RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 CSNK1A1P48729 337 aa6.73□□□□□ -1.33
SNX13-208ENST00000482558 CCR6P51684 374 aa6.73□□□□□ -1.33
SNX13-208ENST00000482558 SUCLG1P53597 346 aaKnown RBP6.73□□□□□ -1.33
SNX13-208ENST00000482558 CLDN12P56749 244 aa6.73□□□□□ -1.33
SNX13-208ENST00000482558 RPS15P62841 145 aaKnown RBP6.73□□□□□ -1.33
SNX13-208ENST00000482558 MFGE8Q08431 387 aaPredicted RBP6.73□□□□□ -1.33
SNX13-208ENST00000482558 MPPED2Q15777 294 aa6.73□□□□□ -1.33
SNX13-208ENST00000482558 GLYATL3Q5SZD4 288 aa6.73□□□□□ -1.33
SNX13-208ENST00000482558 RTL6Q6ICC9 239 aa6.73□□□□□ -1.33
SNX13-208ENST00000482558 LCN10Q6JVE6 187 aa6.73□□□□□ -1.33
SNX13-208ENST00000482558 H3F3CQ6NXT2 135 aa6.73□□□□□ -1.33
SNX13-208ENST00000482558 ZNF813Q6ZN06 617 aa6.73□□□□□ -1.33
SNX13-208ENST00000482558 C16orf47Q6ZP98 133 aaPredicted RBP6.73□□□□□ -1.33
SNX13-208ENST00000482558 FOXL2NBQ6ZUU3 175 aa6.73□□□□□ -1.33
SNX13-208ENST00000482558 RNF144BQ7Z419 303 aa6.73□□□□□ -1.33
SNX13-208ENST00000482558 GLCCI1Q86VQ1 547 aa6.73□□□□□ -1.33
SNX13-208ENST00000482558 FAM219AQ8IW50 185 aa6.73□□□□□ -1.33
SNX13-208ENST00000482558 JAGN1Q8N5M9 183 aa6.73□□□□□ -1.33
SNX13-208ENST00000482558 CLEC1AQ8NC01 280 aa6.73□□□□□ -1.33
SNX13-208ENST00000482558 TMEM185AQ8NFB2 350 aa6.73□□□□□ -1.33
SNX13-208ENST00000482558 OR1M1Q8NGA1 313 aa6.73□□□□□ -1.33
SNX13-208ENST00000482558 OR11G2Q8NGC1 345 aa6.73□□□□□ -1.33
SNX13-208ENST00000482558 OR51A4Q8NGJ6 313 aa6.73□□□□□ -1.33
SNX13-208ENST00000482558 OR10AC1Q8NH08 325 aa6.73□□□□□ -1.33
SNX13-208ENST00000482558 ZNF431Q8TF32 576 aaPredicted RBP6.73□□□□□ -1.33
SNX13-208ENST00000482558 TMEM54Q969K7 222 aa6.73□□□□□ -1.33
SNX13-208ENST00000482558 FAM46BQ96A09 425 aa6.73□□□□□ -1.33
SNX13-208ENST00000482558 RRNAD1Q96FB5 475 aaKnown RBP6.73□□□□□ -1.33
SNX13-208ENST00000482558 IP6K3Q96PC2 410 aa6.73□□□□□ -1.33
SNX13-208ENST00000482558 ELOVL1Q9BW60 279 aa6.73□□□□□ -1.33
SNX13-208ENST00000482558 GPR87Q9BY21 358 aa6.73□□□□□ -1.33
SNX13-208ENST00000482558 GPR61Q9BZJ8 451 aa6.73□□□□□ -1.33
SNX13-208ENST00000482558 ZNF436Q9C0F3 470 aaPredicted RBP6.73□□□□□ -1.33
SNX13-208ENST00000482558 B3GNT4Q9C0J1 378 aa6.73□□□□□ -1.33
SNX13-208ENST00000482558 VCX2Q9H322 139 aa6.73□□□□□ -1.33
SNX13-208ENST00000482558 AUNIPQ9H7T9 357 aa6.73□□□□□ -1.33
SNX13-208ENST00000482558 TAS2R4Q9NYW5 299 aa6.73□□□□□ -1.33
SNX13-208ENST00000482558 GLTPQ9NZD2 209 aa6.73□□□□□ -1.33
SNX13-208ENST00000482558 KLK11Q9UBX7 282 aa6.73□□□□□ -1.33
SNX13-208ENST00000482558 ZNF391Q9UJN7 358 aa6.73□□□□□ -1.33
SNX13-208ENST00000482558 ING1Q9UK53 422 aaPredicted RBP6.73□□□□□ -1.33
SNX13-208ENST00000482558 FBXL2Q9UKC9 423 aa6.73□□□□□ -1.33
SNX13-208ENST00000482558 XIRP2A4UGR9 3374 aa6.72□□□□□ -1.33
SNX13-208ENST00000482558 A0A0U1RQV5 110 aa6.72□□□□□ -1.33
SNX13-208ENST00000482558 A0A1B0GTH9 108 aa6.72□□□□□ -1.33
SNX13-208ENST00000482558 TUBAL3A6NHL2 446 aa6.72□□□□□ -1.33
SNX13-208ENST00000482558 C17orf51A8MQB3 221 aa6.72□□□□□ -1.33
SNX13-208ENST00000482558 C21orf140B9A014 251 aa6.72□□□□□ -1.33
SNX13-208ENST00000482558 DISC1C4P0D8 188 aa6.72□□□□□ -1.33
SNX13-208ENST00000482558 NDUFS8O00217 210 aa6.72□□□□□ -1.33
SNX13-208ENST00000482558 HS3ST1O14792 307 aa6.72□□□□□ -1.33
SNX13-208ENST00000482558 ZNF780AO75290 641 aaPredicted RBP6.72□□□□□ -1.33
SNX13-208ENST00000482558 TTRP02766 147 aa6.72□□□□□ -1.33
SNX13-208ENST00000482558 SERPINA7P05543 415 aa6.72□□□□□ -1.33
SNX13-208ENST00000482558 GTF2F2P13984 249 aa6.72□□□□□ -1.33
SNX13-208ENST00000482558 RPS27P42677 84 aaKnown RBP6.72□□□□□ -1.33
SNX13-208ENST00000482558 MAGEB1P43366 347 aa6.72□□□□□ -1.33
SNX13-208ENST00000482558 CBX5P45973 191 aa6.72□□□□□ -1.33
SNX13-208ENST00000482558 CARD18P57730 90 aa6.72□□□□□ -1.33
SNX13-208ENST00000482558 FMODQ06828 376 aa6.72□□□□□ -1.33
SNX13-208ENST00000482558 ODF4Q2M2E3 257 aa6.72□□□□□ -1.33
SNX13-208ENST00000482558 ACTBL2Q562R1 376 aa6.72□□□□□ -1.33
SNX13-208ENST00000482558 CLVS2Q5SYC1 327 aa6.72□□□□□ -1.33
SNX13-208ENST00000482558 PRAMEF20Q5VT98 475 aa6.72□□□□□ -1.33
SNX13-208ENST00000482558 RAET1LQ5VY80 246 aa6.72□□□□□ -1.33
SNX13-208ENST00000482558 ZNF626Q68DY1 528 aa6.72□□□□□ -1.33
SNX13-208ENST00000482558 STEAP1BQ6NZ63 245 aa6.72□□□□□ -1.33
SNX13-208ENST00000482558 LPCAT3Q6P1A2 487 aa6.72□□□□□ -1.33
SNX13-208ENST00000482558 LYPD6Q86Y78 171 aa6.72□□□□□ -1.33
SNX13-208ENST00000482558 PNLDC1Q8NA58 520 aaKnown RBP6.72□□□□□ -1.33
SNX13-208ENST00000482558 OR56B1Q8NGI3 324 aa6.72□□□□□ -1.33
SNX13-208ENST00000482558 KCNG3Q8TAE7 436 aa6.72□□□□□ -1.33
SNX13-208ENST00000482558 PP6455Q8WZ26 134 aa6.72□□□□□ -1.33
SNX13-208ENST00000482558 ATOH1Q92858 354 aaPredicted RBP6.72□□□□□ -1.33
SNX13-208ENST00000482558 SPTSSAQ969W0 71 aa6.72□□□□□ -1.33
SNX13-208ENST00000482558 ORAI1Q96D31 301 aa6.72□□□□□ -1.33
SNX13-208ENST00000482558 PRRT1Q99946 306 aa6.72□□□□□ -1.33
SNX13-208ENST00000482558 MEGF9Q9H1U4 602 aa6.72□□□□□ -1.33
SNX13-208ENST00000482558 SLC2A8Q9NY64 477 aa6.72□□□□□ -1.33
SNX13-208ENST00000482558 HSPB11Q9Y547 144 aa6.72□□□□□ -1.33
SNX13-208ENST00000482558 SERTM2A0A1B0GWG4 89 aa6.71□□□□□ -1.34
SNX13-208ENST00000482558 OR6C65A6NJZ3 312 aa6.71□□□□□ -1.34
SNX13-208ENST00000482558 ZNF736B4DX44 427 aaPredicted RBP6.71□□□□□ -1.34
SNX13-208ENST00000482558 P2RY10O00398 339 aa6.71□□□□□ -1.34
SNX13-208ENST00000482558 ARPC1BO15143 372 aaKnown RBP6.71□□□□□ -1.34
SNX13-208ENST00000482558 ZIC3O60481 467 aa6.71□□□□□ -1.34
SNX13-208ENST00000482558 GMDSO60547 372 aa6.71□□□□□ -1.34
SNX13-208ENST00000482558 STK17BO94768 372 aa6.71□□□□□ -1.34
SNX13-208ENST00000482558 OR2A4O95047 310 aa6.71□□□□□ -1.34
SNX13-208ENST00000482558 MPZL1O95297 269 aa6.71□□□□□ -1.34
SNX13-208ENST00000482558 IFNA7P01567 189 aa6.71□□□□□ -1.34
SNX13-208ENST00000482558 CD74P04233 296 aa6.71□□□□□ -1.34
SNX13-208ENST00000482558 CCL4P13236 92 aa6.71□□□□□ -1.34
SNX13-208ENST00000482558 ZNF24P17028 368 aa6.71□□□□□ -1.34
SNX13-208ENST00000482558 EDN2P20800 178 aa6.71□□□□□ -1.34
SNX13-208ENST00000482558 SFTPDP35247 375 aa6.71□□□□□ -1.34
SNX13-208ENST00000482558 ALDH3B1P43353 468 aa6.71□□□□□ -1.34
SNX13-208ENST00000482558 VEGFCP49767 419 aa6.71□□□□□ -1.34
SNX13-208ENST00000482558 CLDN6P56747 220 aa6.71□□□□□ -1.34
SNX13-208ENST00000482558 CLDN17P56750 224 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms