RNA–Protein interactions for RNA: ENST00000366746.7

MRPL55-217, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-217ENST00000366746 POC1AQ8NBT0 407 aa13.5□□□□□ -0.25
MRPL55-217ENST00000366746 OR10G2Q8NGC3 310 aa13.5□□□□□ -0.25
MRPL55-217ENST00000366746 FOXRED1Q96CU9 486 aaPredicted RBP13.5□□□□□ -0.25
MRPL55-217ENST00000366746 MALSU1Q96EH3 234 aa13.5□□□□□ -0.25
MRPL55-217ENST00000366746 NIPSNAP1Q9BPW8 284 aa13.5□□□□□ -0.25
MRPL55-217ENST00000366746 FAM107BQ9H098 131 aa13.5□□□□□ -0.25
MRPL55-217ENST00000366746 MAGIXQ9H6Y5 334 aa13.5□□□□□ -0.25
MRPL55-217ENST00000366746 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.5□□□□□ -0.25
MRPL55-217ENST00000366746 TAGLN3Q9UI15 199 aa13.5□□□□□ -0.25
MRPL55-217ENST00000366746 LAMP5Q9UJQ1 280 aa13.5□□□□□ -0.25
MRPL55-217ENST00000366746 PLXNB1O43157 2135 aa13.49□□□□□ -0.25
MRPL55-217ENST00000366746 TMEM269A0A1B0GVZ9 245 aa13.49□□□□□ -0.25
MRPL55-217ENST00000366746 A6NDX4 124 aa13.49□□□□□ -0.25
MRPL55-217ENST00000366746 NXPH2O95156 264 aa13.49□□□□□ -0.25
MRPL55-217ENST00000366746 ATP6V1B2P21281 511 aa13.49□□□□□ -0.25
MRPL55-217ENST00000366746 SSX2Q16385 188 aa13.49□□□□□ -0.25
MRPL55-217ENST00000366746 FAM98BQ52LJ0 330 aaKnown RBP13.49□□□□□ -0.25
MRPL55-217ENST00000366746 VAX1Q5SQQ9 334 aa13.49□□□□□ -0.25
MRPL55-217ENST00000366746 ZNF573Q86YE8 665 aa13.49□□□□□ -0.25
MRPL55-217ENST00000366746 DYNAPQ8N1N2 210 aa13.49□□□□□ -0.25
MRPL55-217ENST00000366746 OR13D1Q8NGV5 346 aa13.49□□□□□ -0.25
MRPL55-217ENST00000366746 ZNF488Q96MN9 340 aa13.49□□□□□ -0.25
MRPL55-217ENST00000366746 FEVQ99581 238 aa13.49□□□□□ -0.25
MRPL55-217ENST00000366746 ZNF446Q9NWS9 450 aa13.49□□□□□ -0.25
MRPL55-217ENST00000366746 VNN3Q9NY84 501 aa13.49□□□□□ -0.25
MRPL55-217ENST00000366746 TAS2R1Q9NYW7 299 aa13.49□□□□□ -0.25
MRPL55-217ENST00000366746 ENPP5Q9UJA9 477 aa13.49□□□□□ -0.25
MRPL55-217ENST00000366746 PIGLQ9Y2B2 252 aa13.49□□□□□ -0.25
MRPL55-217ENST00000366746 KLHDC2Q9Y2U9 406 aa13.49□□□□□ -0.25
MRPL55-217ENST00000366746 TBL2Q9Y4P3 447 aaKnown RBP13.49□□□□□ -0.25
MRPL55-217ENST00000366746 ADARB2-AS1A8MUL3 147 aa13.48□□□□□ -0.25
MRPL55-217ENST00000366746 H3BUI4 141 aa13.48□□□□□ -0.25
MRPL55-217ENST00000366746 PRODHO43272 600 aa13.48□□□□□ -0.25
MRPL55-217ENST00000366746 MPIG6BO95866 241 aa13.48□□□□□ -0.25
MRPL55-217ENST00000366746 NRASP01111 189 aa13.48□□□□□ -0.25
MRPL55-217ENST00000366746 TK1P04183 234 aa13.48□□□□□ -0.25
MRPL55-217ENST00000366746 HMGN1P05114 100 aa13.48□□□□□ -0.25
MRPL55-217ENST00000366746 PIPP12273 146 aaPredicted RBP13.48□□□□□ -0.25
MRPL55-217ENST00000366746 ALOX5APP20292 161 aa13.48□□□□□ -0.25
MRPL55-217ENST00000366746 HAAOP46952 286 aa13.48□□□□□ -0.25
MRPL55-217ENST00000366746 CEBPDP49716 269 aaPredicted RBP13.48□□□□□ -0.25
MRPL55-217ENST00000366746 RPS7P62081 194 aaKnown RBP13.48□□□□□ -0.25
MRPL55-217ENST00000366746 ZNF273Q14593 569 aa13.48□□□□□ -0.25
MRPL55-217ENST00000366746 ZNF684Q5T5D7 378 aa13.48□□□□□ -0.25
MRPL55-217ENST00000366746 KCTD18Q6PI47 426 aaPredicted RBP13.48□□□□□ -0.25
MRPL55-217ENST00000366746 TRPM8Q7Z2W7 1104 aa13.48□□□□□ -0.25
MRPL55-217ENST00000366746 OR51E1Q8TCB6 317 aa13.48□□□□□ -0.25
MRPL55-217ENST00000366746 GIPC3Q8TF64 312 aa13.48□□□□□ -0.25
MRPL55-217ENST00000366746 WIPF2Q8TF74 440 aaPredicted RBP13.48□□□□□ -0.25
MRPL55-217ENST00000366746 WNT10AQ9GZT5 417 aa13.48□□□□□ -0.25
MRPL55-217ENST00000366746 OR14J1Q9UGF5 321 aa13.48□□□□□ -0.25
MRPL55-217ENST00000366746 POLDIP2Q9Y2S7 368 aa13.48□□□□□ -0.25
MRPL55-217ENST00000366746 TCRBV5S2A0A599 114 aa13.47□□□□□ -0.25
MRPL55-217ENST00000366746 C17orf98A8MV24 154 aa13.47□□□□□ -0.25
MRPL55-217ENST00000366746 J3QT63 122 aa13.47□□□□□ -0.25
MRPL55-217ENST00000366746 SYNGR1O43759 233 aa13.47□□□□□ -0.25
MRPL55-217ENST00000366746 SNX3O60493 162 aa13.47□□□□□ -0.25
MRPL55-217ENST00000366746 NOS1APO75052 506 aaPredicted RBP13.47□□□□□ -0.25
MRPL55-217ENST00000366746 ALDOBP05062 364 aa13.47□□□□□ -0.25
MRPL55-217ENST00000366746 PGA5P0DJD9 388 aa13.47□□□□□ -0.25
MRPL55-217ENST00000366746 IGLL1P15814 213 aa13.47□□□□□ -0.25
MRPL55-217ENST00000366746 VDAC2P45880 294 aaPredicted RBP13.47□□□□□ -0.25
MRPL55-217ENST00000366746 HCCSP53701 268 aa13.47□□□□□ -0.25
MRPL55-217ENST00000366746 OR12D2P58182 307 aa13.47□□□□□ -0.25
MRPL55-217ENST00000366746 DYNC1I2Q13409 638 aaKnown RBP13.47□□□□□ -0.25
MRPL55-217ENST00000366746 GINS1Q14691 196 aa13.47□□□□□ -0.25
MRPL55-217ENST00000366746 SLC35D3Q5M8T2 416 aa13.47□□□□□ -0.25
MRPL55-217ENST00000366746 LCN8Q6JVE9 175 aa13.47□□□□□ -0.25
MRPL55-217ENST00000366746 DEGS2Q6QHC5 323 aa13.47□□□□□ -0.25
MRPL55-217ENST00000366746 DHFR2Q86XF0 187 aa13.47□□□□□ -0.25
MRPL55-217ENST00000366746 CPOQ8IVL8 374 aa13.47□□□□□ -0.25
MRPL55-217ENST00000366746 WFDC9Q8NEX5 89 aa13.47□□□□□ -0.25
MRPL55-217ENST00000366746 MROQ9BYG7 248 aa13.47□□□□□ -0.25
MRPL55-217ENST00000366746 PBOV1Q9GZY1 135 aa13.47□□□□□ -0.25
MRPL55-217ENST00000366746 MED4Q9NPJ6 270 aa13.47□□□□□ -0.25
MRPL55-217ENST00000366746 GPR84Q9NQS5 396 aa13.47□□□□□ -0.25
MRPL55-217ENST00000366746 ARL8BQ9NVJ2 186 aa13.47□□□□□ -0.25
MRPL55-217ENST00000366746 FAM206AQ9NX38 181 aa13.47□□□□□ -0.25
MRPL55-217ENST00000366746 A0A1W2PRX2 142 aa13.46□□□□□ -0.25
MRPL55-217ENST00000366746 PSMD9O00233 223 aa13.46□□□□□ -0.25
MRPL55-217ENST00000366746 ZNF728P0DKX0 622 aa13.46□□□□□ -0.25
MRPL55-217ENST00000366746 PF4V1P10720 104 aa13.46□□□□□ -0.25
MRPL55-217ENST00000366746 BLCAPP62952 87 aa13.46□□□□□ -0.25
MRPL55-217ENST00000366746 GK3PQ14409 553 aa13.46□□□□□ -0.25
MRPL55-217ENST00000366746 LCN1P1Q5VSP4 162 aa13.46□□□□□ -0.25
MRPL55-217ENST00000366746 OR5AU1Q8NGC0 362 aa13.46□□□□□ -0.25
MRPL55-217ENST00000366746 OR11H6Q8NGC7 330 aa13.46□□□□□ -0.25
MRPL55-217ENST00000366746 OR8B4Q96RC9 309 aa13.46□□□□□ -0.25
MRPL55-217ENST00000366746 TEAD3Q99594 435 aa13.46□□□□□ -0.25
MRPL55-217ENST00000366746 NRIP2Q9BQI9 281 aa13.46□□□□□ -0.25
MRPL55-217ENST00000366746 YIPF3Q9GZM5 350 aa13.46□□□□□ -0.25
MRPL55-217ENST00000366746 ODF3BA8MYP8 253 aa13.45□□□□□ -0.26
MRPL55-217ENST00000366746 K7N7A8 449 aa13.45□□□□□ -0.26
MRPL55-217ENST00000366746 F2RL2O00254 374 aa13.45□□□□□ -0.26
MRPL55-217ENST00000366746 ZNF254O75437 659 aa13.45□□□□□ -0.26
MRPL55-217ENST00000366746 DHRS3O75911 302 aa13.45□□□□□ -0.26
MRPL55-217ENST00000366746 DYNLT3P51808 116 aa13.45□□□□□ -0.26
MRPL55-217ENST00000366746 MNAT1P51948 309 aa13.45□□□□□ -0.26
MRPL55-217ENST00000366746 DLX6P56179 175 aa13.45□□□□□ -0.26
MRPL55-217ENST00000366746 ESRRGP62508 458 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms