RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 DLEU7Q6UYE1 221 aa7.79□□□□□ -1.16
HPS4-209ENST00000466781 NUFIP2Q7Z417 695 aaKnown RBP7.79□□□□□ -1.16
HPS4-209ENST00000466781 LYSMD2Q8IV50 215 aa7.79□□□□□ -1.16
HPS4-209ENST00000466781 GPBAR1Q8TDU6 330 aa7.79□□□□□ -1.16
HPS4-209ENST00000466781 ADGRL4Q9HBW9 690 aa7.79□□□□□ -1.16
HPS4-209ENST00000466781 SERGEFQ9UGK8 458 aa7.79□□□□□ -1.16
HPS4-209ENST00000466781 A0A1W2PRD5 423 aa7.78□□□□□ -1.16
HPS4-209ENST00000466781 A0A1W2PRF3 423 aa7.78□□□□□ -1.16
HPS4-209ENST00000466781 A0A1W2PRM7 423 aa7.78□□□□□ -1.16
HPS4-209ENST00000466781 TOX3O15405 576 aaPredicted RBP7.78□□□□□ -1.16
HPS4-209ENST00000466781 FCMRO60667 390 aa7.78□□□□□ -1.16
HPS4-209ENST00000466781 GTF2H5Q6ZYL4 71 aa7.78□□□□□ -1.16
HPS4-209ENST00000466781 TIPARPQ7Z3E1 657 aaKnown RBP7.78□□□□□ -1.16
HPS4-209ENST00000466781 OR4D9Q8NGE8 314 aa7.78□□□□□ -1.16
HPS4-209ENST00000466781 CT55Q8WUE5 264 aa7.78□□□□□ -1.16
HPS4-209ENST00000466781 DUSP15Q9H1R2 295 aaPredicted RBP7.78□□□□□ -1.16
HPS4-209ENST00000466781 BCL2L10Q9HD36 194 aa7.78□□□□□ -1.16
HPS4-209ENST00000466781 ASB1Q9Y576 335 aa7.78□□□□□ -1.16
HPS4-209ENST00000466781 ZAR1LA6NP61 321 aa7.78□□□□□ -1.16
HPS4-209ENST00000466781 CD200P41217 278 aa7.78□□□□□ -1.16
HPS4-209ENST00000466781 SOX8P57073 446 aa7.78□□□□□ -1.16
HPS4-209ENST00000466781 Q3ZCU0 254 aa7.78□□□□□ -1.16
HPS4-209ENST00000466781 FAAP20Q6NZ36 180 aa7.78□□□□□ -1.16
HPS4-209ENST00000466781 KIRREL2Q6UWL6 708 aa7.78□□□□□ -1.16
HPS4-209ENST00000466781 ZNF574Q6ZN55 896 aaPredicted RBP7.78□□□□□ -1.16
HPS4-209ENST00000466781 TMEM229BQ8NBD8 167 aa7.78□□□□□ -1.16
HPS4-209ENST00000466781 OR1L3Q8NH93 324 aa7.78□□□□□ -1.16
HPS4-209ENST00000466781 TMED6Q8WW62 240 aa7.78□□□□□ -1.16
HPS4-209ENST00000466781 DOK1Q99704 481 aa7.78□□□□□ -1.16
HPS4-209ENST00000466781 CABLES2Q9BTV7 478 aa7.78□□□□□ -1.16
HPS4-209ENST00000466781 ZNF629Q9UEG4 869 aaPredicted RBP7.78□□□□□ -1.16
HPS4-209ENST00000466781 ING1Q9UK53 422 aaPredicted RBP7.78□□□□□ -1.16
HPS4-209ENST00000466781 A0A0A6YYJ9 748 aa7.78□□□□□ -1.16
HPS4-209ENST00000466781 IFITM5A6NNB3 132 aa7.78□□□□□ -1.16
HPS4-209ENST00000466781 ADAM20O43506 726 aa7.78□□□□□ -1.16
HPS4-209ENST00000466781 AGFG2O95081 481 aa7.78□□□□□ -1.16
HPS4-209ENST00000466781 CD80P33681 288 aa7.78□□□□□ -1.16
HPS4-209ENST00000466781 SSBP1Q04837 148 aaKnown RBP7.78□□□□□ -1.16
HPS4-209ENST00000466781 SLC35B4Q969S0 331 aa7.78□□□□□ -1.16
HPS4-209ENST00000466781 GLRX2Q9NS18 164 aa7.78□□□□□ -1.16
HPS4-209ENST00000466781 IL36GQ9NZH8 169 aa7.78□□□□□ -1.16
HPS4-209ENST00000466781 EPOPA6NHQ4 379 aa7.78□□□□□ -1.16
HPS4-209ENST00000466781 GPANK1O95872 356 aa7.78□□□□□ -1.16
HPS4-209ENST00000466781 CD3DP04234 171 aa7.78□□□□□ -1.16
HPS4-209ENST00000466781 NPY1RP25929 384 aa7.78□□□□□ -1.16
HPS4-209ENST00000466781 AGERQ15109 404 aa7.78□□□□□ -1.16
HPS4-209ENST00000466781 SPRED2Q7Z698 418 aa7.78□□□□□ -1.16
HPS4-209ENST00000466781 APOBEC4Q8WW27 367 aaKnown RBP7.78□□□□□ -1.16
HPS4-209ENST00000466781 DOCK5Q9H7D0 1870 aa7.78□□□□□ -1.16
HPS4-209ENST00000466781 OR2T8A6NH00 312 aa7.77□□□□□ -1.16
HPS4-209ENST00000466781 FAM157AC9JC47 383 aa7.77□□□□□ -1.16
HPS4-209ENST00000466781 KRASP01116 189 aa7.77□□□□□ -1.16
HPS4-209ENST00000466781 CDC34P49427 236 aaPredicted RBP7.77□□□□□ -1.16
HPS4-209ENST00000466781 OR2B8PP59922 312 aa7.77□□□□□ -1.16
HPS4-209ENST00000466781 PJVKQ0ZLH3 352 aa7.77□□□□□ -1.16
HPS4-209ENST00000466781 ASCL5Q7RTU5 278 aa7.77□□□□□ -1.16
HPS4-209ENST00000466781 TGIF2LXQ8IUE1 241 aa7.77□□□□□ -1.16
HPS4-209ENST00000466781 OR4A4PQ8NGN8 299 aa7.77□□□□□ -1.16
HPS4-209ENST00000466781 OR10D3Q8NH80 312 aa7.77□□□□□ -1.16
HPS4-209ENST00000466781 KTI12Q96EK9 354 aaPredicted RBP7.77□□□□□ -1.16
HPS4-209ENST00000466781 VN1R1Q9GZP7 353 aa7.77□□□□□ -1.16
HPS4-209ENST00000466781 NTN4Q9HB63 628 aa7.77□□□□□ -1.16
HPS4-209ENST00000466781 CASP8AP2Q9UKL3 1982 aa7.77□□□□□ -1.16
HPS4-209ENST00000466781 MYO10Q9HD67 2058 aa7.77□□□□□ -1.17
HPS4-209ENST00000466781 ARRDC5A6NEK1 342 aa7.77□□□□□ -1.17
HPS4-209ENST00000466781 LPAR6P43657 344 aa7.77□□□□□ -1.17
HPS4-209ENST00000466781 LIMK1P53667 647 aa7.77□□□□□ -1.17
HPS4-209ENST00000466781 FZD5Q13467 585 aa7.77□□□□□ -1.17
HPS4-209ENST00000466781 KLHDC1Q8N7A1 406 aa7.77□□□□□ -1.17
HPS4-209ENST00000466781 HGDQ93099 445 aa7.77□□□□□ -1.17
HPS4-209ENST00000466781 UBE2FQ969M7 185 aa7.77□□□□□ -1.17
HPS4-209ENST00000466781 TMEM18Q96B42 140 aa7.77□□□□□ -1.17
HPS4-209ENST00000466781 GNRHR2Q96P88 292 aa7.77□□□□□ -1.17
HPS4-209ENST00000466781 SLC45A2Q9UMX9 530 aa7.77□□□□□ -1.17
HPS4-209ENST00000466781 UFC1Q9Y3C8 167 aa7.77□□□□□ -1.17
HPS4-209ENST00000466781 C3orf80F5H4A9 247 aa7.77□□□□□ -1.17
HPS4-209ENST00000466781 SEMA7AO75326 666 aa7.77□□□□□ -1.17
HPS4-209ENST00000466781 OR2G2Q8NGZ5 317 aa7.77□□□□□ -1.17
HPS4-209ENST00000466781 OR2D2Q9H210 308 aa7.77□□□□□ -1.17
HPS4-209ENST00000466781 UQCC1Q9NVA1 299 aa7.77□□□□□ -1.17
HPS4-209ENST00000466781 IGHV3-43A0A0B4J1X8 118 aa7.77□□□□□ -1.17
HPS4-209ENST00000466781 DNPH1O43598 174 aa7.77□□□□□ -1.17
HPS4-209ENST00000466781 GFRA3O60609 400 aa7.77□□□□□ -1.17
HPS4-209ENST00000466781 GYPAP02724 150 aa7.77□□□□□ -1.17
HPS4-209ENST00000466781 MMP7P09237 267 aaPredicted RBP7.77□□□□□ -1.17
HPS4-209ENST00000466781 IGHV3-43DP0DP04 118 aa7.77□□□□□ -1.17
HPS4-209ENST00000466781 COX6B1P14854 86 aa7.77□□□□□ -1.17
HPS4-209ENST00000466781 TOMM34Q15785 309 aaPredicted RBP7.77□□□□□ -1.17
HPS4-209ENST00000466781 VAMP3Q15836 100 aa7.77□□□□□ -1.17
HPS4-209ENST00000466781 CLEC12BQ2HXU8 276 aa7.77□□□□□ -1.17
HPS4-209ENST00000466781 RNASEKQ6P5S7 137 aaKnown RBP7.77□□□□□ -1.17
HPS4-209ENST00000466781 CCDC190Q86UF4 302 aa7.77□□□□□ -1.17
HPS4-209ENST00000466781 OR1B1Q8NGR6 318 aa7.77□□□□□ -1.17
HPS4-209ENST00000466781 ZFP64Q9NPA5 681 aa7.77□□□□□ -1.17
HPS4-209ENST00000466781 OR6C3Q9NZP0 311 aa7.77□□□□□ -1.17
HPS4-209ENST00000466781 A0A1W2PPQ1 181 aa7.77□□□□□ -1.17
HPS4-209ENST00000466781 TUBAL3A6NHL2 446 aa7.77□□□□□ -1.17
HPS4-209ENST00000466781 FZD6O60353 706 aa7.77□□□□□ -1.17
HPS4-209ENST00000466781 JUNBP17275 347 aaPredicted RBP7.77□□□□□ -1.17
HPS4-209ENST00000466781 UBE2MP61081 183 aaKnown RBP7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms