RNA–Protein interactions for RNA: ENST00000435497.1

LINC00028-201, long intergenic non-protein coding RNA 28, humanhuman

TSL 2 BASIC

Gene LINC00028, Length 587 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00028-201ENST00000435497 SSX2Q16385 188 aa10.92□□□□□ -0.66
LINC00028-201ENST00000435497 TCTEX1D4Q5JR98 221 aa10.92□□□□□ -0.66
LINC00028-201ENST00000435497 TRPM8Q7Z2W7 1104 aa10.92□□□□□ -0.66
LINC00028-201ENST00000435497 CALHM1Q8IU99 346 aa10.92□□□□□ -0.66
LINC00028-201ENST00000435497 PGAM4Q8N0Y7 254 aa10.92□□□□□ -0.66
LINC00028-201ENST00000435497 ZNF454Q8N9F8 522 aa10.92□□□□□ -0.66
LINC00028-201ENST00000435497 FAM81AQ8TBF8 368 aa10.92□□□□□ -0.66
LINC00028-201ENST00000435497 RPS4Y2Q8TD47 263 aa10.92□□□□□ -0.66
LINC00028-201ENST00000435497 OR8B4Q96RC9 309 aa10.92□□□□□ -0.66
LINC00028-201ENST00000435497 NIPSNAP1Q9BPW8 284 aa10.92□□□□□ -0.66
LINC00028-201ENST00000435497 ELAC2Q9BQ52 826 aaKnown RBP10.92□□□□□ -0.66
LINC00028-201ENST00000435497 TBL2Q9Y4P3 447 aaKnown RBP10.92□□□□□ -0.66
LINC00028-201ENST00000435497 U3KQV3 271 aa10.92□□□□□ -0.66
LINC00028-201ENST00000435497 A0A0U1RQV5 110 aa10.91□□□□□ -0.66
LINC00028-201ENST00000435497 hCG_1809904A0A1W2PP81 198 aa10.91□□□□□ -0.66
LINC00028-201ENST00000435497 A0A1W2PPE2 198 aa10.91□□□□□ -0.66
LINC00028-201ENST00000435497 A0A1W2PR64 198 aa10.91□□□□□ -0.66
LINC00028-201ENST00000435497 A0A1W2PRV1 198 aa10.91□□□□□ -0.66
LINC00028-201ENST00000435497 MEX3AA1L020 520 aaKnown RBP10.91□□□□□ -0.66
LINC00028-201ENST00000435497 OR5B21A6NL26 309 aa10.91□□□□□ -0.66
LINC00028-201ENST00000435497 NOS1APO75052 506 aaPredicted RBP10.91□□□□□ -0.66
LINC00028-201ENST00000435497 IGLV3-1P01715 115 aa10.91□□□□□ -0.66
LINC00028-201ENST00000435497 TK1P04183 234 aa10.91□□□□□ -0.66
LINC00028-201ENST00000435497 ARG1P05089 322 aa10.91□□□□□ -0.66
LINC00028-201ENST00000435497 PIPP12273 146 aaPredicted RBP10.91□□□□□ -0.66
LINC00028-201ENST00000435497 ALOX5APP20292 161 aa10.91□□□□□ -0.66
LINC00028-201ENST00000435497 ATP6V1B2P21281 511 aa10.91□□□□□ -0.66
LINC00028-201ENST00000435497 ZNF626Q68DY1 528 aa10.91□□□□□ -0.66
LINC00028-201ENST00000435497 CD300LDQ6UXZ3 194 aa10.91□□□□□ -0.66
LINC00028-201ENST00000435497 CYP2R1Q6VVX0 501 aa10.91□□□□□ -0.66
LINC00028-201ENST00000435497 OR5AU1Q8NGC0 362 aa10.91□□□□□ -0.66
LINC00028-201ENST00000435497 OR11H6Q8NGC7 330 aa10.91□□□□□ -0.66
LINC00028-201ENST00000435497 C1orf21Q9H246 121 aa10.91□□□□□ -0.66
LINC00028-201ENST00000435497 MUC13Q9H3R2 512 aa10.91□□□□□ -0.66
LINC00028-201ENST00000435497 NIPAL2Q9H841 368 aa10.91□□□□□ -0.66
LINC00028-201ENST00000435497 ABCB10Q9NRK6 738 aa10.91□□□□□ -0.66
LINC00028-201ENST00000435497 FAM206AQ9NX38 181 aa10.91□□□□□ -0.66
LINC00028-201ENST00000435497 PITPNC1Q9UKF7 332 aa10.91□□□□□ -0.66
LINC00028-201ENST00000435497 TCRBV5S2A0A599 114 aa10.9□□□□□ -0.66
LINC00028-201ENST00000435497 SLC1A7O00341 560 aa10.9□□□□□ -0.66
LINC00028-201ENST00000435497 PEX14O75381 377 aa10.9□□□□□ -0.66
LINC00028-201ENST00000435497 PAICSP22234 425 aaKnown RBP10.9□□□□□ -0.66
LINC00028-201ENST00000435497 VDAC2P45880 294 aaPredicted RBP10.9□□□□□ -0.66
LINC00028-201ENST00000435497 DYNLT3P51808 116 aa10.9□□□□□ -0.66
LINC00028-201ENST00000435497 RIPPLY1Q0D2K3 151 aa10.9□□□□□ -0.66
LINC00028-201ENST00000435497 SMIM21Q3B7S5 101 aa10.9□□□□□ -0.66
LINC00028-201ENST00000435497 DEFB121Q5J5C9 76 aa10.9□□□□□ -0.66
LINC00028-201ENST00000435497 PLCXD3Q63HM9 321 aa10.9□□□□□ -0.66
LINC00028-201ENST00000435497 LCN8Q6JVE9 175 aa10.9□□□□□ -0.66
LINC00028-201ENST00000435497 PLBD1Q6P4A8 553 aa10.9□□□□□ -0.66
LINC00028-201ENST00000435497 BATF2Q8N1L9 274 aa10.9□□□□□ -0.66
LINC00028-201ENST00000435497 FOXRED1Q96CU9 486 aaPredicted RBP10.9□□□□□ -0.66
LINC00028-201ENST00000435497 TEAD3Q99594 435 aa10.9□□□□□ -0.66
LINC00028-201ENST00000435497 NRIP2Q9BQI9 281 aa10.9□□□□□ -0.66
LINC00028-201ENST00000435497 HES4Q9HCC6 221 aa10.9□□□□□ -0.66
LINC00028-201ENST00000435497 SAMHD1Q9Y3Z3 626 aaKnown RBP10.9□□□□□ -0.66
LINC00028-201ENST00000435497 ACOD1A6NK06 481 aa10.89□□□□□ -0.67
LINC00028-201ENST00000435497 FAM90A22PA8MWA6 464 aa10.89□□□□□ -0.67
LINC00028-201ENST00000435497 PRR32B1ATL7 298 aa10.89□□□□□ -0.67
LINC00028-201ENST00000435497 PRR23D1E9PI22 279 aaPredicted RBP10.89□□□□□ -0.67
LINC00028-201ENST00000435497 K7N7A8 449 aa10.89□□□□□ -0.67
LINC00028-201ENST00000435497 PSMD9O00233 223 aa10.89□□□□□ -0.67
LINC00028-201ENST00000435497 ZNF728P0DKX0 622 aa10.89□□□□□ -0.67
LINC00028-201ENST00000435497 PRR23D2P0DMB1 279 aaPredicted RBP10.89□□□□□ -0.67
LINC00028-201ENST00000435497 ATP6V1B1P15313 513 aa10.89□□□□□ -0.67
LINC00028-201ENST00000435497 HAAOP46952 286 aa10.89□□□□□ -0.67
LINC00028-201ENST00000435497 OR2T5Q6IEZ7 315 aa10.89□□□□□ -0.67
LINC00028-201ENST00000435497 KRT77Q7Z794 578 aa10.89□□□□□ -0.67
LINC00028-201ENST00000435497 BBS1Q8NFJ9 593 aa10.89□□□□□ -0.67
LINC00028-201ENST00000435497 OR13D1Q8NGV5 346 aa10.89□□□□□ -0.67
LINC00028-201ENST00000435497 OR2T29Q8NH02 315 aa10.89□□□□□ -0.67
LINC00028-201ENST00000435497 TEX47Q8TBZ9 253 aa10.89□□□□□ -0.67
LINC00028-201ENST00000435497 OR51E1Q8TCB6 317 aa10.89□□□□□ -0.67
LINC00028-201ENST00000435497 ITFG2Q969R8 447 aa10.89□□□□□ -0.67
LINC00028-201ENST00000435497 PBOV1Q9GZY1 135 aa10.89□□□□□ -0.67
LINC00028-201ENST00000435497 GPR84Q9NQS5 396 aa10.89□□□□□ -0.67
LINC00028-201ENST00000435497 ACTR3BQ9P1U1 418 aa10.89□□□□□ -0.67
LINC00028-201ENST00000435497 OR14J1Q9UGF5 321 aa10.89□□□□□ -0.67
LINC00028-201ENST00000435497 PIGLQ9Y2B2 252 aa10.89□□□□□ -0.67
LINC00028-201ENST00000435497 KIAA2026Q5HYC2 2103 aa10.88□□□□□ -0.67
LINC00028-201ENST00000435497 TMEM269A0A1B0GVZ9 245 aa10.88□□□□□ -0.67
LINC00028-201ENST00000435497 J3QT63 122 aa10.88□□□□□ -0.67
LINC00028-201ENST00000435497 NXPH2O95156 264 aa10.88□□□□□ -0.67
LINC00028-201ENST00000435497 NRASP01111 189 aa10.88□□□□□ -0.67
LINC00028-201ENST00000435497 IGHV1-8P0DP01 117 aa10.88□□□□□ -0.67
LINC00028-201ENST00000435497 SLC2A5P22732 501 aa10.88□□□□□ -0.67
LINC00028-201ENST00000435497 ERVK11-1P61568 191 aa10.88□□□□□ -0.67
LINC00028-201ENST00000435497 GINS1Q14691 196 aa10.88□□□□□ -0.67
LINC00028-201ENST00000435497 ARSJQ5FYB0 599 aaPredicted RBP10.88□□□□□ -0.67
LINC00028-201ENST00000435497 TMEM42Q69YG0 159 aa10.88□□□□□ -0.67
LINC00028-201ENST00000435497 CCDC121Q6ZUS5 278 aa10.88□□□□□ -0.67
LINC00028-201ENST00000435497 TCF23Q7RTU1 214 aa10.88□□□□□ -0.67
LINC00028-201ENST00000435497 CPOQ8IVL8 374 aa10.88□□□□□ -0.67
LINC00028-201ENST00000435497 DEFB107AQ8IZN7 70 aa10.88□□□□□ -0.67
LINC00028-201ENST00000435497 OR10G2Q8NGC3 310 aa10.88□□□□□ -0.67
LINC00028-201ENST00000435497 FEVQ99581 238 aa10.88□□□□□ -0.67
LINC00028-201ENST00000435497 FAM107BQ9H098 131 aa10.88□□□□□ -0.67
LINC00028-201ENST00000435497 REEP1Q9H902 201 aa10.88□□□□□ -0.67
LINC00028-201ENST00000435497 INPP5EQ9NRR6 644 aa10.88□□□□□ -0.67
LINC00028-201ENST00000435497 ARL8BQ9NVJ2 186 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms