RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 SNRNP25Q9BV90 132 aaKnown RBP2.47□□□□□ -2.01
TOPBP1-208ENST00000511439 GON7Q9BXV9 100 aa2.47□□□□□ -2.01
TOPBP1-208ENST00000511439 ZNF442Q9H7R0 627 aa2.47□□□□□ -2.01
TOPBP1-208ENST00000511439 OR5V1Q9UGF6 321 aa2.47□□□□□ -2.01
TOPBP1-208ENST00000511439 PDE10AQ9Y233 779 aa2.47□□□□□ -2.01
TOPBP1-208ENST00000511439 FLVCR1Q9Y5Y0 555 aa2.47□□□□□ -2.01
TOPBP1-208ENST00000511439 MAD1L1Q9Y6D9 718 aa2.47□□□□□ -2.01
TOPBP1-208ENST00000511439 FLG2Q5D862 2391 aaPredicted RBP2.47□□□□□ -2.01
TOPBP1-208ENST00000511439 DOCK11Q5JSL3 2073 aa2.46□□□□□ -2.01
TOPBP1-208ENST00000511439 SRRM2Q9UQ35 2752 aaKnown RBP2.46□□□□□ -2.02
TOPBP1-208ENST00000511439 SERTM2A0A1B0GWG4 89 aa2.46□□□□□ -2.02
TOPBP1-208ENST00000511439 NUPR2A6NF83 97 aa2.46□□□□□ -2.02
TOPBP1-208ENST00000511439 ERICH4A6NGS2 130 aa2.46□□□□□ -2.02
TOPBP1-208ENST00000511439 OR6C65A6NJZ3 312 aa2.46□□□□□ -2.02
TOPBP1-208ENST00000511439 C16orf90A8MZG2 172 aa2.46□□□□□ -2.02
TOPBP1-208ENST00000511439 B4DXG7 233 aa2.46□□□□□ -2.02
TOPBP1-208ENST00000511439 TRAPPC2LH3BP13 241 aa2.46□□□□□ -2.02
TOPBP1-208ENST00000511439 ZNF264O43296 627 aa2.46□□□□□ -2.02
TOPBP1-208ENST00000511439 SPOPO43791 374 aa2.46□□□□□ -2.02
TOPBP1-208ENST00000511439 EFNA2O43921 213 aa2.46□□□□□ -2.02
TOPBP1-208ENST00000511439 ICOSLGO75144 302 aa2.46□□□□□ -2.02
TOPBP1-208ENST00000511439 NIPSNAP2O75323 286 aa2.46□□□□□ -2.02
TOPBP1-208ENST00000511439 ZNF254O75437 659 aa2.46□□□□□ -2.02
TOPBP1-208ENST00000511439 UGT2B17O75795 530 aa2.46□□□□□ -2.02
TOPBP1-208ENST00000511439 C1orf105O95561 183 aa2.46□□□□□ -2.02
TOPBP1-208ENST00000511439 ETHE1O95571 254 aa2.46□□□□□ -2.02
TOPBP1-208ENST00000511439 IGKV3-11P04433 115 aa2.46□□□□□ -2.02
TOPBP1-208ENST00000511439 OR56A5P0C7T3 313 aa2.46□□□□□ -2.02
TOPBP1-208ENST00000511439 DUX4L4P0CJ87 422 aa2.46□□□□□ -2.02
TOPBP1-208ENST00000511439 ERGP11308 486 aa2.46□□□□□ -2.02
TOPBP1-208ENST00000511439 NPR2P20594 1047 aa2.46□□□□□ -2.02
TOPBP1-208ENST00000511439 ZBTB25P24278 435 aa2.46□□□□□ -2.02
TOPBP1-208ENST00000511439 KIR2DS4P43632 304 aa2.46□□□□□ -2.02
TOPBP1-208ENST00000511439 PLA2G16P53816 162 aa2.46□□□□□ -2.02
TOPBP1-208ENST00000511439 DSCR4P56555 118 aaPredicted RBP2.46□□□□□ -2.02
TOPBP1-208ENST00000511439 OGDHQ02218 1023 aa2.46□□□□□ -2.02
TOPBP1-208ENST00000511439 PJVKQ0ZLH3 352 aa2.46□□□□□ -2.02
TOPBP1-208ENST00000511439 ST3GAL3Q11203 375 aa2.46□□□□□ -2.02
TOPBP1-208ENST00000511439 IL18Q14116 193 aa2.46□□□□□ -2.02
TOPBP1-208ENST00000511439 EBPQ15125 230 aaKnown RBP2.46□□□□□ -2.02
TOPBP1-208ENST00000511439 TMED2Q15363 201 aa2.46□□□□□ -2.02
TOPBP1-208ENST00000511439 SYPL1Q16563 259 aa2.46□□□□□ -2.02
TOPBP1-208ENST00000511439 HADHQ16836 314 aaKnown RBP2.46□□□□□ -2.02
TOPBP1-208ENST00000511439 TTMPQ5BVD1 217 aa2.46□□□□□ -2.02
TOPBP1-208ENST00000511439 OR2B11Q5JQS5 317 aa2.46□□□□□ -2.02
TOPBP1-208ENST00000511439 SPANXN2Q5MJ10 180 aa2.46□□□□□ -2.02
TOPBP1-208ENST00000511439 CLEC6AQ6EIG7 209 aa2.46□□□□□ -2.02
TOPBP1-208ENST00000511439 OR5M10Q6IEU7 315 aa2.46□□□□□ -2.02
TOPBP1-208ENST00000511439 FAM71F2Q6NXP2 309 aa2.46□□□□□ -2.02
TOPBP1-208ENST00000511439 LRRN1Q6UXK5 716 aa2.46□□□□□ -2.02
TOPBP1-208ENST00000511439 APTXQ7Z2E3 356 aaKnown RBP2.46□□□□□ -2.02
TOPBP1-208ENST00000511439 GALNT10Q86SR1 603 aa2.46□□□□□ -2.02
TOPBP1-208ENST00000511439 PSTKQ8IV42 348 aaKnown RBP2.46□□□□□ -2.02
TOPBP1-208ENST00000511439 ZNF101Q8IZC7 436 aa2.46□□□□□ -2.02
TOPBP1-208ENST00000511439 DHRSXQ8N5I4 330 aa2.46□□□□□ -2.02
TOPBP1-208ENST00000511439 ZNF433Q8N7K0 673 aaPredicted RBP2.46□□□□□ -2.02
TOPBP1-208ENST00000511439 CEP112Q8N8E3 955 aa2.46□□□□□ -2.02
TOPBP1-208ENST00000511439 OR2T33Q8NG76 320 aa2.46□□□□□ -2.02
TOPBP1-208ENST00000511439 OR4F15Q8NGB8 312 aa2.46□□□□□ -2.02
TOPBP1-208ENST00000511439 OR5D13Q8NGL4 314 aa2.46□□□□□ -2.02
TOPBP1-208ENST00000511439 OR10D3Q8NH80 312 aa2.46□□□□□ -2.02
TOPBP1-208ENST00000511439 CNIH3Q8TBE1 160 aa2.46□□□□□ -2.02
TOPBP1-208ENST00000511439 SKA2Q8WVK7 121 aaPredicted RBP2.46□□□□□ -2.02
TOPBP1-208ENST00000511439 ANKRD49Q8WVL7 239 aa2.46□□□□□ -2.02
TOPBP1-208ENST00000511439 TRUB1Q8WWH5 349 aaKnown RBP2.46□□□□□ -2.02
TOPBP1-208ENST00000511439 RAPGEF5Q92565 580 aa2.46□□□□□ -2.02
TOPBP1-208ENST00000511439 RAB1CQ92928 201 aa2.46□□□□□ -2.02
TOPBP1-208ENST00000511439 MCUR1Q96AQ8 359 aa2.46□□□□□ -2.02
TOPBP1-208ENST00000511439 IMP4Q96G21 291 aaKnown RBP2.46□□□□□ -2.02
TOPBP1-208ENST00000511439 SH3YL1Q96HL8 342 aaPredicted RBP2.46□□□□□ -2.02
TOPBP1-208ENST00000511439 FOPNLQ96NB1 174 aa2.46□□□□□ -2.02
TOPBP1-208ENST00000511439 PRAP1Q96NZ9 151 aa2.46□□□□□ -2.02
TOPBP1-208ENST00000511439 CHP1Q99653 195 aa2.46□□□□□ -2.02
TOPBP1-208ENST00000511439 C1QTNF6Q9BXI9 259 aa2.46□□□□□ -2.02
TOPBP1-208ENST00000511439 PPA2Q9H2U2 334 aa2.46□□□□□ -2.02
TOPBP1-208ENST00000511439 PPDPFQ9H3Y8 114 aa2.46□□□□□ -2.02
TOPBP1-208ENST00000511439 FAM96AQ9H5X1 160 aa2.46□□□□□ -2.02
TOPBP1-208ENST00000511439 RANBP3Q9H6Z4 567 aaPredicted RBP2.46□□□□□ -2.02
TOPBP1-208ENST00000511439 CAB39LQ9H9S4 337 aa2.46□□□□□ -2.02
TOPBP1-208ENST00000511439 RPRD1BQ9NQG5 326 aaKnown RBP2.46□□□□□ -2.02
TOPBP1-208ENST00000511439 NUDT15Q9NV35 164 aa2.46□□□□□ -2.02
TOPBP1-208ENST00000511439 UBAP1Q9NZ09 502 aa2.46□□□□□ -2.02
TOPBP1-208ENST00000511439 PIPOXQ9P0Z9 390 aa2.46□□□□□ -2.02
TOPBP1-208ENST00000511439 PRO0461Q9UI25 63 aa2.46□□□□□ -2.02
TOPBP1-208ENST00000511439 ZNF256Q9Y2P7 627 aaPredicted RBP2.46□□□□□ -2.02
TOPBP1-208ENST00000511439 SIGLEC9Q9Y336 463 aa2.46□□□□□ -2.02
TOPBP1-208ENST00000511439 ZNF337Q9Y3M9 751 aa2.46□□□□□ -2.02
TOPBP1-208ENST00000511439 ARL5AQ9Y689 179 aa2.46□□□□□ -2.02
TOPBP1-208ENST00000511439 IQANK1A0A1B0GTG1 560 aa2.45□□□□□ -2.02
TOPBP1-208ENST00000511439 ISPDA4D126 451 aa2.45□□□□□ -2.02
TOPBP1-208ENST00000511439 ZFP92A6NM28 416 aa2.45□□□□□ -2.02
TOPBP1-208ENST00000511439 DHRS7CA6NNS2 312 aa2.45□□□□□ -2.02
TOPBP1-208ENST00000511439 WRBO00258 174 aa2.45□□□□□ -2.02
TOPBP1-208ENST00000511439 DNALI1O14645 258 aaPredicted RBP2.45□□□□□ -2.02
TOPBP1-208ENST00000511439 CXCL13O43927 109 aa2.45□□□□□ -2.02
TOPBP1-208ENST00000511439 MFSD11O43934 449 aa2.45□□□□□ -2.02
TOPBP1-208ENST00000511439 CTNSO60931 367 aa2.45□□□□□ -2.02
TOPBP1-208ENST00000511439 GPX5O75715 221 aa2.45□□□□□ -2.02
TOPBP1-208ENST00000511439 LYPD3O95274 346 aa2.45□□□□□ -2.02
TOPBP1-208ENST00000511439 IGHV3-23P01764 117 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms