RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 SLC34A1Q06495 639 aa13.74□□□□□ -0.21
VIM-204ENST00000478746 SMIM21Q3B7S5 101 aa13.74□□□□□ -0.21
VIM-204ENST00000478746 CEACAM21Q3KPI0 293 aa13.74□□□□□ -0.21
VIM-204ENST00000478746 KLHL22Q53GT1 634 aa13.74□□□□□ -0.21
VIM-204ENST00000478746 CEP78Q5JTW2 689 aa13.74□□□□□ -0.21
VIM-204ENST00000478746 LCN8Q6JVE9 175 aa13.74□□□□□ -0.21
VIM-204ENST00000478746 HAGHLQ6PII5 290 aaPredicted RBP13.74□□□□□ -0.21
VIM-204ENST00000478746 UNQ9370/PRO34162Q6UXP9 181 aa13.74□□□□□ -0.21
VIM-204ENST00000478746 ERI1Q8IV48 349 aaKnown RBP13.74□□□□□ -0.21
VIM-204ENST00000478746 PYURFQ96I23 114 aa13.74□□□□□ -0.21
VIM-204ENST00000478746 INTS14Q96SY0 518 aa13.74□□□□□ -0.21
VIM-204ENST00000478746 IL20Q9NYY1 176 aa13.74□□□□□ -0.21
VIM-204ENST00000478746 PCDHGB5Q9Y5G0 923 aa13.74□□□□□ -0.21
VIM-204ENST00000478746 FAM90A22PA8MWA6 464 aa13.73□□□□□ -0.21
VIM-204ENST00000478746 DCTN3O75935 186 aa13.73□□□□□ -0.21
VIM-204ENST00000478746 CCDC159P0C7I6 412 aa13.73□□□□□ -0.21
VIM-204ENST00000478746 PIPP12273 146 aaPredicted RBP13.73□□□□□ -0.21
VIM-204ENST00000478746 CEBPDP49716 269 aaPredicted RBP13.73□□□□□ -0.21
VIM-204ENST00000478746 ZNF770Q6IQ21 691 aaPredicted RBP13.73□□□□□ -0.21
VIM-204ENST00000478746 SHFQ7M4L6 423 aa13.73□□□□□ -0.21
VIM-204ENST00000478746 MRPL41Q8IXM3 137 aaKnown RBP13.73□□□□□ -0.21
VIM-204ENST00000478746 OR5A2Q8NGI9 324 aa13.73□□□□□ -0.21
VIM-204ENST00000478746 FAM81AQ8TBF8 368 aa13.73□□□□□ -0.21
VIM-204ENST00000478746 MCUR1Q96AQ8 359 aa13.73□□□□□ -0.21
VIM-204ENST00000478746 AMELYQ99218 206 aa13.73□□□□□ -0.21
VIM-204ENST00000478746 MCRIP2Q9BUT9 160 aaKnown RBP13.73□□□□□ -0.21
VIM-204ENST00000478746 ZMAT5Q9UDW3 170 aaKnown RBP13.73□□□□□ -0.21
VIM-204ENST00000478746 DYNC2H1Q8NCM8 4307 aaKnown RBP13.72□□□□□ -0.21
VIM-204ENST00000478746 TK1P04183 234 aa13.72□□□□□ -0.21
VIM-204ENST00000478746 SEMG1P04279 462 aa13.72□□□□□ -0.21
VIM-204ENST00000478746 LPLP06858 475 aa13.72□□□□□ -0.21
VIM-204ENST00000478746 ZNF728P0DKX0 622 aa13.72□□□□□ -0.21
VIM-204ENST00000478746 RRM2P31350 389 aa13.72□□□□□ -0.21
VIM-204ENST00000478746 MAP2K3P46734 347 aa13.72□□□□□ -0.21
VIM-204ENST00000478746 DMRTC1Q5HYR2 192 aa13.72□□□□□ -0.21
VIM-204ENST00000478746 LINC01590Q5TEZ4 76 aa13.72□□□□□ -0.21
VIM-204ENST00000478746 MINOS1Q5TGZ0 78 aa13.72□□□□□ -0.21
VIM-204ENST00000478746 MOB3CQ70IA8 216 aa13.72□□□□□ -0.21
VIM-204ENST00000478746 POC1AQ8NBT0 407 aa13.72□□□□□ -0.21
VIM-204ENST00000478746 OR8D4Q8NGM9 314 aa13.72□□□□□ -0.21
VIM-204ENST00000478746 CAPSLQ8WWF8 208 aa13.72□□□□□ -0.21
VIM-204ENST00000478746 AKR1E2Q96JD6 320 aa13.72□□□□□ -0.21
VIM-204ENST00000478746 ZNF488Q96MN9 340 aa13.72□□□□□ -0.21
VIM-204ENST00000478746 TSSK6Q9BXA6 273 aa13.72□□□□□ -0.21
VIM-204ENST00000478746 GORASP2Q9H8Y8 452 aa13.72□□□□□ -0.21
VIM-204ENST00000478746 SPAG4Q9NPE6 437 aa13.72□□□□□ -0.21
VIM-204ENST00000478746 TBC1D23Q9NUY8 699 aa13.72□□□□□ -0.21
VIM-204ENST00000478746 MINOS1-NBL1R4GNA1 71 aa13.72□□□□□ -0.21
VIM-204ENST00000478746 TENM2Q9NT68 2774 aa13.72□□□□□ -0.21
VIM-204ENST00000478746 RBP4P02753 201 aa13.71□□□□□ -0.21
VIM-204ENST00000478746 IGHV1-8P0DP01 117 aa13.71□□□□□ -0.21
VIM-204ENST00000478746 GSTT1P30711 240 aa13.71□□□□□ -0.21
VIM-204ENST00000478746 CBX1P83916 185 aa13.71□□□□□ -0.21
VIM-204ENST00000478746 ABCA11PQ4W5N1 156 aa13.71□□□□□ -0.21
VIM-204ENST00000478746 C10orf99Q6UWK7 81 aa13.71□□□□□ -0.21
VIM-204ENST00000478746 KRT74Q7RTS7 529 aa13.71□□□□□ -0.21
VIM-204ENST00000478746 C16orf82Q7Z2V1 217 aa13.71□□□□□ -0.21
VIM-204ENST00000478746 RNF148Q8N7C7 305 aa13.71□□□□□ -0.21
VIM-204ENST00000478746 OR51D1Q8NGF3 324 aa13.71□□□□□ -0.21
VIM-204ENST00000478746 NDNFQ8TB73 568 aa13.71□□□□□ -0.21
VIM-204ENST00000478746 MEX3AA1L020 520 aaKnown RBP13.7□□□□□ -0.22
VIM-204ENST00000478746 OR5B21A6NL26 309 aa13.7□□□□□ -0.22
VIM-204ENST00000478746 IFNGP01579 166 aa13.7□□□□□ -0.22
VIM-204ENST00000478746 FABP3P05413 133 aa13.7□□□□□ -0.22
VIM-204ENST00000478746 DGCR2P98153 550 aa13.7□□□□□ -0.22
VIM-204ENST00000478746 SAMD4BQ5PRF9 694 aaKnown RBP13.7□□□□□ -0.22
VIM-204ENST00000478746 RASSF6Q6ZTQ3 369 aa13.7□□□□□ -0.22
VIM-204ENST00000478746 OR8B12Q8NGG6 310 aa13.7□□□□□ -0.22
VIM-204ENST00000478746 THEM6Q8WUY1 208 aa13.7□□□□□ -0.22
VIM-204ENST00000478746 STMN2Q93045 179 aa13.7□□□□□ -0.22
VIM-204ENST00000478746 OR8B4Q96RC9 309 aa13.7□□□□□ -0.22
VIM-204ENST00000478746 ZNF649Q9BS31 505 aa13.7□□□□□ -0.22
VIM-204ENST00000478746 MYLK2Q9H1R3 596 aa13.7□□□□□ -0.22
VIM-204ENST00000478746 OR14J1Q9UGF5 321 aa13.7□□□□□ -0.22
VIM-204ENST00000478746 BAIAP2Q9UQB8 552 aa13.7□□□□□ -0.22
VIM-204ENST00000478746 RYR2Q92736 4967 aa13.7□□□□□ -0.22
VIM-204ENST00000478746 NXPH2O95156 264 aa13.69□□□□□ -0.22
VIM-204ENST00000478746 ZFPL1O95159 310 aa13.69□□□□□ -0.22
VIM-204ENST00000478746 LYNP07948 512 aa13.69□□□□□ -0.22
VIM-204ENST00000478746 PGA5P0DJD9 388 aa13.69□□□□□ -0.22
VIM-204ENST00000478746 THBS3P49746 956 aa13.69□□□□□ -0.22
VIM-204ENST00000478746 ACTA2P62736 377 aa13.69□□□□□ -0.22
VIM-204ENST00000478746 ACTG2P63267 376 aa13.69□□□□□ -0.22
VIM-204ENST00000478746 ACTC1P68032 377 aa13.69□□□□□ -0.22
VIM-204ENST00000478746 ACTA1P68133 377 aa13.69□□□□□ -0.22
VIM-204ENST00000478746 ETV3LQ6ZN32 361 aa13.69□□□□□ -0.22
VIM-204ENST00000478746 OR9Q2Q8NGE9 314 aa13.69□□□□□ -0.22
VIM-204ENST00000478746 OR4Q3Q8NH05 313 aa13.69□□□□□ -0.22
VIM-204ENST00000478746 TFAP2CQ92754 450 aa13.69□□□□□ -0.22
VIM-204ENST00000478746 OTULINQ96BN8 352 aa13.69□□□□□ -0.22
VIM-204ENST00000478746 CMTM5Q96DZ9 223 aa13.69□□□□□ -0.22
VIM-204ENST00000478746 MED20Q9H944 212 aa13.69□□□□□ -0.22
VIM-204ENST00000478746 LIN7BQ9HAP6 207 aa13.69□□□□□ -0.22
VIM-204ENST00000478746 MAGEL2Q9UJ55 1249 aa13.69□□□□□ -0.22
VIM-204ENST00000478746 EPPK1P58107 5090 aaKnown RBP13.69□□□□□ -0.22
VIM-204ENST00000478746 STAB2Q8WWQ8 2551 aa13.68□□□□□ -0.22
VIM-204ENST00000478746 RIIAD1A6NNX1 92 aa13.68□□□□□ -0.22
VIM-204ENST00000478746 K7N7A8 449 aa13.68□□□□□ -0.22
VIM-204ENST00000478746 NOS1APO75052 506 aaPredicted RBP13.68□□□□□ -0.22
VIM-204ENST00000478746 KRT36O76013 467 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms