RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 MUC13Q9H3R2 512 aa9.54□□□□□ -0.88
BRCA1-225ENST00000586385 FAM206AQ9NX38 181 aa9.54□□□□□ -0.88
BRCA1-225ENST00000586385 RASL12Q9NYN1 266 aa9.54□□□□□ -0.88
BRCA1-225ENST00000586385 U3KQV3 271 aa9.54□□□□□ -0.88
BRCA1-225ENST00000586385 A0A0U1RQV5 110 aa9.53□□□□□ -0.88
BRCA1-225ENST00000586385 FAM90A22PA8MWA6 464 aa9.53□□□□□ -0.88
BRCA1-225ENST00000586385 NOS1APO75052 506 aaPredicted RBP9.53□□□□□ -0.88
BRCA1-225ENST00000586385 PIPP12273 146 aaPredicted RBP9.53□□□□□ -0.88
BRCA1-225ENST00000586385 FAHP16930 419 aa9.53□□□□□ -0.88
BRCA1-225ENST00000586385 CD33P20138 364 aa9.53□□□□□ -0.88
BRCA1-225ENST00000586385 MAP2K3P46734 347 aa9.53□□□□□ -0.88
BRCA1-225ENST00000586385 DYNLT3P51808 116 aa9.53□□□□□ -0.88
BRCA1-225ENST00000586385 LGALS4P56470 323 aa9.53□□□□□ -0.88
BRCA1-225ENST00000586385 SSX2Q16385 188 aa9.53□□□□□ -0.88
BRCA1-225ENST00000586385 PLBD1Q6P4A8 553 aa9.53□□□□□ -0.88
BRCA1-225ENST00000586385 MOB3CQ70IA8 216 aa9.53□□□□□ -0.88
BRCA1-225ENST00000586385 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.53□□□□□ -0.88
BRCA1-225ENST00000586385 ZNF561Q8N587 486 aa9.53□□□□□ -0.88
BRCA1-225ENST00000586385 ZNF454Q8N9F8 522 aa9.53□□□□□ -0.88
BRCA1-225ENST00000586385 DTX3Q8N9I9 347 aa9.53□□□□□ -0.88
BRCA1-225ENST00000586385 OR11H6Q8NGC7 330 aa9.53□□□□□ -0.88
BRCA1-225ENST00000586385 RPS4Y2Q8TD47 263 aa9.53□□□□□ -0.88
BRCA1-225ENST00000586385 OTULINQ96BN8 352 aa9.53□□□□□ -0.88
BRCA1-225ENST00000586385 HIST1H2AAQ96QV6 131 aa9.53□□□□□ -0.88
BRCA1-225ENST00000586385 TEAD3Q99594 435 aa9.53□□□□□ -0.88
BRCA1-225ENST00000586385 ELAC2Q9BQ52 826 aaKnown RBP9.53□□□□□ -0.88
BRCA1-225ENST00000586385 NIPAL2Q9H841 368 aa9.53□□□□□ -0.88
BRCA1-225ENST00000586385 HES4Q9HCC6 221 aa9.53□□□□□ -0.88
BRCA1-225ENST00000586385 OR5B21A6NL26 309 aa9.52□□□□□ -0.89
BRCA1-225ENST00000586385 PSMD9O00233 223 aa9.52□□□□□ -0.89
BRCA1-225ENST00000586385 ZNF737O75373 536 aa9.52□□□□□ -0.89
BRCA1-225ENST00000586385 TK1P04183 234 aa9.52□□□□□ -0.89
BRCA1-225ENST00000586385 ARG1P05089 322 aa9.52□□□□□ -0.89
BRCA1-225ENST00000586385 SLC2A5P22732 501 aa9.52□□□□□ -0.89
BRCA1-225ENST00000586385 ERVK11-1P61568 191 aa9.52□□□□□ -0.89
BRCA1-225ENST00000586385 MFGE8Q08431 387 aaPredicted RBP9.52□□□□□ -0.89
BRCA1-225ENST00000586385 SMIM21Q3B7S5 101 aa9.52□□□□□ -0.89
BRCA1-225ENST00000586385 TMEM42Q69YG0 159 aa9.52□□□□□ -0.89
BRCA1-225ENST00000586385 C10orf99Q6UWK7 81 aa9.52□□□□□ -0.89
BRCA1-225ENST00000586385 CALHM1Q8IU99 346 aa9.52□□□□□ -0.89
BRCA1-225ENST00000586385 OR5AU1Q8NGC0 362 aa9.52□□□□□ -0.89
BRCA1-225ENST00000586385 FAM81AQ8TBF8 368 aa9.52□□□□□ -0.89
BRCA1-225ENST00000586385 OR51E1Q8TCB6 317 aa9.52□□□□□ -0.89
BRCA1-225ENST00000586385 FOXRED1Q96CU9 486 aaPredicted RBP9.52□□□□□ -0.89
BRCA1-225ENST00000586385 MALSU1Q96EH3 234 aa9.52□□□□□ -0.89
BRCA1-225ENST00000586385 GPR84Q9NQS5 396 aa9.52□□□□□ -0.89
BRCA1-225ENST00000586385 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.52□□□□□ -0.89
BRCA1-225ENST00000586385 INPP5EQ9NRR6 644 aa9.52□□□□□ -0.89
BRCA1-225ENST00000586385 ARL8BQ9NVJ2 186 aa9.52□□□□□ -0.89
BRCA1-225ENST00000586385 SAMHD1Q9Y3Z3 626 aaKnown RBP9.52□□□□□ -0.89
BRCA1-225ENST00000586385 TBL2Q9Y4P3 447 aaKnown RBP9.52□□□□□ -0.89
BRCA1-225ENST00000586385 PQLC2LA1A4F0 135 aa9.51□□□□□ -0.89
BRCA1-225ENST00000586385 F8VVB4 439 aa9.51□□□□□ -0.89
BRCA1-225ENST00000586385 F8VWA3 439 aa9.51□□□□□ -0.89
BRCA1-225ENST00000586385 J3QT63 122 aa9.51□□□□□ -0.89
BRCA1-225ENST00000586385 K7N7A8 449 aa9.51□□□□□ -0.89
BRCA1-225ENST00000586385 SLC1A7O00341 560 aa9.51□□□□□ -0.89
BRCA1-225ENST00000586385 SRSF10O75494 262 aaKnown RBP9.51□□□□□ -0.89
BRCA1-225ENST00000586385 ZNF728P0DKX0 622 aa9.51□□□□□ -0.89
BRCA1-225ENST00000586385 IGHV1-8P0DP01 117 aa9.51□□□□□ -0.89
BRCA1-225ENST00000586385 MPZP25189 248 aa9.51□□□□□ -0.89
BRCA1-225ENST00000586385 VDAC2P45880 294 aaPredicted RBP9.51□□□□□ -0.89
BRCA1-225ENST00000586385 HAAOP46952 286 aa9.51□□□□□ -0.89
BRCA1-225ENST00000586385 EGFEM1PQ0D2K5 195 aa9.51□□□□□ -0.89
BRCA1-225ENST00000586385 PLCXD3Q63HM9 321 aa9.51□□□□□ -0.89
BRCA1-225ENST00000586385 OR2T5Q6IEZ7 315 aa9.51□□□□□ -0.89
BRCA1-225ENST00000586385 LCN8Q6JVE9 175 aa9.51□□□□□ -0.89
BRCA1-225ENST00000586385 TMEM179BQ7Z7N9 219 aa9.51□□□□□ -0.89
BRCA1-225ENST00000586385 DEFB107AQ8IZN7 70 aa9.51□□□□□ -0.89
BRCA1-225ENST00000586385 OR10G2Q8NGC3 310 aa9.51□□□□□ -0.89
BRCA1-225ENST00000586385 OR2T29Q8NH02 315 aa9.51□□□□□ -0.89
BRCA1-225ENST00000586385 TEX47Q8TBZ9 253 aa9.51□□□□□ -0.89
BRCA1-225ENST00000586385 FEVQ99581 238 aa9.51□□□□□ -0.89
BRCA1-225ENST00000586385 PBOV1Q9GZY1 135 aa9.51□□□□□ -0.89
BRCA1-225ENST00000586385 C1orf21Q9H246 121 aa9.51□□□□□ -0.89
BRCA1-225ENST00000586385 ARGLU1Q9NWB6 273 aaPredicted RBP9.51□□□□□ -0.89
BRCA1-225ENST00000586385 ACTR3BQ9P1U1 418 aa9.51□□□□□ -0.89
BRCA1-225ENST00000586385 PIGLQ9Y2B2 252 aa9.51□□□□□ -0.89
BRCA1-225ENST00000586385 HILPDAQ9Y5L2 63 aa9.51□□□□□ -0.89
BRCA1-225ENST00000586385 TMEM269A0A1B0GVZ9 245 aa9.5□□□□□ -0.89
BRCA1-225ENST00000586385 hCG_1809904A0A1W2PP81 198 aa9.5□□□□□ -0.89
BRCA1-225ENST00000586385 A0A1W2PPE2 198 aa9.5□□□□□ -0.89
BRCA1-225ENST00000586385 A0A1W2PPH5 198 aa9.5□□□□□ -0.89
BRCA1-225ENST00000586385 A0A1W2PR64 198 aa9.5□□□□□ -0.89
BRCA1-225ENST00000586385 A0A1W2PRV1 198 aa9.5□□□□□ -0.89
BRCA1-225ENST00000586385 ACOD1A6NK06 481 aa9.5□□□□□ -0.89
BRCA1-225ENST00000586385 PRR23D1E9PI22 279 aaPredicted RBP9.5□□□□□ -0.89
BRCA1-225ENST00000586385 NRASP01111 189 aa9.5□□□□□ -0.89
BRCA1-225ENST00000586385 RBP4P02753 201 aa9.5□□□□□ -0.89
BRCA1-225ENST00000586385 TTRP02766 147 aa9.5□□□□□ -0.89
BRCA1-225ENST00000586385 PRR23D2P0DMB1 279 aaPredicted RBP9.5□□□□□ -0.89
BRCA1-225ENST00000586385 ATP6V1B1P15313 513 aa9.5□□□□□ -0.89
BRCA1-225ENST00000586385 HOXD3P31249 432 aaPredicted RBP9.5□□□□□ -0.89
BRCA1-225ENST00000586385 RIPPLY1Q0D2K3 151 aa9.5□□□□□ -0.89
BRCA1-225ENST00000586385 CCDC121Q6ZUS5 278 aa9.5□□□□□ -0.89
BRCA1-225ENST00000586385 KRT77Q7Z794 578 aa9.5□□□□□ -0.89
BRCA1-225ENST00000586385 CPOQ8IVL8 374 aa9.5□□□□□ -0.89
BRCA1-225ENST00000586385 MYDGFQ969H8 173 aa9.5□□□□□ -0.89
BRCA1-225ENST00000586385 MAGIXQ9H6Y5 334 aa9.5□□□□□ -0.89
BRCA1-225ENST00000586385 ABCB10Q9NRK6 738 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms