RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, human

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRCA1-222	ENST00000493919	PNMT	P11086	282 aa		10.21	□□□□□ -0.77
BRCA1-222	ENST00000493919	RPL3	P39023	403 aa	Known RBP	10.21	□□□□□ -0.77
BRCA1-222	ENST00000493919	OC90	Q02509	493 aa	Predicted RBP	10.21	□□□□□ -0.77
BRCA1-222	ENST00000493919	HGFAC	Q04756	655 aa		10.21	□□□□□ -0.77
BRCA1-222	ENST00000493919	RBBP4	Q09028	425 aa		10.21	□□□□□ -0.77
BRCA1-222	ENST00000493919	TMEM198	Q66K66	360 aa		10.21	□□□□□ -0.77
BRCA1-222	ENST00000493919	AWAT2	Q6E213	333 aa		10.21	□□□□□ -0.77
BRCA1-222	ENST00000493919	ADAM5	Q6NVV9	412 aa		10.21	□□□□□ -0.77
BRCA1-222	ENST00000493919	ENPP6	Q6UWR7	440 aa		10.21	□□□□□ -0.77
BRCA1-222	ENST00000493919	SPPL2C	Q8IUH8	684 aa		10.21	□□□□□ -0.77
BRCA1-222	ENST00000493919	C9orf40	Q8IXQ3	194 aa		10.21	□□□□□ -0.77
BRCA1-222	ENST00000493919	ZADH2	Q8N4Q0	377 aa		10.21	□□□□□ -0.77
BRCA1-222	ENST00000493919	OR56A1	Q8NGH5	318 aa		10.21	□□□□□ -0.77
BRCA1-222	ENST00000493919	NUDT8	Q8WV74	236 aa		10.21	□□□□□ -0.77
BRCA1-222	ENST00000493919	DDO	Q99489	341 aa		10.21	□□□□□ -0.77
BRCA1-222	ENST00000493919	DPY30	Q9C005	99 aa		10.21	□□□□□ -0.77
BRCA1-222	ENST00000493919	CXorf36	Q9H7Y0	433 aa		10.21	□□□□□ -0.77
BRCA1-222	ENST00000493919	ASIC5	Q9NY37	505 aa		10.21	□□□□□ -0.77
BRCA1-222	ENST00000493919	ELOVL5	Q9NYP7	299 aa		10.21	□□□□□ -0.77
BRCA1-222	ENST00000493919	CHST2	Q9Y4C5	530 aa		10.21	□□□□□ -0.77
BRCA1-222	ENST00000493919	CNTRL	Q7Z7A1	2325 aa		10.21	□□□□□ -0.77
BRCA1-222	ENST00000493919	PPIAL4E	A0A075B759	164 aa		10.21	□□□□□ -0.78
BRCA1-222	ENST00000493919	PPIAL4C	A0A0B4J2A2	164 aa		10.21	□□□□□ -0.78
BRCA1-222	ENST00000493919		C9JVG2	144 aa		10.21	□□□□□ -0.78
BRCA1-222	ENST00000493919	PPIAL4D	F5H284	164 aa		10.21	□□□□□ -0.78
BRCA1-222	ENST00000493919	SIVA1	O15304	175 aa		10.21	□□□□□ -0.78
BRCA1-222	ENST00000493919	NCR1	O76036	304 aa		10.21	□□□□□ -0.78
BRCA1-222	ENST00000493919	HIST1H2AB	P04908	130 aa		10.21	□□□□□ -0.78
BRCA1-222	ENST00000493919	PPIAL4F	P0DN26	164 aa		10.21	□□□□□ -0.78
BRCA1-222	ENST00000493919	HOXB6	P17509	224 aa	Known RBP	10.21	□□□□□ -0.78
BRCA1-222	ENST00000493919	AKR1C2	P52895	323 aa		10.21	□□□□□ -0.78
BRCA1-222	ENST00000493919	PNLIPRP2	P54317	469 aa		10.21	□□□□□ -0.78
BRCA1-222	ENST00000493919	CLDN12	P56749	244 aa		10.21	□□□□□ -0.78
BRCA1-222	ENST00000493919	PDE7A	Q13946	482 aa		10.21	□□□□□ -0.78
BRCA1-222	ENST00000493919	CRMP1	Q14194	572 aa		10.21	□□□□□ -0.78
BRCA1-222	ENST00000493919	OR10K2	Q6IF99	312 aa		10.21	□□□□□ -0.78
BRCA1-222	ENST00000493919	HIST3H2A	Q7L7L0	130 aa		10.21	□□□□□ -0.78
BRCA1-222	ENST00000493919	ZNF367	Q7RTV3	350 aa		10.21	□□□□□ -0.78
BRCA1-222	ENST00000493919	SDR9C7	Q8NEX9	313 aa		10.21	□□□□□ -0.78
BRCA1-222	ENST00000493919	HIST1H2AC	Q93077	130 aa		10.21	□□□□□ -0.78
BRCA1-222	ENST00000493919	OR7D2	Q96RA2	312 aa		10.21	□□□□□ -0.78
BRCA1-222	ENST00000493919	GLIPR2	Q9H4G4	154 aa		10.21	□□□□□ -0.78
BRCA1-222	ENST00000493919		Q9N2J8	555 aa		10.21	□□□□□ -0.78
BRCA1-222	ENST00000493919	MRPL15	Q9P015	296 aa	Known RBP	10.21	□□□□□ -0.78
BRCA1-222	ENST00000493919	AQP7	O14520	342 aa		10.2	□□□□□ -0.78
BRCA1-222	ENST00000493919	SNAI2	O43623	268 aa		10.2	□□□□□ -0.78
BRCA1-222	ENST00000493919	FABP4	P15090	132 aa		10.2	□□□□□ -0.78
BRCA1-222	ENST00000493919	SDC2	P34741	201 aa		10.2	□□□□□ -0.78
BRCA1-222	ENST00000493919	RPL29	P47914	159 aa	Known RBP	10.2	□□□□□ -0.78
BRCA1-222	ENST00000493919	SLC6A8	P48029	635 aa		10.2	□□□□□ -0.78
BRCA1-222	ENST00000493919	MTNR1A	P48039	350 aa		10.2	□□□□□ -0.78
BRCA1-222	ENST00000493919	BID	P55957	195 aa		10.2	□□□□□ -0.78
BRCA1-222	ENST00000493919	KLRB1	Q12918	225 aa		10.2	□□□□□ -0.78
BRCA1-222	ENST00000493919	EBP	Q15125	230 aa	Known RBP	10.2	□□□□□ -0.78
BRCA1-222	ENST00000493919	NNAT	Q16517	81 aa		10.2	□□□□□ -0.78
BRCA1-222	ENST00000493919	TRMT12	Q53H54	448 aa	Known RBP	10.2	□□□□□ -0.78
BRCA1-222	ENST00000493919	CPTP	Q5TA50	214 aa		10.2	□□□□□ -0.78
BRCA1-222	ENST00000493919	HLA-DQA1	Q5Y7H0	255 aa		10.2	□□□□□ -0.78
BRCA1-222	ENST00000493919	CCDC144NL	Q6NUI1	221 aa		10.2	□□□□□ -0.78
BRCA1-222	ENST00000493919	TBPL2	Q6SJ96	375 aa		10.2	□□□□□ -0.78
BRCA1-222	ENST00000493919	GLCCI1	Q86VQ1	547 aa		10.2	□□□□□ -0.78
BRCA1-222	ENST00000493919	RBMXL3	Q8N7X1	1067 aa	Known RBP	10.2	□□□□□ -0.78
BRCA1-222	ENST00000493919	OR10G3	Q8NGC4	313 aa		10.2	□□□□□ -0.78
BRCA1-222	ENST00000493919	OR52R1	Q8NGF1	315 aa		10.2	□□□□□ -0.78
BRCA1-222	ENST00000493919	NRIP2	Q9BQI9	281 aa		10.2	□□□□□ -0.78
BRCA1-222	ENST00000493919	MIEN1	Q9BRT3	115 aa		10.2	□□□□□ -0.78
BRCA1-222	ENST00000493919	AMBRA1	Q9C0C7	1298 aa		10.2	□□□□□ -0.78
BRCA1-222	ENST00000493919	ARL6	Q9H0F7	186 aa		10.2	□□□□□ -0.78
BRCA1-222	ENST00000493919	OR51E2	Q9H255	320 aa		10.2	□□□□□ -0.78
BRCA1-222	ENST00000493919	AIG1	Q9NVV5	245 aa		10.2	□□□□□ -0.78
BRCA1-222	ENST00000493919	MRM2	Q9UI43	246 aa	Known RBP	10.2	□□□□□ -0.78
BRCA1-222	ENST00000493919	LRP12	Q9Y561	859 aa		10.2	□□□□□ -0.78
BRCA1-222	ENST00000493919	LOC100289279	A0A1B0GTE1	492 aa		10.19	□□□□□ -0.78
BRCA1-222	ENST00000493919	BBIP1	A8MTZ0	92 aa		10.19	□□□□□ -0.78
BRCA1-222	ENST00000493919	NME6	O75414	186 aa	Predicted RBP	10.19	□□□□□ -0.78
BRCA1-222	ENST00000493919	TXNDC12	O95881	172 aa		10.19	□□□□□ -0.78
BRCA1-222	ENST00000493919	CLPS	P04118	112 aa		10.19	□□□□□ -0.78
BRCA1-222	ENST00000493919	THY1	P04216	161 aa		10.19	□□□□□ -0.78
BRCA1-222	ENST00000493919	LAMP1	P11279	417 aa		10.19	□□□□□ -0.78
BRCA1-222	ENST00000493919	APLNR	P35414	380 aa		10.19	□□□□□ -0.78
BRCA1-222	ENST00000493919	GIPR	P48546	466 aa		10.19	□□□□□ -0.78
BRCA1-222	ENST00000493919	ZNF84	P51523	738 aa		10.19	□□□□□ -0.78
BRCA1-222	ENST00000493919	F2RL1	P55085	397 aa		10.19	□□□□□ -0.78
BRCA1-222	ENST00000493919	MANF	P55145	182 aa	Known RBP	10.19	□□□□□ -0.78
BRCA1-222	ENST00000493919	RHOG	P84095	191 aa		10.19	□□□□□ -0.78
BRCA1-222	ENST00000493919	PAX2	Q02962	417 aa		10.19	□□□□□ -0.78
BRCA1-222	ENST00000493919	MGAT2	Q10469	447 aa		10.19	□□□□□ -0.78
BRCA1-222	ENST00000493919	FUT7	Q11130	342 aa		10.19	□□□□□ -0.78
BRCA1-222	ENST00000493919	TMEM177	Q53S58	311 aa		10.19	□□□□□ -0.78
BRCA1-222	ENST00000493919	OR4A47	Q6IF82	309 aa		10.19	□□□□□ -0.78
BRCA1-222	ENST00000493919	ZNF613	Q6PF04	617 aa		10.19	□□□□□ -0.78
BRCA1-222	ENST00000493919	IGFL2	Q6UWQ7	119 aa		10.19	□□□□□ -0.78
BRCA1-222	ENST00000493919	LGI4	Q8N135	537 aa		10.19	□□□□□ -0.78
BRCA1-222	ENST00000493919	GATS	Q8NAP1	163 aa		10.19	□□□□□ -0.78
BRCA1-222	ENST00000493919	ST6GALNAC3	Q8NDV1	305 aa		10.19	□□□□□ -0.78
BRCA1-222	ENST00000493919	OR51S1	Q8NGJ8	323 aa		10.19	□□□□□ -0.78
BRCA1-222	ENST00000493919	C16orf52	Q8NHV5	167 aa		10.19	□□□□□ -0.78
BRCA1-222	ENST00000493919	ZNF675	Q8TD23	568 aa		10.19	□□□□□ -0.78
BRCA1-222	ENST00000493919	EAF1	Q96JC9	268 aa	Predicted RBP	10.19	□□□□□ -0.78
BRCA1-222	ENST00000493919	MEGF9	Q9H1U4	602 aa		10.19	□□□□□ -0.78

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