RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 FAUP35544 74 aaKnown RBP16.08■□□□□ 0.16
EXOSC3-201ENST00000327304 ACTBP60709 375 aa16.08■□□□□ 0.16
EXOSC3-201ENST00000327304 ACTG1P63261 375 aa16.08■□□□□ 0.16
EXOSC3-201ENST00000327304 MALLQ13021 153 aa16.08■□□□□ 0.16
EXOSC3-201ENST00000327304 GK2Q14410 553 aaPredicted RBP16.08■□□□□ 0.16
EXOSC3-201ENST00000327304 MOGAT2Q3SYC2 334 aa16.08■□□□□ 0.16
EXOSC3-201ENST00000327304 ZNF260Q3ZCT1 412 aa16.08■□□□□ 0.16
EXOSC3-201ENST00000327304 ACBD4Q8NC06 268 aa16.08■□□□□ 0.16
EXOSC3-201ENST00000327304 OR1J1Q8NGS3 322 aa16.08■□□□□ 0.16
EXOSC3-201ENST00000327304 AQP3Q92482 292 aa16.08■□□□□ 0.16
EXOSC3-201ENST00000327304 SEH1LQ96EE3 360 aa16.08■□□□□ 0.16
EXOSC3-201ENST00000327304 REPIN1Q9BWE0 567 aaKnown RBP16.08■□□□□ 0.16
EXOSC3-201ENST00000327304 LPAR5Q9H1C0 372 aa16.08■□□□□ 0.16
EXOSC3-201ENST00000327304 MRPL15Q9P015 296 aaKnown RBP16.08■□□□□ 0.16
EXOSC3-201ENST00000327304 ZNF107Q9UII5 783 aaPredicted RBP16.08■□□□□ 0.16
EXOSC3-201ENST00000327304 LRRK2Q5S007 2527 aa16.07■□□□□ 0.16
EXOSC3-201ENST00000327304 ZNF816-ZNF321PA0A0X1KG74 233 aa16.07■□□□□ 0.16
EXOSC3-201ENST00000327304 J3QW42 95 aa16.07■□□□□ 0.16
EXOSC3-201ENST00000327304 ABCD4O14678 606 aa16.07■□□□□ 0.16
EXOSC3-201ENST00000327304 DHFRP00374 187 aa16.07■□□□□ 0.16
EXOSC3-201ENST00000327304 NRASP01111 189 aa16.07■□□□□ 0.16
EXOSC3-201ENST00000327304 MELTFP08582 738 aa16.07■□□□□ 0.16
EXOSC3-201ENST00000327304 PCGF3Q3KNV8 242 aa16.07■□□□□ 0.16
EXOSC3-201ENST00000327304 LHFPL2Q6ZUX7 228 aa16.07■□□□□ 0.16
EXOSC3-201ENST00000327304 BTN2A1Q7KYR7 527 aa16.07■□□□□ 0.16
EXOSC3-201ENST00000327304 OR5L1Q8NGL2 311 aa16.07■□□□□ 0.16
EXOSC3-201ENST00000327304 RADILQ96JH8 1075 aa16.07■□□□□ 0.16
EXOSC3-201ENST00000327304 GAL3ST1Q99999 423 aa16.07■□□□□ 0.16
EXOSC3-201ENST00000327304 URM1Q9BTM9 101 aaKnown RBP16.07■□□□□ 0.16
EXOSC3-201ENST00000327304 OR2J1Q9GZK6 312 aa16.07■□□□□ 0.16
EXOSC3-201ENST00000327304 SIAH2O43255 324 aa16.06■□□□□ 0.16
EXOSC3-201ENST00000327304 RAD52P43351 418 aa16.06■□□□□ 0.16
EXOSC3-201ENST00000327304 GUCA2AQ02747 115 aa16.06■□□□□ 0.16
EXOSC3-201ENST00000327304 PIAS4Q8N2W9 510 aaPredicted RBP16.06■□□□□ 0.16
EXOSC3-201ENST00000327304 OR10R2Q8NGX6 335 aa16.06■□□□□ 0.16
EXOSC3-201ENST00000327304 SLC25A40Q8TBP6 338 aa16.06■□□□□ 0.16
EXOSC3-201ENST00000327304 UBASH3BQ8TF42 649 aa16.06■□□□□ 0.16
EXOSC3-201ENST00000327304 NPRL2Q8WTW4 380 aa16.06■□□□□ 0.16
EXOSC3-201ENST00000327304 TNFAIP8L1Q8WVP5 186 aa16.06■□□□□ 0.16
EXOSC3-201ENST00000327304 PIGTQ969N2 578 aa16.06■□□□□ 0.16
EXOSC3-201ENST00000327304 PLPPR2Q96GM1 343 aa16.06■□□□□ 0.16
EXOSC3-201ENST00000327304 S100A13Q99584 98 aa16.06■□□□□ 0.16
EXOSC3-201ENST00000327304 TMEM59Q9BXS4 323 aa16.06■□□□□ 0.16
EXOSC3-201ENST00000327304 CRIM1Q9NZV1 1036 aa16.06■□□□□ 0.16
EXOSC3-201ENST00000327304 KCNN3Q9UGI6 736 aa16.06■□□□□ 0.16
EXOSC3-201ENST00000327304 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.05■□□□□ 0.16
EXOSC3-201ENST00000327304 J3QKU1 62 aa16.05■□□□□ 0.16
EXOSC3-201ENST00000327304 NKX6-1P78426 367 aaPredicted RBP16.05■□□□□ 0.16
EXOSC3-201ENST00000327304 CD300CQ08708 224 aa16.05■□□□□ 0.16
EXOSC3-201ENST00000327304 NCMAPQ5T1S8 102 aa16.05■□□□□ 0.16
EXOSC3-201ENST00000327304 MRPL21Q7Z2W9 205 aaKnown RBP16.05■□□□□ 0.16
EXOSC3-201ENST00000327304 DRAXINQ8NBI3 349 aaPredicted RBP16.05■□□□□ 0.16
EXOSC3-201ENST00000327304 TMEM104Q8NE00 496 aa16.05■□□□□ 0.16
EXOSC3-201ENST00000327304 BCL2L14Q9BZR8 327 aa16.05■□□□□ 0.16
EXOSC3-201ENST00000327304 NUDT15Q9NV35 164 aa16.05■□□□□ 0.16
EXOSC3-201ENST00000327304 ALG5Q9Y673 324 aa16.05■□□□□ 0.16
EXOSC3-201ENST00000327304 MPIG6BO95866 241 aa16.05■□□□□ 0.16
EXOSC3-201ENST00000327304 IGFBP2P18065 325 aa16.05■□□□□ 0.16
EXOSC3-201ENST00000327304 VEGFCP49767 419 aa16.05■□□□□ 0.16
EXOSC3-201ENST00000327304 RBP2P50120 134 aa16.05■□□□□ 0.16
EXOSC3-201ENST00000327304 CCR6P51684 374 aa16.05■□□□□ 0.16
EXOSC3-201ENST00000327304 FUT6P51993 359 aa16.05■□□□□ 0.16
EXOSC3-201ENST00000327304 MTCP1P56278 107 aa16.05■□□□□ 0.16
EXOSC3-201ENST00000327304 ZP1P60852 638 aa16.05■□□□□ 0.16
EXOSC3-201ENST00000327304 Q6ZTK2 550 aa16.05■□□□□ 0.16
EXOSC3-201ENST00000327304 FAM89BQ8N5H3 189 aa16.05■□□□□ 0.16
EXOSC3-201ENST00000327304 OR56B4Q8NH76 319 aa16.05■□□□□ 0.16
EXOSC3-201ENST00000327304 BORCS8Q96FH0 119 aa16.05■□□□□ 0.16
EXOSC3-201ENST00000327304 ESRP2Q9H6T0 727 aaKnown RBP16.05■□□□□ 0.16
EXOSC3-201ENST00000327304 ING4Q9UNL4 249 aa16.05■□□□□ 0.16
EXOSC3-201ENST00000327304 SLC7A11Q9UPY5 501 aa16.05■□□□□ 0.16
EXOSC3-201ENST00000327304 CRTAPO75718 401 aaPredicted RBP16.04■□□□□ 0.16
EXOSC3-201ENST00000327304 CCNKO75909 580 aa16.04■□□□□ 0.16
EXOSC3-201ENST00000327304 AKAIN1P0CW23 69 aa16.04■□□□□ 0.16
EXOSC3-201ENST00000327304 MPV17P39210 176 aa16.04■□□□□ 0.16
EXOSC3-201ENST00000327304 CDNFQ49AH0 187 aa16.04■□□□□ 0.16
EXOSC3-201ENST00000327304 ADAM5Q6NVV9 412 aa16.04■□□□□ 0.16
EXOSC3-201ENST00000327304 FBXW12Q6X9E4 464 aa16.04■□□□□ 0.16
EXOSC3-201ENST00000327304 TMEM229BQ8NBD8 167 aa16.04■□□□□ 0.16
EXOSC3-201ENST00000327304 OR56B1Q8NGI3 324 aa16.04■□□□□ 0.16
EXOSC3-201ENST00000327304 MARS2Q96GW9 593 aaKnown RBP16.04■□□□□ 0.16
EXOSC3-201ENST00000327304 FZR1Q9UM11 496 aa16.04■□□□□ 0.16
EXOSC3-201ENST00000327304 DEFB108AA8MXU0 73 aa16.03■□□□□ 0.16
EXOSC3-201ENST00000327304 GSTP1P09211 210 aaKnown RBP16.03■□□□□ 0.16
EXOSC3-201ENST00000327304 TAS2R19P59542 299 aa16.03■□□□□ 0.16
EXOSC3-201ENST00000327304 RPS27AP62979 156 aaKnown RBP16.03■□□□□ 0.16
EXOSC3-201ENST00000327304 SPTAN1Q13813 2472 aaKnown RBP16.03■□□□□ 0.16
EXOSC3-201ENST00000327304 MSMPQ1L6U9 139 aa16.03■□□□□ 0.16
EXOSC3-201ENST00000327304 SLC22A6Q4U2R8 563 aa16.03■□□□□ 0.16
EXOSC3-201ENST00000327304 BEX5Q5H9J7 111 aa16.03■□□□□ 0.16
EXOSC3-201ENST00000327304 DMRTC1Q5HYR2 192 aa16.03■□□□□ 0.16
EXOSC3-201ENST00000327304 TMEM255AQ5JRV8 349 aa16.03■□□□□ 0.16
EXOSC3-201ENST00000327304 SFRP4Q6FHJ7 346 aaPredicted RBP16.03■□□□□ 0.16
EXOSC3-201ENST00000327304 SLC22A25Q6T423 547 aa16.03■□□□□ 0.16
EXOSC3-201ENST00000327304 UNQ6126/PRO20091Q6UXV3 157 aa16.03■□□□□ 0.16
EXOSC3-201ENST00000327304 C1QL2Q7Z5L3 287 aa16.03■□□□□ 0.16
EXOSC3-201ENST00000327304 CHST4Q8NCG5 386 aa16.03■□□□□ 0.16
EXOSC3-201ENST00000327304 CSNK2A3Q8NEV1 391 aa16.03■□□□□ 0.16
EXOSC3-201ENST00000327304 OR56B2PQ8NGI1 322 aa16.03■□□□□ 0.16
EXOSC3-201ENST00000327304 OR5D18Q8NGL1 313 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms