RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 ZNF883P0CG24 379 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 FAHP16930 419 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 EPHA2P29317 976 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 ID1P41134 155 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 PTGIRP43119 386 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 XCR1P46094 333 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 OR7A5Q15622 319 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 ELAVL1Q15717 326 aaKnown RBP2.96□□□□□ -1.94
CSMD3-202ENST00000339701 Q3ZCU0 254 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 DNLZQ5SXM8 178 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 OGFOD3Q6PK18 319 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 OR11G2Q8NGC1 345 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 OR10Z1Q8NGY1 313 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 TNFRSF14Q92956 283 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 TNFRSF13CQ96RJ3 184 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 TNFRSF19Q9NS68 423 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 GOLT1BQ9Y3E0 138 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 ANKHD1Q8IWZ3 2542 aaKnown RBP2.96□□□□□ -1.94
CSMD3-202ENST00000339701 C17orf51A8MQB3 221 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 ANKRD65E5RJM6 399 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 F2RL2O00254 374 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 XRCC3O43542 346 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 NRASP01111 189 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 ARAFP10398 606 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 COX5BP10606 129 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 VDAC1P21796 283 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 KIR2DL1P43626 348 aaPredicted RBP2.96□□□□□ -1.94
CSMD3-202ENST00000339701 KIR2DL2P43627 348 aaPredicted RBP2.96□□□□□ -1.94
CSMD3-202ENST00000339701 GDF10P55107 478 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 RHOBP62745 196 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 RNPS1Q15287 305 aaKnown RBP2.96□□□□□ -1.94
CSMD3-202ENST00000339701 EEF1AKMT2Q5JPI9 291 aaKnown RBP2.96□□□□□ -1.94
CSMD3-202ENST00000339701 OR4F3Q6IEY1 312 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 PARS2Q7L3T8 475 aaKnown RBP2.96□□□□□ -1.94
CSMD3-202ENST00000339701 CALHM3Q86XJ0 350 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 D2HGDHQ8N465 521 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 OR5A2Q8NGI9 324 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 FBXO17Q96EF6 278 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 TAAR6Q96RI8 345 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 OPN3Q9H1Y3 402 aaPredicted RBP2.96□□□□□ -1.94
CSMD3-202ENST00000339701 SIRT5Q9NXA8 310 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 LAMTOR3Q9UHA4 124 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 AQP7P3A6NL99 342 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 ZNF785A8K8V0 405 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 LANCL1O43813 399 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 GABRR1P24046 479 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 HTR1DP28221 377 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 OR1D4P47884 311 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 PRLHRP49683 370 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 GZMKP49863 264 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 RBP2P50120 134 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 METAP1P53582 386 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 MFAP5Q13361 173 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 GPR18Q14330 331 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 SLC25A35Q3KQZ1 300 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 SPANXN4Q5MJ08 99 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 OR4C11Q6IEV9 310 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 PAQR3Q6TCH7 311 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 DHRS11Q6UWP2 260 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 LYG2Q86SG7 212 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 C20orf196Q8IYI0 205 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 OR2T6Q8NHC8 308 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 RSRP1Q9BUV0 290 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 OR2S2Q9NQN1 319 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 NKX1-2Q9UD57 310 aaPredicted RBP2.96□□□□□ -1.94
CSMD3-202ENST00000339701 HMX2A2RU54 273 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 CTDSP2O14595 271 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 CRHP06850 196 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 SRD5A1P18405 259 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 SLC6A1P30531 599 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 PAX5Q02548 391 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 TESK1Q15569 626 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 VAMP3Q15836 100 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 HIST3H3Q16695 136 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 ANKRD55Q3KP44 614 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 PMS2CLQ68D20 193 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 RXFP4Q8TDU9 374 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 ROBO4Q8WZ75 1007 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 TMEM106AQ96A25 262 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 NRIP2Q9BQI9 281 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 SPXQ9BT56 116 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 C12orf49Q9H741 205 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 SLC25A19Q9HC21 320 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 IL17BQ9UHF5 180 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 SARDHQ9UL12 918 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 HRH3Q9Y5N1 445 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 TTC28Q96AY4 2481 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 TRAV18A0A075B6X5 111 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 G3V3Y1 287 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 FURINP09958 794 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 OR8U8P0C7N1 319 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 SLC35E2BP0CK96 405 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 SLC35E2P0CK97 266 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 SHEQ5VZ18 495 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 FBXL22Q6P050 247 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 CLEC20AQ6ZU45 233 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 SPATC1Q76KD6 591 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 CMC1Q7Z7K0 106 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 SYT9Q86SS6 491 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 OR4C16Q8NGL9 310 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms