RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 TIGD4Q8IY51 512 aa4.79□□□□□ -1.64
VARS-222ENST00000470953 ZDHHC23Q8IYP9 409 aa4.79□□□□□ -1.64
VARS-222ENST00000470953 CELF2-AS1Q8N7Q2 184 aa4.79□□□□□ -1.64
VARS-222ENST00000470953 TCEANCQ8N8B7 351 aa4.79□□□□□ -1.64
VARS-222ENST00000470953 OR51G2Q8NGK0 314 aa4.79□□□□□ -1.64
VARS-222ENST00000470953 TMEM163Q8TC26 289 aa4.79□□□□□ -1.64
VARS-222ENST00000470953 RAB40AQ8WXH6 277 aa4.79□□□□□ -1.64
VARS-222ENST00000470953 LRTOMTQ8WZ04 291 aa4.79□□□□□ -1.64
VARS-222ENST00000470953 RFKQ969G6 155 aa4.79□□□□□ -1.64
VARS-222ENST00000470953 ERGIC1Q969X5 290 aa4.79□□□□□ -1.64
VARS-222ENST00000470953 UTP4Q969X6 686 aaKnown RBP4.79□□□□□ -1.64
VARS-222ENST00000470953 NEIL1Q96FI4 390 aaPredicted RBP4.79□□□□□ -1.64
VARS-222ENST00000470953 CENPNQ96H22 339 aaPredicted RBP4.79□□□□□ -1.64
VARS-222ENST00000470953 MED30Q96HR3 178 aa4.79□□□□□ -1.64
VARS-222ENST00000470953 IL4I1Q96RQ9 567 aa4.79□□□□□ -1.64
VARS-222ENST00000470953 CIB1Q99828 191 aa4.79□□□□□ -1.64
VARS-222ENST00000470953 GABARAPL1Q9H0R8 117 aa4.79□□□□□ -1.64
VARS-222ENST00000470953 MOB1AQ9H8S9 216 aa4.79□□□□□ -1.64
VARS-222ENST00000470953 C1orf123Q9NWV4 160 aa4.79□□□□□ -1.64
VARS-222ENST00000470953 PPP1R14DQ9NXH3 145 aa4.79□□□□□ -1.64
VARS-222ENST00000470953 RNF7Q9UBF6 113 aa4.79□□□□□ -1.64
VARS-222ENST00000470953 DNAJB11Q9UBS4 358 aa4.79□□□□□ -1.64
VARS-222ENST00000470953 FBLN5Q9UBX5 448 aa4.79□□□□□ -1.64
VARS-222ENST00000470953 ZNF391Q9UJN7 358 aa4.79□□□□□ -1.64
VARS-222ENST00000470953 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.79□□□□□ -1.64
VARS-222ENST00000470953 LRP12Q9Y561 859 aa4.79□□□□□ -1.64
VARS-222ENST00000470953 MYCBP2O75592 4640 aa4.78□□□□□ -1.64
VARS-222ENST00000470953 TRAV38-1A0A0B4J264 116 aa4.78□□□□□ -1.64
VARS-222ENST00000470953 CENPVL3A0A0U1RRI6 287 aa4.78□□□□□ -1.64
VARS-222ENST00000470953 KIR2DS1A0A191URI9 304 aa4.78□□□□□ -1.64
VARS-222ENST00000470953 hCG_38984A0A1B0GV85 526 aa4.78□□□□□ -1.64
VARS-222ENST00000470953 TMEM269A0A1B0GVZ9 245 aa4.78□□□□□ -1.64
VARS-222ENST00000470953 OOEPA6NGQ2 149 aa4.78□□□□□ -1.64
VARS-222ENST00000470953 SNTNA6NMZ2 147 aa4.78□□□□□ -1.64
VARS-222ENST00000470953 LOC110117498-PIK3R3F6TDL0 507 aa4.78□□□□□ -1.64
VARS-222ENST00000470953 LGALS8O00214 317 aa4.78□□□□□ -1.64
VARS-222ENST00000470953 ADAM20O43506 726 aa4.78□□□□□ -1.64
VARS-222ENST00000470953 ENSAO43768 121 aaKnown RBP4.78□□□□□ -1.64
VARS-222ENST00000470953 LY6G6CO95867 125 aa4.78□□□□□ -1.64
VARS-222ENST00000470953 KRT8P05787 483 aa4.78□□□□□ -1.64
VARS-222ENST00000470953 WNT2P09544 360 aa4.78□□□□□ -1.64
VARS-222ENST00000470953 OCM2P0CE71 109 aa4.78□□□□□ -1.64
VARS-222ENST00000470953 OCMP0CE72 109 aaPredicted RBP4.78□□□□□ -1.64
VARS-222ENST00000470953 GATA4P43694 442 aa4.78□□□□□ -1.64
VARS-222ENST00000470953 GSK3AP49840 483 aa4.78□□□□□ -1.64
VARS-222ENST00000470953 DAPP51397 102 aa4.78□□□□□ -1.64
VARS-222ENST00000470953 CXCR4P61073 352 aa4.78□□□□□ -1.64
VARS-222ENST00000470953 POU4F2Q12837 409 aa4.78□□□□□ -1.64
VARS-222ENST00000470953 ZNF181Q2M3W8 571 aa4.78□□□□□ -1.64
VARS-222ENST00000470953 ZNF404Q494X3 552 aa4.78□□□□□ -1.64
VARS-222ENST00000470953 GPR157Q5UAW9 335 aa4.78□□□□□ -1.64
VARS-222ENST00000470953 SLX4IPQ5VYV7 408 aa4.78□□□□□ -1.64
VARS-222ENST00000470953 NXNL2Q5VZ03 156 aa4.78□□□□□ -1.64
VARS-222ENST00000470953 PLCXD3Q63HM9 321 aa4.78□□□□□ -1.64
VARS-222ENST00000470953 SFRP4Q6FHJ7 346 aaPredicted RBP4.78□□□□□ -1.64
VARS-222ENST00000470953 ZNF322Q6U7Q0 402 aaPredicted RBP4.78□□□□□ -1.64
VARS-222ENST00000470953 GDPGP1Q6ZNW5 385 aa4.78□□□□□ -1.64
VARS-222ENST00000470953 DCDC5Q6ZRR9 648 aa4.78□□□□□ -1.64
VARS-222ENST00000470953 LRRC28Q86X40 367 aaPredicted RBP4.78□□□□□ -1.64
VARS-222ENST00000470953 LDLRAD3Q86YD5 345 aa4.78□□□□□ -1.64
VARS-222ENST00000470953 SLC35F2Q8IXU6 374 aa4.78□□□□□ -1.64
VARS-222ENST00000470953 YIPF7Q8N8F6 280 aa4.78□□□□□ -1.64
VARS-222ENST00000470953 C19orf18Q8NEA5 215 aa4.78□□□□□ -1.64
VARS-222ENST00000470953 OR10H4Q8NGA5 316 aa4.78□□□□□ -1.64
VARS-222ENST00000470953 OR8B12Q8NGG6 310 aa4.78□□□□□ -1.64
VARS-222ENST00000470953 LRRC29Q8WV35 223 aa4.78□□□□□ -1.64
VARS-222ENST00000470953 PIGCQ92535 297 aa4.78□□□□□ -1.64
VARS-222ENST00000470953 MRPL48Q96GC5 212 aaKnown RBP4.78□□□□□ -1.64
VARS-222ENST00000470953 CEP19Q96LK0 163 aa4.78□□□□□ -1.64
VARS-222ENST00000470953 SIGLEC11Q96RL6 698 aa4.78□□□□□ -1.64
VARS-222ENST00000470953 AMELYQ99218 206 aa4.78□□□□□ -1.64
VARS-222ENST00000470953 DDOQ99489 341 aa4.78□□□□□ -1.64
VARS-222ENST00000470953 MNTQ99583 582 aa4.78□□□□□ -1.64
VARS-222ENST00000470953 TBX5Q99593 518 aa4.78□□□□□ -1.64
VARS-222ENST00000470953 CITED2Q99967 270 aaPredicted RBP4.78□□□□□ -1.64
VARS-222ENST00000470953 AIFM2Q9BRQ8 373 aa4.78□□□□□ -1.64
VARS-222ENST00000470953 PCGF1Q9BSM1 259 aa4.78□□□□□ -1.64
VARS-222ENST00000470953 ERVK-18Q9QC07 812 aa4.78□□□□□ -1.64
VARS-222ENST00000470953 KLHDC2Q9Y2U9 406 aa4.78□□□□□ -1.64
VARS-222ENST00000470953 IGHV3OR15-7A0A075B7D8 119 aa4.77□□□□□ -1.65
VARS-222ENST00000470953 A0A1B0GVI7 797 aa4.77□□□□□ -1.65
VARS-222ENST00000470953 A0A1B0GW55 424 aa4.77□□□□□ -1.65
VARS-222ENST00000470953 MEGF11A6BM72 1044 aa4.77□□□□□ -1.65
VARS-222ENST00000470953 CCDC182A6NF36 153 aa4.77□□□□□ -1.65
VARS-222ENST00000470953 TMEM210A6NLX4 147 aa4.77□□□□□ -1.65
VARS-222ENST00000470953 ZAR1LA6NP61 321 aa4.77□□□□□ -1.65
VARS-222ENST00000470953 ZNF850A8MQ14 1090 aa4.77□□□□□ -1.65
VARS-222ENST00000470953 EI24O14681 340 aa4.77□□□□□ -1.65
VARS-222ENST00000470953 RPP14O95059 124 aaKnown RBP4.77□□□□□ -1.65
VARS-222ENST00000470953 APOL3O95236 402 aa4.77□□□□□ -1.65
VARS-222ENST00000470953 ATP6V1G2O95670 118 aa4.77□□□□□ -1.65
VARS-222ENST00000470953 BAG2O95816 211 aa4.77□□□□□ -1.65
VARS-222ENST00000470953 DUX4L2P0CJ85 424 aa4.77□□□□□ -1.65
VARS-222ENST00000470953 DUX4L3P0CJ86 424 aa4.77□□□□□ -1.65
VARS-222ENST00000470953 DUX4L5P0CJ88 424 aa4.77□□□□□ -1.65
VARS-222ENST00000470953 DUX4L6P0CJ89 424 aa4.77□□□□□ -1.65
VARS-222ENST00000470953 DUX4L7P0CJ90 424 aa4.77□□□□□ -1.65
VARS-222ENST00000470953 ALOX5APP20292 161 aa4.77□□□□□ -1.65
VARS-222ENST00000470953 M6PRP20645 277 aa4.77□□□□□ -1.65
VARS-222ENST00000470953 SLC2A5P22732 501 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms