RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 CDK5Q00535 292 aa7.23□□□□□ -1.25
TPM3-201ENST00000271850 GINS1Q14691 196 aa7.23□□□□□ -1.25
TPM3-201ENST00000271850 LRRC75BQ2VPJ9 315 aa7.23□□□□□ -1.25
TPM3-201ENST00000271850 CEACAM21Q3KPI0 293 aa7.23□□□□□ -1.25
TPM3-201ENST00000271850 SPATS1Q496A3 300 aa7.23□□□□□ -1.25
TPM3-201ENST00000271850 TMEM236Q5W0B7 351 aa7.23□□□□□ -1.25
TPM3-201ENST00000271850 TMEM200BQ69YZ2 307 aa7.23□□□□□ -1.25
TPM3-201ENST00000271850 HAGHLQ6PII5 290 aaPredicted RBP7.23□□□□□ -1.25
TPM3-201ENST00000271850 C16orf89Q6UX73 402 aa7.23□□□□□ -1.25
TPM3-201ENST00000271850 THAP5Q7Z6K1 395 aa7.23□□□□□ -1.25
TPM3-201ENST00000271850 CPOQ8IVL8 374 aa7.23□□□□□ -1.25
TPM3-201ENST00000271850 FAM185AQ8N0U4 392 aa7.23□□□□□ -1.25
TPM3-201ENST00000271850 Q8N2B8 174 aa7.23□□□□□ -1.25
TPM3-201ENST00000271850 POC1AQ8NBT0 407 aa7.23□□□□□ -1.25
TPM3-201ENST00000271850 OR4M1Q8NGD0 313 aa7.23□□□□□ -1.25
TPM3-201ENST00000271850 OR5K1Q8NHB7 308 aa7.23□□□□□ -1.25
TPM3-201ENST00000271850 TEX47Q8TBZ9 253 aa7.23□□□□□ -1.25
TPM3-201ENST00000271850 THEM6Q8WUY1 208 aa7.23□□□□□ -1.25
TPM3-201ENST00000271850 OTULINQ96BN8 352 aa7.23□□□□□ -1.25
TPM3-201ENST00000271850 MED30Q96HR3 178 aa7.23□□□□□ -1.25
TPM3-201ENST00000271850 TEAD3Q99594 435 aa7.23□□□□□ -1.25
TPM3-201ENST00000271850 TTTY10Q9BZA0 68 aa7.23□□□□□ -1.25
TPM3-201ENST00000271850 MMP28Q9H239 520 aa7.23□□□□□ -1.25
TPM3-201ENST00000271850 NIPAL2Q9H841 368 aa7.23□□□□□ -1.25
TPM3-201ENST00000271850 REEP1Q9H902 201 aa7.23□□□□□ -1.25
TPM3-201ENST00000271850 HES4Q9HCC6 221 aa7.23□□□□□ -1.25
TPM3-201ENST00000271850 DSCAML1Q8TD84 2053 aa7.23□□□□□ -1.25
TPM3-201ENST00000271850 TRBV23-1A0A0A0MS06 115 aa7.22□□□□□ -1.25
TPM3-201ENST00000271850 A0A0U1RQV5 110 aa7.22□□□□□ -1.25
TPM3-201ENST00000271850 MEX3AA1L020 520 aaKnown RBP7.22□□□□□ -1.25
TPM3-201ENST00000271850 ODF3BA8MYP8 253 aa7.22□□□□□ -1.25
TPM3-201ENST00000271850 PRR23D1E9PI22 279 aaPredicted RBP7.22□□□□□ -1.25
TPM3-201ENST00000271850 F8VVB4 439 aa7.22□□□□□ -1.25
TPM3-201ENST00000271850 F8VWA3 439 aa7.22□□□□□ -1.25
TPM3-201ENST00000271850 F8W735 103 aaPredicted RBP7.22□□□□□ -1.25
TPM3-201ENST00000271850 H3BN98 237 aa7.22□□□□□ -1.25
TPM3-201ENST00000271850 MAGEB4O15481 346 aaPredicted RBP7.22□□□□□ -1.25
TPM3-201ENST00000271850 ALX3O95076 343 aa7.22□□□□□ -1.25
TPM3-201ENST00000271850 APOC1P02654 83 aa7.22□□□□□ -1.25
TPM3-201ENST00000271850 MRPL3P09001 348 aaKnown RBP7.22□□□□□ -1.25
TPM3-201ENST00000271850 PGA5P0DJD9 388 aa7.22□□□□□ -1.25
TPM3-201ENST00000271850 PRR23D2P0DMB1 279 aaPredicted RBP7.22□□□□□ -1.25
TPM3-201ENST00000271850 PRKACGP22612 351 aa7.22□□□□□ -1.25
TPM3-201ENST00000271850 COX7A1P24310 79 aa7.22□□□□□ -1.25
TPM3-201ENST00000271850 POU1F1P28069 291 aa7.22□□□□□ -1.25
TPM3-201ENST00000271850 GNG3P63215 75 aa7.22□□□□□ -1.25
TPM3-201ENST00000271850 TRIM25Q14258 630 aaKnown RBP7.22□□□□□ -1.25
TPM3-201ENST00000271850 AANATQ16613 207 aa7.22□□□□□ -1.25
TPM3-201ENST00000271850 TMEM95Q3KNT9 176 aa7.22□□□□□ -1.25
TPM3-201ENST00000271850 HSP90B2PQ58FF3 399 aa7.22□□□□□ -1.25
TPM3-201ENST00000271850 TMEM42Q69YG0 159 aa7.22□□□□□ -1.25
TPM3-201ENST00000271850 ZNF782Q6ZMW2 699 aaPredicted RBP7.22□□□□□ -1.25
TPM3-201ENST00000271850 PLEKHG7Q6ZR37 379 aa7.22□□□□□ -1.25
TPM3-201ENST00000271850 BCDIN3DQ7Z5W3 292 aaKnown RBP7.22□□□□□ -1.25
TPM3-201ENST00000271850 DHFR2Q86XF0 187 aa7.22□□□□□ -1.25
TPM3-201ENST00000271850 OR51G2Q8NGK0 314 aa7.22□□□□□ -1.25
TPM3-201ENST00000271850 OR51E1Q8TCB6 317 aa7.22□□□□□ -1.25
TPM3-201ENST00000271850 GIPC3Q8TF64 312 aa7.22□□□□□ -1.25
TPM3-201ENST00000271850 OR8B4Q96RC9 309 aa7.22□□□□□ -1.25
TPM3-201ENST00000271850 NRIP2Q9BQI9 281 aa7.22□□□□□ -1.25
TPM3-201ENST00000271850 CHID1Q9BWS9 393 aa7.22□□□□□ -1.25
TPM3-201ENST00000271850 WNT10AQ9GZT5 417 aa7.22□□□□□ -1.25
TPM3-201ENST00000271850 PBOV1Q9GZY1 135 aa7.22□□□□□ -1.25
TPM3-201ENST00000271850 RANBP3Q9H6Z4 567 aaPredicted RBP7.22□□□□□ -1.25
TPM3-201ENST00000271850 ABCB9Q9NP78 766 aa7.22□□□□□ -1.25
TPM3-201ENST00000271850 GPR84Q9NQS5 396 aa7.22□□□□□ -1.25
TPM3-201ENST00000271850 ARL2BPQ9Y2Y0 163 aa7.22□□□□□ -1.25
TPM3-201ENST00000271850 SF3B6Q9Y3B4 125 aaKnown RBP7.22□□□□□ -1.25
TPM3-201ENST00000271850 A0A1B0GTI1 187 aa7.21□□□□□ -1.26
TPM3-201ENST00000271850 PQLC2LA1A4F0 135 aa7.21□□□□□ -1.26
TPM3-201ENST00000271850 A6NDX4 124 aa7.21□□□□□ -1.26
TPM3-201ENST00000271850 A6NIN4 97 aa7.21□□□□□ -1.26
TPM3-201ENST00000271850 VGLL3A8MV65 326 aa7.21□□□□□ -1.26
TPM3-201ENST00000271850 B2RBV5 119 aa7.21□□□□□ -1.26
TPM3-201ENST00000271850 H0YAE9 185 aa7.21□□□□□ -1.26
TPM3-201ENST00000271850 M0R129 80 aa7.21□□□□□ -1.26
TPM3-201ENST00000271850 PRODHO43272 600 aa7.21□□□□□ -1.26
TPM3-201ENST00000271850 TTRP02766 147 aa7.21□□□□□ -1.26
TPM3-201ENST00000271850 VSIG10L2P0DP72 767 aa7.21□□□□□ -1.26
TPM3-201ENST00000271850 RAP2AP10114 183 aa7.21□□□□□ -1.26
TPM3-201ENST00000271850 ERVK11-1P61568 191 aa7.21□□□□□ -1.26
TPM3-201ENST00000271850 RPL31P62899 125 aaKnown RBP7.21□□□□□ -1.26
TPM3-201ENST00000271850 ROM1Q03395 351 aa7.21□□□□□ -1.26
TPM3-201ENST00000271850 APOFQ13790 326 aa7.21□□□□□ -1.26
TPM3-201ENST00000271850 FAM189A2Q15884 450 aa7.21□□□□□ -1.26
TPM3-201ENST00000271850 PLA1AQ53H76 456 aa7.21□□□□□ -1.26
TPM3-201ENST00000271850 Q6ZSR3 168 aa7.21□□□□□ -1.26
TPM3-201ENST00000271850 Q6ZTK2 550 aa7.21□□□□□ -1.26
TPM3-201ENST00000271850 MOB3CQ70IA8 216 aa7.21□□□□□ -1.26
TPM3-201ENST00000271850 TMEM219Q86XT9 240 aa7.21□□□□□ -1.26
TPM3-201ENST00000271850 CALHM1Q8IU99 346 aa7.21□□□□□ -1.26
TPM3-201ENST00000271850 FTMTQ8N4E7 242 aa7.21□□□□□ -1.26
TPM3-201ENST00000271850 OR5A2Q8NGI9 324 aa7.21□□□□□ -1.26
TPM3-201ENST00000271850 OR5D13Q8NGL4 314 aa7.21□□□□□ -1.26
TPM3-201ENST00000271850 OR4C13Q8NGP0 309 aa7.21□□□□□ -1.26
TPM3-201ENST00000271850 CANT1Q8WVQ1 401 aa7.21□□□□□ -1.26
TPM3-201ENST00000271850 CDCA4Q9BXL8 241 aa7.21□□□□□ -1.26
TPM3-201ENST00000271850 SLC25A19Q9HC21 320 aa7.21□□□□□ -1.26
TPM3-201ENST00000271850 GPR173Q9NS66 373 aa7.21□□□□□ -1.26
TPM3-201ENST00000271850 AURKAIP1Q9NWT8 199 aaPredicted RBP7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms