RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 FAHP16930 419 aa12.35□□□□□ -0.43
CHMP3-202ENST00000393773 JUNBP17275 347 aaPredicted RBP12.35□□□□□ -0.43
CHMP3-202ENST00000393773 VDAC2P45880 294 aaPredicted RBP12.35□□□□□ -0.43
CHMP3-202ENST00000393773 MAP2K3P46734 347 aa12.35□□□□□ -0.43
CHMP3-202ENST00000393773 DYNLT3P51808 116 aa12.35□□□□□ -0.43
CHMP3-202ENST00000393773 CD83Q01151 205 aa12.35□□□□□ -0.43
CHMP3-202ENST00000393773 CALHM1Q8IU99 346 aa12.35□□□□□ -0.43
CHMP3-202ENST00000393773 OR5A2Q8NGI9 324 aa12.35□□□□□ -0.43
CHMP3-202ENST00000393773 OR2T27Q8NH04 317 aa12.35□□□□□ -0.43
CHMP3-202ENST00000393773 TEX47Q8TBZ9 253 aa12.35□□□□□ -0.43
CHMP3-202ENST00000393773 OTULINQ96BN8 352 aa12.35□□□□□ -0.43
CHMP3-202ENST00000393773 OR8B4Q96RC9 309 aa12.35□□□□□ -0.43
CHMP3-202ENST00000393773 NIPSNAP1Q9BPW8 284 aa12.35□□□□□ -0.43
CHMP3-202ENST00000393773 MUC13Q9H3R2 512 aa12.35□□□□□ -0.43
CHMP3-202ENST00000393773 ABCB10Q9NRK6 738 aa12.35□□□□□ -0.43
CHMP3-202ENST00000393773 FAM206AQ9NX38 181 aa12.35□□□□□ -0.43
CHMP3-202ENST00000393773 DYNC2H1Q8NCM8 4307 aaKnown RBP12.35□□□□□ -0.43
CHMP3-202ENST00000393773 WI2-2373I1.2A0A1W2PRP0 233 aa12.34□□□□□ -0.43
CHMP3-202ENST00000393773 TCRBV5S2A0A599 114 aa12.34□□□□□ -0.43
CHMP3-202ENST00000393773 J3QT63 122 aa12.34□□□□□ -0.43
CHMP3-202ENST00000393773 PEX14O75381 377 aa12.34□□□□□ -0.43
CHMP3-202ENST00000393773 RBP4P02753 201 aa12.34□□□□□ -0.43
CHMP3-202ENST00000393773 VSIG8P0DPA2 414 aa12.34□□□□□ -0.43
CHMP3-202ENST00000393773 PIPP12273 146 aaPredicted RBP12.34□□□□□ -0.43
CHMP3-202ENST00000393773 PRDX2P32119 198 aa12.34□□□□□ -0.43
CHMP3-202ENST00000393773 KRTAP10-11P60412 298 aa12.34□□□□□ -0.43
CHMP3-202ENST00000393773 BLCAPP62952 87 aa12.34□□□□□ -0.43
CHMP3-202ENST00000393773 SSX2Q16385 188 aa12.34□□□□□ -0.43
CHMP3-202ENST00000393773 MICAQ29983 383 aa12.34□□□□□ -0.43
CHMP3-202ENST00000393773 TCTEX1D4Q5JR98 221 aa12.34□□□□□ -0.43
CHMP3-202ENST00000393773 PLCXD3Q63HM9 321 aa12.34□□□□□ -0.43
CHMP3-202ENST00000393773 CD300LDQ6UXZ3 194 aa12.34□□□□□ -0.43
CHMP3-202ENST00000393773 TCF23Q7RTU1 214 aa12.34□□□□□ -0.43
CHMP3-202ENST00000393773 OR11H6Q8NGC7 330 aa12.34□□□□□ -0.43
CHMP3-202ENST00000393773 THEM6Q8WUY1 208 aa12.34□□□□□ -0.43
CHMP3-202ENST00000393773 MALSU1Q96EH3 234 aa12.34□□□□□ -0.43
CHMP3-202ENST00000393773 CDRT15Q96T59 188 aa12.34□□□□□ -0.43
CHMP3-202ENST00000393773 NRIP2Q9BQI9 281 aa12.34□□□□□ -0.43
CHMP3-202ENST00000393773 OCSTAMPQ9BR26 566 aa12.34□□□□□ -0.43
CHMP3-202ENST00000393773 C1orf21Q9H246 121 aa12.34□□□□□ -0.43
CHMP3-202ENST00000393773 OR51V1Q9H2C8 321 aa12.34□□□□□ -0.43
CHMP3-202ENST00000393773 HES4Q9HCC6 221 aa12.34□□□□□ -0.43
CHMP3-202ENST00000393773 U3KQV3 271 aa12.34□□□□□ -0.43
CHMP3-202ENST00000393773 RYR2Q92736 4967 aa12.33□□□□□ -0.43
CHMP3-202ENST00000393773 NOS1APO75052 506 aaPredicted RBP12.33□□□□□ -0.44
CHMP3-202ENST00000393773 TK1P04183 234 aa12.33□□□□□ -0.44
CHMP3-202ENST00000393773 PF4V1P10720 104 aa12.33□□□□□ -0.44
CHMP3-202ENST00000393773 SLC35A2P78381 396 aa12.33□□□□□ -0.44
CHMP3-202ENST00000393773 ARSJQ5FYB0 599 aaPredicted RBP12.33□□□□□ -0.44
CHMP3-202ENST00000393773 LCN8Q6JVE9 175 aa12.33□□□□□ -0.44
CHMP3-202ENST00000393773 PLBD1Q6P4A8 553 aa12.33□□□□□ -0.44
CHMP3-202ENST00000393773 CYP2R1Q6VVX0 501 aa12.33□□□□□ -0.44
CHMP3-202ENST00000393773 MOB3CQ70IA8 216 aa12.33□□□□□ -0.44
CHMP3-202ENST00000393773 BATF2Q8N1L9 274 aa12.33□□□□□ -0.44
CHMP3-202ENST00000393773 OR13D1Q8NGV5 346 aa12.33□□□□□ -0.44
CHMP3-202ENST00000393773 SAMHD1Q9Y3Z3 626 aaKnown RBP12.33□□□□□ -0.44
CHMP3-202ENST00000393773 DNAH7Q8WXX0 4024 aa12.33□□□□□ -0.44
CHMP3-202ENST00000393773 PRR32B1ATL7 298 aa12.32□□□□□ -0.44
CHMP3-202ENST00000393773 F2RL2O00254 374 aa12.32□□□□□ -0.44
CHMP3-202ENST00000393773 PRODHO43272 600 aa12.32□□□□□ -0.44
CHMP3-202ENST00000393773 ALDOBP05062 364 aa12.32□□□□□ -0.44
CHMP3-202ENST00000393773 IGHV1-8P0DP01 117 aa12.32□□□□□ -0.44
CHMP3-202ENST00000393773 ATP6V1B1P15313 513 aa12.32□□□□□ -0.44
CHMP3-202ENST00000393773 ALOX5APP20292 161 aa12.32□□□□□ -0.44
CHMP3-202ENST00000393773 MPZP25189 248 aa12.32□□□□□ -0.44
CHMP3-202ENST00000393773 HAAOP46952 286 aa12.32□□□□□ -0.44
CHMP3-202ENST00000393773 EGFEM1PQ0D2K5 195 aa12.32□□□□□ -0.44
CHMP3-202ENST00000393773 BBS1Q8NFJ9 593 aa12.32□□□□□ -0.44
CHMP3-202ENST00000393773 OR5AU1Q8NGC0 362 aa12.32□□□□□ -0.44
CHMP3-202ENST00000393773 OR10G2Q8NGC3 310 aa12.32□□□□□ -0.44
CHMP3-202ENST00000393773 ITFG2Q969R8 447 aa12.32□□□□□ -0.44
CHMP3-202ENST00000393773 RCC1LQ96I51 464 aaKnown RBP12.32□□□□□ -0.44
CHMP3-202ENST00000393773 REEP1Q9H902 201 aa12.32□□□□□ -0.44
CHMP3-202ENST00000393773 GPR84Q9NQS5 396 aa12.32□□□□□ -0.44
CHMP3-202ENST00000393773 OR14J1Q9UGF5 321 aa12.32□□□□□ -0.44
CHMP3-202ENST00000393773 PIGLQ9Y2B2 252 aa12.32□□□□□ -0.44
CHMP3-202ENST00000393773 STAB2Q8WWQ8 2551 aa12.32□□□□□ -0.44
CHMP3-202ENST00000393773 PQLC2LA1A4F0 135 aa12.31□□□□□ -0.44
CHMP3-202ENST00000393773 MEX3AA1L020 520 aaKnown RBP12.31□□□□□ -0.44
CHMP3-202ENST00000393773 ACOD1A6NK06 481 aa12.31□□□□□ -0.44
CHMP3-202ENST00000393773 PRR23D1E9PI22 279 aaPredicted RBP12.31□□□□□ -0.44
CHMP3-202ENST00000393773 H3BN98 237 aa12.31□□□□□ -0.44
CHMP3-202ENST00000393773 K7N7A8 449 aa12.31□□□□□ -0.44
CHMP3-202ENST00000393773 ZNF737O75373 536 aa12.31□□□□□ -0.44
CHMP3-202ENST00000393773 NXPH2O95156 264 aa12.31□□□□□ -0.44
CHMP3-202ENST00000393773 ZNF728P0DKX0 622 aa12.31□□□□□ -0.44
CHMP3-202ENST00000393773 PRR23D2P0DMB1 279 aaPredicted RBP12.31□□□□□ -0.44
CHMP3-202ENST00000393773 SLC2A5P22732 501 aa12.31□□□□□ -0.44
CHMP3-202ENST00000393773 AZGP1P25311 298 aaKnown RBP12.31□□□□□ -0.44
CHMP3-202ENST00000393773 MFGE8Q08431 387 aaPredicted RBP12.31□□□□□ -0.44
CHMP3-202ENST00000393773 RIPPLY1Q0D2K3 151 aa12.31□□□□□ -0.44
CHMP3-202ENST00000393773 SPATS1Q496A3 300 aa12.31□□□□□ -0.44
CHMP3-202ENST00000393773 TMEM42Q69YG0 159 aa12.31□□□□□ -0.44
CHMP3-202ENST00000393773 OR2T5Q6IEZ7 315 aa12.31□□□□□ -0.44
CHMP3-202ENST00000393773 KRT77Q7Z794 578 aa12.31□□□□□ -0.44
CHMP3-202ENST00000393773 COMMD2Q86X83 199 aa12.31□□□□□ -0.44
CHMP3-202ENST00000393773 OR2T29Q8NH02 315 aa12.31□□□□□ -0.44
CHMP3-202ENST00000393773 OR51E1Q8TCB6 317 aa12.31□□□□□ -0.44
CHMP3-202ENST00000393773 TEAD3Q99594 435 aa12.31□□□□□ -0.44
CHMP3-202ENST00000393773 PBOV1Q9GZY1 135 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms