RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 ZNF107Q9UII5 783 aaPredicted RBP11.78□□□□□ -0.52
DDX54-201ENST00000306014 ONECUT2O95948 504 aa11.78□□□□□ -0.52
DDX54-201ENST00000306014 SLC25A4P12235 298 aa11.78□□□□□ -0.52
DDX54-201ENST00000306014 RNF212Q495C1 297 aa11.78□□□□□ -0.52
DDX54-201ENST00000306014 OR10J5Q8NHC4 309 aa11.78□□□□□ -0.52
DDX54-201ENST00000306014 SAT2Q96F10 170 aaPredicted RBP11.78□□□□□ -0.52
DDX54-201ENST00000306014 C17orf51A8MQB3 221 aa11.77□□□□□ -0.52
DDX54-201ENST00000306014 PIAS2O75928 621 aa11.77□□□□□ -0.52
DDX54-201ENST00000306014 HPP00738 406 aa11.77□□□□□ -0.52
DDX54-201ENST00000306014 OR5AC1P0C628 307 aa11.77□□□□□ -0.52
DDX54-201ENST00000306014 KCNJ3P48549 501 aa11.77□□□□□ -0.52
DDX54-201ENST00000306014 RRADP55042 308 aa11.77□□□□□ -0.52
DDX54-201ENST00000306014 TMEM104Q8NE00 496 aa11.77□□□□□ -0.52
DDX54-201ENST00000306014 MRPS24Q96EL2 167 aaKnown RBP11.77□□□□□ -0.52
DDX54-201ENST00000306014 SUCNR1Q9BXA5 334 aa11.77□□□□□ -0.52
DDX54-201ENST00000306014 MFRPQ9BY79 579 aa11.77□□□□□ -0.52
DDX54-201ENST00000306014 OBP2BQ9NPH6 170 aa11.77□□□□□ -0.52
DDX54-201ENST00000306014 PIPOXQ9P0Z9 390 aa11.77□□□□□ -0.52
DDX54-201ENST00000306014 A0A087WV48 116 aa11.77□□□□□ -0.53
DDX54-201ENST00000306014 A0A1W2PQD3 144 aa11.77□□□□□ -0.53
DDX54-201ENST00000306014 ZNF98A6NK75 572 aa11.77□□□□□ -0.53
DDX54-201ENST00000306014 ABCD4O14678 606 aa11.77□□□□□ -0.53
DDX54-201ENST00000306014 EFSO43281 561 aa11.77□□□□□ -0.53
DDX54-201ENST00000306014 WDR1O75083 606 aa11.77□□□□□ -0.53
DDX54-201ENST00000306014 IL11P20809 199 aa11.77□□□□□ -0.53
DDX54-201ENST00000306014 RAB1AP62820 205 aa11.77□□□□□ -0.53
DDX54-201ENST00000306014 EXT1Q16394 746 aa11.77□□□□□ -0.53
DDX54-201ENST00000306014 AMDHD2Q9Y303 409 aa11.77□□□□□ -0.53
DDX54-201ENST00000306014 A0A1W2PP11 408 aa11.77□□□□□ -0.53
DDX54-201ENST00000306014 TTRP02766 147 aa11.77□□□□□ -0.53
DDX54-201ENST00000306014 ARG1P05089 322 aa11.77□□□□□ -0.53
DDX54-201ENST00000306014 SPP1P10451 314 aa11.77□□□□□ -0.53
DDX54-201ENST00000306014 NFYBP25208 207 aa11.77□□□□□ -0.53
DDX54-201ENST00000306014 BAXQ07812 192 aa11.77□□□□□ -0.53
DDX54-201ENST00000306014 C1orf87Q8N0U7 546 aa11.77□□□□□ -0.53
DDX54-201ENST00000306014 ROBO4Q8WZ75 1007 aa11.77□□□□□ -0.53
DDX54-201ENST00000306014 WNT16Q9UBV4 365 aa11.77□□□□□ -0.53
DDX54-201ENST00000306014 ZNF587BE7ETH6 402 aa11.77□□□□□ -0.53
DDX54-201ENST00000306014 CYB5BO43169 146 aa11.77□□□□□ -0.53
DDX54-201ENST00000306014 HAAOP46952 286 aa11.77□□□□□ -0.53
DDX54-201ENST00000306014 SYT13Q7L8C5 426 aa11.77□□□□□ -0.53
DDX54-201ENST00000306014 SSX9Q7RTT3 188 aa11.77□□□□□ -0.53
DDX54-201ENST00000306014 SEC11CQ9BY50 192 aa11.77□□□□□ -0.53
DDX54-201ENST00000306014 CRLF2Q9HC73 371 aa11.77□□□□□ -0.53
DDX54-201ENST00000306014 MRPL22Q9NWU5 206 aaKnown RBP11.77□□□□□ -0.53
DDX54-201ENST00000306014 ARHGEF17Q96PE2 2063 aaPredicted RBP11.76□□□□□ -0.53
DDX54-201ENST00000306014 OR2M5A3KFT3 312 aa11.76□□□□□ -0.53
DDX54-201ENST00000306014 HLA-HP01893 362 aa11.76□□□□□ -0.53
DDX54-201ENST00000306014 ICAM2P13598 275 aa11.76□□□□□ -0.53
DDX54-201ENST00000306014 RPS4XP62701 263 aaKnown RBP11.76□□□□□ -0.53
DDX54-201ENST00000306014 SPANXN5Q5MJ07 72 aa11.76□□□□□ -0.53
DDX54-201ENST00000306014 OIT3Q8WWZ8 545 aa11.76□□□□□ -0.53
DDX54-201ENST00000306014 RSRP1Q9BUV0 290 aa11.76□□□□□ -0.53
DDX54-201ENST00000306014 MYOTQ9UBF9 498 aa11.76□□□□□ -0.53
DDX54-201ENST00000306014 EPOPA6NHQ4 379 aa11.76□□□□□ -0.53
DDX54-201ENST00000306014 LIPT2A6NK58 231 aa11.76□□□□□ -0.53
DDX54-201ENST00000306014 CER1O95813 267 aa11.76□□□□□ -0.53
DDX54-201ENST00000306014 LIMK1P53667 647 aa11.76□□□□□ -0.53
DDX54-201ENST00000306014 TAS2R30P59541 319 aa11.76□□□□□ -0.53
DDX54-201ENST00000306014 BATFQ16520 125 aa11.76□□□□□ -0.53
DDX54-201ENST00000306014 KMT5CQ86Y97 462 aa11.76□□□□□ -0.53
DDX54-201ENST00000306014 GCM1Q9NP62 436 aa11.76□□□□□ -0.53
DDX54-201ENST00000306014 MT-ND4LP03901 98 aa11.76□□□□□ -0.53
DDX54-201ENST00000306014 FGF2P09038 288 aa11.76□□□□□ -0.53
DDX54-201ENST00000306014 PATE4P0C8F1 98 aa11.76□□□□□ -0.53
DDX54-201ENST00000306014 ERVK-16P61578 105 aa11.76□□□□□ -0.53
DDX54-201ENST00000306014 TRIM61Q5EBN2 209 aa11.76□□□□□ -0.53
DDX54-201ENST00000306014 JMJD6Q6NYC1 403 aaPredicted RBP11.76□□□□□ -0.53
DDX54-201ENST00000306014 SLC22A18ASQ8N1D0 253 aa11.76□□□□□ -0.53
DDX54-201ENST00000306014 RAB39BQ96DA2 213 aa11.76□□□□□ -0.53
DDX54-201ENST00000306014 PECRQ9BY49 303 aa11.76□□□□□ -0.53
DDX54-201ENST00000306014 PLEKHF2Q9H8W4 249 aa11.76□□□□□ -0.53
DDX54-201ENST00000306014 PLEKHA3Q9HB20 300 aa11.76□□□□□ -0.53
DDX54-201ENST00000306014 TP53TG5Q9Y2B4 290 aa11.76□□□□□ -0.53
DDX54-201ENST00000306014 KIF26BQ2KJY2 2108 aa11.76□□□□□ -0.53
DDX54-201ENST00000306014 SDK2Q58EX2 2172 aa11.76□□□□□ -0.53
DDX54-201ENST00000306014 J3QRE1 110 aa11.75□□□□□ -0.53
DDX54-201ENST00000306014 NXPH2O95156 264 aa11.75□□□□□ -0.53
DDX54-201ENST00000306014 IAPPP10997 89 aa11.75□□□□□ -0.53
DDX54-201ENST00000306014 RCC1P18754 421 aaPredicted RBP11.75□□□□□ -0.53
DDX54-201ENST00000306014 ZBTB25P24278 435 aa11.75□□□□□ -0.53
DDX54-201ENST00000306014 CLEC12BQ2HXU8 276 aa11.75□□□□□ -0.53
DDX54-201ENST00000306014 CEACAM16Q2WEN9 425 aa11.75□□□□□ -0.53
DDX54-201ENST00000306014 ZNF658BQ4V348 819 aaPredicted RBP11.75□□□□□ -0.53
DDX54-201ENST00000306014 PDLIM3Q53GG5 364 aaPredicted RBP11.75□□□□□ -0.53
DDX54-201ENST00000306014 AWAT1Q58HT5 328 aa11.75□□□□□ -0.53
DDX54-201ENST00000306014 LINC00696Q6ZRV3 163 aa11.75□□□□□ -0.53
DDX54-201ENST00000306014 SPSB1Q96BD6 273 aa11.75□□□□□ -0.53
DDX54-201ENST00000306014 PPP1R3CQ9UQK1 317 aa11.75□□□□□ -0.53
DDX54-201ENST00000306014 NCOR1O75376 2440 aa11.75□□□□□ -0.53
DDX54-201ENST00000306014 C5orf49A4QMS7 147 aa11.75□□□□□ -0.53
DDX54-201ENST00000306014 FAM24AA6NFZ4 105 aa11.75□□□□□ -0.53
DDX54-201ENST00000306014 ZNF727A8MUV8 499 aa11.75□□□□□ -0.53
DDX54-201ENST00000306014 DXOO77932 396 aaKnown RBP11.75□□□□□ -0.53
DDX54-201ENST00000306014 FABP1P07148 127 aa11.75□□□□□ -0.53
DDX54-201ENST00000306014 CYB561P49447 251 aa11.75□□□□□ -0.53
DDX54-201ENST00000306014 ANKRD37Q7Z713 158 aa11.75□□□□□ -0.53
DDX54-201ENST00000306014 OR5AS1Q8N127 324 aa11.75□□□□□ -0.53
DDX54-201ENST00000306014 ZNF721Q8TF20 911 aa11.75□□□□□ -0.53
DDX54-201ENST00000306014 RFC3P40938 356 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms