RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 FAM89BQ8N5H3 189 aa12.41□□□□□ -0.42
LDB3-209ENST00000623056 HSD17B11Q8NBQ5 300 aa12.41□□□□□ -0.42
LDB3-209ENST00000623056 OR10D4PQ8NGN7 298 aa12.41□□□□□ -0.42
LDB3-209ENST00000623056 ZNF721Q8TF20 911 aa12.41□□□□□ -0.42
LDB3-209ENST00000623056 GALNT14Q96FL9 552 aa12.41□□□□□ -0.42
LDB3-209ENST00000623056 SHDQ96IW2 340 aa12.41□□□□□ -0.42
LDB3-209ENST00000623056 FAM71F1Q96KD3 344 aaPredicted RBP12.41□□□□□ -0.42
LDB3-209ENST00000623056 GPR84Q9NQS5 396 aa12.41□□□□□ -0.42
LDB3-209ENST00000623056 LANCL2Q9NS86 450 aa12.41□□□□□ -0.42
LDB3-209ENST00000623056 LRP4O75096 1905 aa12.41□□□□□ -0.42
LDB3-209ENST00000623056 A0A1B0GW64 132 aa12.4□□□□□ -0.42
LDB3-209ENST00000623056 FOXI3A8MTJ6 420 aaPredicted RBP12.4□□□□□ -0.42
LDB3-209ENST00000623056 ZNF878C9JN71 531 aa12.4□□□□□ -0.42
LDB3-209ENST00000623056 GPR137BO60478 399 aa12.4□□□□□ -0.42
LDB3-209ENST00000623056 DDAH2O95865 285 aa12.4□□□□□ -0.42
LDB3-209ENST00000623056 CTSDP07339 412 aaPredicted RBP12.4□□□□□ -0.42
LDB3-209ENST00000623056 ZNF17P17021 662 aa12.4□□□□□ -0.42
LDB3-209ENST00000623056 SERPINA2P20848 420 aa12.4□□□□□ -0.42
LDB3-209ENST00000623056 BLVRBP30043 206 aaPredicted RBP12.4□□□□□ -0.42
LDB3-209ENST00000623056 APOBEC1P41238 236 aaKnown RBP12.4□□□□□ -0.42
LDB3-209ENST00000623056 PLCXD2Q0VAA5 305 aa12.4□□□□□ -0.42
LDB3-209ENST00000623056 ZNF674Q2M3X9 581 aa12.4□□□□□ -0.42
LDB3-209ENST00000623056 PLXDC2Q6UX71 529 aa12.4□□□□□ -0.42
LDB3-209ENST00000623056 SPNS3Q6ZMD2 512 aa12.4□□□□□ -0.42
LDB3-209ENST00000623056 LILRB2Q8N423 598 aa12.4□□□□□ -0.42
LDB3-209ENST00000623056 ZNF610Q8N9Z0 462 aa12.4□□□□□ -0.42
LDB3-209ENST00000623056 LFNGQ8NES3 379 aa12.4□□□□□ -0.42
LDB3-209ENST00000623056 OR8B12Q8NGG6 310 aa12.4□□□□□ -0.42
LDB3-209ENST00000623056 MFSD8Q8NHS3 518 aa12.4□□□□□ -0.42
LDB3-209ENST00000623056 FAM213BQ8TBF2 198 aa12.4□□□□□ -0.42
LDB3-209ENST00000623056 SGK3Q96BR1 496 aa12.4□□□□□ -0.42
LDB3-209ENST00000623056 NTNG2Q96CW9 530 aa12.4□□□□□ -0.42
LDB3-209ENST00000623056 TGM7Q96PF1 710 aa12.4□□□□□ -0.42
LDB3-209ENST00000623056 PIGQQ9BRB3 760 aa12.4□□□□□ -0.42
LDB3-209ENST00000623056 PECRQ9BY49 303 aa12.4□□□□□ -0.42
LDB3-209ENST00000623056 ZNF701Q9NV72 531 aaPredicted RBP12.4□□□□□ -0.42
LDB3-209ENST00000623056 XRCC2O43543 280 aa12.4□□□□□ -0.42
LDB3-209ENST00000623056 DIRAS3O95661 229 aa12.4□□□□□ -0.42
LDB3-209ENST00000623056 TNFP01375 233 aa12.4□□□□□ -0.42
LDB3-209ENST00000623056 HIST1H1BP16401 226 aaKnown RBP12.4□□□□□ -0.42
LDB3-209ENST00000623056 HSF1Q00613 529 aa12.4□□□□□ -0.42
LDB3-209ENST00000623056 ZP4Q12836 540 aa12.4□□□□□ -0.42
LDB3-209ENST00000623056 TMEM182Q6ZP80 229 aaPredicted RBP12.4□□□□□ -0.42
LDB3-209ENST00000623056 C9orf40Q8IXQ3 194 aa12.4□□□□□ -0.42
LDB3-209ENST00000623056 LRRC18Q8N456 261 aa12.4□□□□□ -0.42
LDB3-209ENST00000623056 KNL1Q8NG31 2342 aa12.4□□□□□ -0.42
LDB3-209ENST00000623056 OR5D18Q8NGL1 313 aa12.4□□□□□ -0.42
LDB3-209ENST00000623056 ZDHHC12Q96GR4 267 aa12.4□□□□□ -0.42
LDB3-209ENST00000623056 IGKV1-9A0A0C4DH69 117 aa12.39□□□□□ -0.43
LDB3-209ENST00000623056 K7N7A8 449 aa12.39□□□□□ -0.43
LDB3-209ENST00000623056 CXCL1P09341 107 aa12.39□□□□□ -0.43
LDB3-209ENST00000623056 HOXB2P14652 356 aa12.39□□□□□ -0.43
LDB3-209ENST00000623056 RBP2P50120 134 aa12.39□□□□□ -0.43
LDB3-209ENST00000623056 ZNF343Q6P1L6 599 aa12.39□□□□□ -0.43
LDB3-209ENST00000623056 C1QL2Q7Z5L3 287 aa12.39□□□□□ -0.43
LDB3-209ENST00000623056 SSC4DQ8WTU2 575 aa12.39□□□□□ -0.43
LDB3-209ENST00000623056 Q8WTZ3 238 aa12.39□□□□□ -0.43
LDB3-209ENST00000623056 S100PBPQ96BU1 408 aa12.39□□□□□ -0.43
LDB3-209ENST00000623056 JSRP1Q96MG2 331 aaPredicted RBP12.39□□□□□ -0.43
LDB3-209ENST00000623056 GABRG3Q99928 467 aa12.39□□□□□ -0.43
LDB3-209ENST00000623056 EMC6Q9BV81 110 aa12.39□□□□□ -0.43
LDB3-209ENST00000623056 MOB1AQ9H8S9 216 aa12.39□□□□□ -0.43
LDB3-209ENST00000623056 ZNF319Q9P2F9 582 aa12.39□□□□□ -0.43
LDB3-209ENST00000623056 ZDHHC8Q9ULC8 765 aa12.39□□□□□ -0.43
LDB3-209ENST00000623056 CXorf65A6NEN9 183 aa12.39□□□□□ -0.43
LDB3-209ENST00000623056 DHRS7CA6NNS2 312 aa12.39□□□□□ -0.43
LDB3-209ENST00000623056 SEC14L6B5MCN3 397 aa12.39□□□□□ -0.43
LDB3-209ENST00000623056 H3BQ15 152 aa12.39□□□□□ -0.43
LDB3-209ENST00000623056 BCAT2O15382 392 aaPredicted RBP12.39□□□□□ -0.43
LDB3-209ENST00000623056 HIST1H2BKO60814 126 aa12.39□□□□□ -0.43
LDB3-209ENST00000623056 HIST1H2BJP06899 126 aa12.39□□□□□ -0.43
LDB3-209ENST00000623056 HIST1H2BOP23527 126 aa12.39□□□□□ -0.43
LDB3-209ENST00000623056 HIST1H2BBP33778 126 aa12.39□□□□□ -0.43
LDB3-209ENST00000623056 ECI1P42126 302 aa12.39□□□□□ -0.43
LDB3-209ENST00000623056 TNFRSF4P43489 277 aa12.39□□□□□ -0.43
LDB3-209ENST00000623056 HIST1H2BDP58876 126 aa12.39□□□□□ -0.43
LDB3-209ENST00000623056 HIST1H2BCP62807 126 aa12.39□□□□□ -0.43
LDB3-209ENST00000623056 HIST2H2BEQ16778 126 aa12.39□□□□□ -0.43
LDB3-209ENST00000623056 HIKESHIQ53FT3 197 aa12.39□□□□□ -0.43
LDB3-209ENST00000623056 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.39□□□□□ -0.43
LDB3-209ENST00000623056 GPR157Q5UAW9 335 aa12.39□□□□□ -0.43
LDB3-209ENST00000623056 HLA-DQA1Q5Y7H0 255 aa12.39□□□□□ -0.43
LDB3-209ENST00000623056 H1FNTQ75WM6 255 aaPredicted RBP12.39□□□□□ -0.43
LDB3-209ENST00000623056 SSX9Q7RTT3 188 aa12.39□□□□□ -0.43
LDB3-209ENST00000623056 SLC22A18ASQ8N1D0 253 aa12.39□□□□□ -0.43
LDB3-209ENST00000623056 APCDD1LQ8NCL9 501 aa12.39□□□□□ -0.43
LDB3-209ENST00000623056 OR13H1Q8NG92 308 aa12.39□□□□□ -0.43
LDB3-209ENST00000623056 HIST1H2BHQ93079 126 aa12.39□□□□□ -0.43
LDB3-209ENST00000623056 RAB39BQ96DA2 213 aa12.39□□□□□ -0.43
LDB3-209ENST00000623056 HIST1H2BNQ99877 126 aa12.39□□□□□ -0.43
LDB3-209ENST00000623056 HIST1H2BMQ99879 126 aa12.39□□□□□ -0.43
LDB3-209ENST00000623056 PADI1Q9ULC6 663 aa12.39□□□□□ -0.43
LDB3-209ENST00000623056 LHFPL6Q9Y693 200 aa12.39□□□□□ -0.43
LDB3-209ENST00000623056 SERPINE3A8MV23 424 aa12.38□□□□□ -0.43
LDB3-209ENST00000623056 TMEM150CB9EJG8 249 aa12.38□□□□□ -0.43
LDB3-209ENST00000623056 TAGLN2P37802 199 aaKnown RBP12.38□□□□□ -0.43
LDB3-209ENST00000623056 ZNF121P58317 390 aaPredicted RBP12.38□□□□□ -0.43
LDB3-209ENST00000623056 YPEL5P62699 121 aa12.38□□□□□ -0.43
LDB3-209ENST00000623056 CCL20P78556 96 aa12.38□□□□□ -0.43
LDB3-209ENST00000623056 NHLH2Q02577 135 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms