□□ -0.63
SHKBP1-208ENST00000595726 TTTY10Q9BZA0 68 aa11.09□□□□□ -0.63
SHKBP1-208ENST00000595726 RGCCQ9H4X1 137 aa11.09□□□□□ -0.63
SHKBP1-208ENST00000595726 METTL8Q9H825 291 aaKnown RBP11.09□□□□□ -0.63
SHKBP1-208ENST00000595726 NIPAL2Q9H841 368 aa11.09□□□□□ -0.63
SHKBP1-208ENST00000595726 SF3B6Q9Y3B4 125 aaKnown RBP11.09□□□□□ -0.63
SHKBP1-208ENST00000595726 TRBV23-1A0A0A0MS06 115 aa11.08□□□□□ -0.64
SHKBP1-208ENST00000595726 ANKRD30BLA7E2S9 258 aa11.08□□□□□ -0.64
SHKBP1-208ENST00000595726 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.08□□□□□ -0.64
SHKBP1-208ENST00000595726 PSMD9O00233 223 aa11.08□□□□□ -0.64
SHKBP1-208ENST00000595726 EBAG9O00559 213 aa11.08□□□□□ -0.64
SHKBP1-208ENST00000595726 ANGPTL7O43827 346 aa11.08□□□□□ -0.64
SHKBP1-208ENST00000595726 CHRM2P08172 466 aa11.08□□□□□ -0.64
SHKBP1-208ENST00000595726 TGM4P49221 684 aa11.08□□□□□ -0.64
SHKBP1-208ENST00000595726 GSK3AP49840 483 aa11.08□□□□□ -0.64
SHKBP1-208ENST00000595726 GMFBP60983 142 aa11.08□□□□□ -0.64
SHKBP1-208ENST00000595726 TCTEX1D4Q5JR98 221 aa11.08□□□□□ -0.64
SHKBP1-208ENST00000595726 ZFP1Q6P2D0 407 aa11.08□□□□□ -0.64
SHKBP1-208ENST00000595726 KCTD18Q6PI47 426 aaPredicted RBP11.08□□□□□ -0.64
SHKBP1-208ENST00000595726 DEGS2Q6QHC5 323 aa11.08□□□□□ -0.64
SHKBP1-208ENST00000595726 GID4Q8IVV7 300 aa11.08□□□□□ -0.64
SHKBP1-208ENST00000595726 DTX3Q8N9I9 347 aa11.08□□□□□ -0.64
SHKBP1-208ENST00000595726 OR5AU1Q8NGC0 362 aa11.08□□□□□ -0.64
SHKBP1-208ENST00000595726 OR8B12Q8NGG6 310 aa11.08□□□□□ -0.64
SHKBP1-208ENST00000595726 C8orf46Q8TAG6 207 aa11.08□□□□□ -0.64
SHKBP1-208ENST00000595726 MUC7Q8TAX7 377 aa11.08□□□□□ -0.64
SHKBP1-208ENST00000595726 LRRC29Q8WV35 223 aa11.08□□□□□ -0.64
SHKBP1-208ENST00000595726 LYZL4Q96KX0 146 aa11.08□□□□□ -0.64
SHKBP1-208ENST00000595726 OR8B4Q96RC9 309 aa11.08□□□□□ -0.64
SHKBP1-208ENST00000595726 IL4I1Q96RQ9 567 aa11.08□□□□□ -0.64
SHKBP1-208ENST00000595726 RIBC2Q9H4K1 309 aa11.08□□□□□ -0.64
SHKBP1-208ENST00000595726 ADGRL4Q9HBW9 690 aa11.08□□□□□ -0.64
SHKBP1-208ENST00000595726 FAM206AQ9NX38 181 aa11.08□□□□□ -0.64
SHKBP1-208ENST00000595726 TMEM14AQ9Y6G1 99 aa11.08□□□□□ -0.64
SHKBP1-208ENST00000595726 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.07□□□□□ -0.64
SHKBP1-208ENST00000595726 LCE6AA0A183 80 aa11.07□□□□□ -0.64
SHKBP1-208ENST00000595726 EI24O14681 340 aa11.07□□□□□ -0.64
SHKBP1-208ENST00000595726 ALPLP05186 524 aa11.07□□□□□ -0.64
SHKBP1-208ENST00000595726 ACKR3P25106 362 aa11.07□□□□□ -0.64
SHKBP1-208ENST00000595726 BLCAPP62952 87 aa11.07□□□□□ -0.64
SHKBP1-208ENST00000595726 ROM1Q03395 351 aa11.07□□□□□ -0.64
SHKBP1-208ENST00000595726 AANATQ16613 207 aa11.07□□□□□ -0.64
SHKBP1-208ENST00000595726 KLHL22Q53GT1 634 aa11.07□□□□□ -0.64
SHKBP1-208ENST00000595726 ARSJQ5FYB0 599 aaPredicted RBP11.07□□□□□ -0.64
SHKBP1-208ENST00000595726 SLC36A1Q7Z2H8 476 aa11.07□□□□□ -0.64
SHKBP1-208ENST00000595726 WDR86Q86TI4 376 aa11.07□□□□□ -0.64
SHKBP1-208ENST00000595726 SLC35F2Q8IXU6 374 aa11.07□□□□□ -0.64
SHKBP1-208ENST00000595726 ZNF679Q8IYX0 411 aa11.07□□□□□ -0.64
SHKBP1-208ENST00000595726 CSNK2A3Q8NEV1 391 aa11.07□□□□□ -0.64
SHKBP1-208ENST00000595726 ASB17Q8WXJ9 295 aa11.07□□□□□ -0.64
SHKBP1-208ENST00000595726 DMRTB1Q96MA1 342 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms