RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 ZNF705FA8MVS1 300 aaPredicted RBP11.53□□□□□ -0.56
GAPVD1-220ENST00000497580 ZNF705DP0CH99 300 aaPredicted RBP11.53□□□□□ -0.56
GAPVD1-220ENST00000497580 ZNF705BP0CI00 300 aaPredicted RBP11.53□□□□□ -0.56
GAPVD1-220ENST00000497580 MMP16P51512 607 aa11.53□□□□□ -0.56
GAPVD1-220ENST00000497580 VAMP2P63027 116 aa11.53□□□□□ -0.56
GAPVD1-220ENST00000497580 IL15RAQ13261 267 aa11.53□□□□□ -0.56
GAPVD1-220ENST00000497580 FAM3CQ92520 227 aa11.53□□□□□ -0.56
GAPVD1-220ENST00000497580 SLC22A18Q96BI1 424 aa11.53□□□□□ -0.56
GAPVD1-220ENST00000497580 LRFN1Q9P244 771 aa11.53□□□□□ -0.56
GAPVD1-220ENST00000497580 NSG1A0A0A6YYJ2 146 aa11.53□□□□□ -0.56
GAPVD1-220ENST00000497580 ATP6V0CP27449 155 aa11.53□□□□□ -0.56
GAPVD1-220ENST00000497580 TMEM50BP56557 158 aa11.53□□□□□ -0.56
GAPVD1-220ENST00000497580 HSD11B2P80365 405 aa11.53□□□□□ -0.56
GAPVD1-220ENST00000497580 FZD2Q14332 565 aa11.53□□□□□ -0.56
GAPVD1-220ENST00000497580 VAX1Q5SQQ9 334 aa11.53□□□□□ -0.56
GAPVD1-220ENST00000497580 ABHD12BQ7Z5M8 362 aaPredicted RBP11.53□□□□□ -0.56
GAPVD1-220ENST00000497580 SFTPA2Q8IWL1 248 aa11.53□□□□□ -0.56
GAPVD1-220ENST00000497580 OR5D14Q8NGL3 314 aa11.53□□□□□ -0.56
GAPVD1-220ENST00000497580 STT3BQ8TCJ2 826 aa11.53□□□□□ -0.56
GAPVD1-220ENST00000497580 ANKRD9Q96BM1 317 aaPredicted RBP11.53□□□□□ -0.56
GAPVD1-220ENST00000497580 HDHD3Q9BSH5 251 aaPredicted RBP11.53□□□□□ -0.56
GAPVD1-220ENST00000497580 MAGT1Q9H0U3 335 aa11.53□□□□□ -0.56
GAPVD1-220ENST00000497580 LAMP3Q9UQV4 416 aa11.53□□□□□ -0.56
GAPVD1-220ENST00000497580 FIGNL2A6NMB9 653 aa11.52□□□□□ -0.56
GAPVD1-220ENST00000497580 CYR61O00622 381 aa11.52□□□□□ -0.56
GAPVD1-220ENST00000497580 SCDO00767 359 aa11.52□□□□□ -0.56
GAPVD1-220ENST00000497580 SCGNO76038 276 aa11.52□□□□□ -0.56
GAPVD1-220ENST00000497580 RPS2P15880 293 aaKnown RBP11.52□□□□□ -0.56
GAPVD1-220ENST00000497580 PNLIPP16233 465 aa11.52□□□□□ -0.56
GAPVD1-220ENST00000497580 CFPP27918 469 aa11.52□□□□□ -0.56
GAPVD1-220ENST00000497580 BTG2P78543 158 aa11.52□□□□□ -0.56
GAPVD1-220ENST00000497580 HLA-DRB3P79483 266 aa11.52□□□□□ -0.56
GAPVD1-220ENST00000497580 SLC25A24Q6NUK1 477 aa11.52□□□□□ -0.56
GAPVD1-220ENST00000497580 BTNL3Q6UXE8 466 aa11.52□□□□□ -0.56
GAPVD1-220ENST00000497580 SLC26A10Q8NG04 563 aa11.52□□□□□ -0.56
GAPVD1-220ENST00000497580 OR52M1Q8NGK5 317 aa11.52□□□□□ -0.56
GAPVD1-220ENST00000497580 C16orf52Q8NHV5 167 aa11.52□□□□□ -0.56
GAPVD1-220ENST00000497580 C8orf44Q96CB5 159 aa11.52□□□□□ -0.56
GAPVD1-220ENST00000497580 NXT1Q9UKK6 140 aaKnown RBP11.52□□□□□ -0.56
GAPVD1-220ENST00000497580 TGOLN2O43493 480 aa11.52□□□□□ -0.57
GAPVD1-220ENST00000497580 GPR137BO60478 399 aa11.52□□□□□ -0.57
GAPVD1-220ENST00000497580 CST7O76096 145 aa11.52□□□□□ -0.57
GAPVD1-220ENST00000497580 GNRH1P01148 92 aa11.52□□□□□ -0.57
GAPVD1-220ENST00000497580 CTSBP07858 339 aa11.52□□□□□ -0.57
GAPVD1-220ENST00000497580 OR5AC1P0C628 307 aa11.52□□□□□ -0.57
GAPVD1-220ENST00000497580 PIGPP57054 158 aa11.52□□□□□ -0.57
GAPVD1-220ENST00000497580 CD81P60033 236 aa11.52□□□□□ -0.57
GAPVD1-220ENST00000497580 ERVS71-1P61550 626 aa11.52□□□□□ -0.57
GAPVD1-220ENST00000497580 PAX5Q02548 391 aa11.52□□□□□ -0.57
GAPVD1-220ENST00000497580 FDX2Q6P4F2 183 aa11.52□□□□□ -0.57
GAPVD1-220ENST00000497580 ZNF66Q6ZN08 573 aa11.52□□□□□ -0.57
GAPVD1-220ENST00000497580 KIAA1549LQ6ZVL6 1849 aa11.52□□□□□ -0.57
GAPVD1-220ENST00000497580 DAZLQ92904 295 aaKnown RBP11.52□□□□□ -0.57
GAPVD1-220ENST00000497580 RIMS4Q9H426 269 aaPredicted RBP11.52□□□□□ -0.57
GAPVD1-220ENST00000497580 G6PC2Q9NQR9 355 aa11.52□□□□□ -0.57
GAPVD1-220ENST00000497580 GABRR1P24046 479 aa11.52□□□□□ -0.57
GAPVD1-220ENST00000497580 MAS1LP35410 378 aa11.52□□□□□ -0.57
GAPVD1-220ENST00000497580 P2RY6Q15077 328 aa11.52□□□□□ -0.57
GAPVD1-220ENST00000497580 TMEM52BQ4KMG9 183 aa11.52□□□□□ -0.57
GAPVD1-220ENST00000497580 ZNF440Q8IYI8 595 aa11.52□□□□□ -0.57
GAPVD1-220ENST00000497580 OR10J5Q8NHC4 309 aa11.52□□□□□ -0.57
GAPVD1-220ENST00000497580 ADOQ96SZ5 270 aa11.52□□□□□ -0.57
GAPVD1-220ENST00000497580 PILRAQ9UKJ1 303 aa11.52□□□□□ -0.57
GAPVD1-220ENST00000497580 NUP210LQ5VU65 1888 aa11.52□□□□□ -0.57
GAPVD1-220ENST00000497580 ARHGEF17Q96PE2 2063 aaPredicted RBP11.51□□□□□ -0.57
GAPVD1-220ENST00000497580 NOTCH4Q99466 2003 aa11.51□□□□□ -0.57
GAPVD1-220ENST00000497580 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.51□□□□□ -0.57
GAPVD1-220ENST00000497580 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.51□□□□□ -0.57
GAPVD1-220ENST00000497580 FAM230AA0A1W2PPH8 454 aa11.51□□□□□ -0.57
GAPVD1-220ENST00000497580 DHRS7CA6NNS2 312 aa11.51□□□□□ -0.57
GAPVD1-220ENST00000497580 RPL36A-HNRNPH2H7BZ11 118 aa11.51□□□□□ -0.57
GAPVD1-220ENST00000497580 CDC14BO60729 498 aa11.51□□□□□ -0.57
GAPVD1-220ENST00000497580 WISP1O95388 367 aa11.51□□□□□ -0.57
GAPVD1-220ENST00000497580 HLA-DOBP13765 273 aa11.51□□□□□ -0.57
GAPVD1-220ENST00000497580 FOLR1P15328 257 aa11.51□□□□□ -0.57
GAPVD1-220ENST00000497580 OPRM1P35372 400 aa11.51□□□□□ -0.57
GAPVD1-220ENST00000497580 NOVA1P51513 510 aaKnown RBP11.51□□□□□ -0.57
GAPVD1-220ENST00000497580 RPL27P61353 136 aaKnown RBP11.51□□□□□ -0.57
GAPVD1-220ENST00000497580 COL10A1Q03692 680 aa11.51□□□□□ -0.57
GAPVD1-220ENST00000497580 ZNF141Q15928 474 aa11.51□□□□□ -0.57
GAPVD1-220ENST00000497580 CA13Q8N1Q1 262 aa11.51□□□□□ -0.57
GAPVD1-220ENST00000497580 OR4X1Q8NH49 305 aa11.51□□□□□ -0.57
GAPVD1-220ENST00000497580 GPR119Q8TDV5 335 aa11.51□□□□□ -0.57
GAPVD1-220ENST00000497580 PTX4Q96A99 478 aa11.51□□□□□ -0.57
GAPVD1-220ENST00000497580 ZFYVE21Q9BQ24 234 aa11.51□□□□□ -0.57
GAPVD1-220ENST00000497580 GINS3Q9BRX5 216 aa11.51□□□□□ -0.57
GAPVD1-220ENST00000497580 OSGIN2Q9Y236 505 aa11.51□□□□□ -0.57
GAPVD1-220ENST00000497580 CHD3Q12873 2000 aaKnown RBP11.51□□□□□ -0.57
GAPVD1-220ENST00000497580 K7N7A8 449 aa11.51□□□□□ -0.57
GAPVD1-220ENST00000497580 IL18BPO95998 194 aa11.51□□□□□ -0.57
GAPVD1-220ENST00000497580 TMEM225BP0DP42 221 aa11.51□□□□□ -0.57
GAPVD1-220ENST00000497580 HSD11B1P28845 292 aa11.51□□□□□ -0.57
GAPVD1-220ENST00000497580 ZNF77Q15935 545 aa11.51□□□□□ -0.57
GAPVD1-220ENST00000497580 EMC4Q5J8M3 183 aa11.51□□□□□ -0.57
GAPVD1-220ENST00000497580 CNKSR3Q6P9H4 555 aa11.51□□□□□ -0.57
GAPVD1-220ENST00000497580 TMEM183AQ8IXX5 376 aa11.51□□□□□ -0.57
GAPVD1-220ENST00000497580 ADAMTS18Q8TE60 1221 aa11.51□□□□□ -0.57
GAPVD1-220ENST00000497580 VSTM2LQ96N03 204 aa11.51□□□□□ -0.57
GAPVD1-220ENST00000497580 IGKV1D-8A0A087WSZ0 117 aa11.51□□□□□ -0.57
GAPVD1-220ENST00000497580 A0A1W2PQU0 124 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms