RNA–Protein interactions for RNA: ENST00000619322.4

CBWD3-215, Transcript of COBW domain containing 3, human

TSL 5

Gene CBWD3, Length 3,301 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD3-215	ENST00000619322	HEATR1	Q9H583	2144 aa	Known RBP	4.57	□□□□□ -1.68
CBWD3-215	ENST00000619322	HIVEP3	Q5T1R4	2406 aa		4.57	□□□□□ -1.68
CBWD3-215	ENST00000619322	LOC400499	M0QZD8	3231 aa		4.57	□□□□□ -1.68
CBWD3-215	ENST00000619322	TRDV1	A0A1B0GX56	115 aa		4.57	□□□□□ -1.68
CBWD3-215	ENST00000619322	MEX3A	A1L020	520 aa	Known RBP	4.57	□□□□□ -1.68
CBWD3-215	ENST00000619322	GLOD5	A6NK44	160 aa		4.57	□□□□□ -1.68
CBWD3-215	ENST00000619322		H7C1Q1	480 aa		4.57	□□□□□ -1.68
CBWD3-215	ENST00000619322	PLPP3	O14495	311 aa		4.57	□□□□□ -1.68
CBWD3-215	ENST00000619322	LANCL1	O43813	399 aa		4.57	□□□□□ -1.68
CBWD3-215	ENST00000619322	OR10H3	O60404	316 aa		4.57	□□□□□ -1.68
CBWD3-215	ENST00000619322	FOXH1	O75593	365 aa		4.57	□□□□□ -1.68
CBWD3-215	ENST00000619322	LALBA	P00709	142 aa		4.57	□□□□□ -1.68
CBWD3-215	ENST00000619322	CD1A	P06126	327 aa		4.57	□□□□□ -1.68
CBWD3-215	ENST00000619322	NR2F1	P10589	423 aa		4.57	□□□□□ -1.68
CBWD3-215	ENST00000619322	ERP29	P30040	261 aa	Known RBP	4.57	□□□□□ -1.68
CBWD3-215	ENST00000619322	GABRA3	P34903	492 aa		4.57	□□□□□ -1.68
CBWD3-215	ENST00000619322	PTGFR	P43088	359 aa		4.57	□□□□□ -1.68
CBWD3-215	ENST00000619322	DAP3	P51398	398 aa	Known RBP	4.57	□□□□□ -1.68
CBWD3-215	ENST00000619322	GGTLC2	Q14390	218 aa		4.57	□□□□□ -1.68
CBWD3-215	ENST00000619322	EXOSC7	Q15024	291 aa	Known RBP	4.57	□□□□□ -1.68
CBWD3-215	ENST00000619322	MAPK14	Q16539	360 aa		4.57	□□□□□ -1.68
CBWD3-215	ENST00000619322	GUCA2B	Q16661	112 aa		4.57	□□□□□ -1.68
CBWD3-215	ENST00000619322	KRTAP24-1	Q3LI83	254 aa		4.57	□□□□□ -1.68
CBWD3-215	ENST00000619322	KLHL22	Q53GT1	634 aa		4.57	□□□□□ -1.68
CBWD3-215	ENST00000619322	ZNF311	Q5JNZ3	666 aa		4.57	□□□□□ -1.68
CBWD3-215	ENST00000619322	TMPRSS11A	Q6ZMR5	421 aa		4.57	□□□□□ -1.68
CBWD3-215	ENST00000619322	H1FNT	Q75WM6	255 aa	Predicted RBP	4.57	□□□□□ -1.68
CBWD3-215	ENST00000619322	MARCH3	Q86UD3	253 aa		4.57	□□□□□ -1.68
CBWD3-215	ENST00000619322	NKAIN4	Q8IVV8	208 aa		4.57	□□□□□ -1.68
CBWD3-215	ENST00000619322	FTMT	Q8N4E7	242 aa		4.57	□□□□□ -1.68
CBWD3-215	ENST00000619322	TCEANC	Q8N8B7	351 aa		4.57	□□□□□ -1.68
CBWD3-215	ENST00000619322	OR11H7	Q8NGC8	314 aa		4.57	□□□□□ -1.68
CBWD3-215	ENST00000619322	ZNF596	Q8TC21	504 aa		4.57	□□□□□ -1.68
CBWD3-215	ENST00000619322	CDS1	Q92903	461 aa		4.57	□□□□□ -1.68
CBWD3-215	ENST00000619322	ZC3HAV1L	Q96H79	300 aa	Known RBP	4.57	□□□□□ -1.68
CBWD3-215	ENST00000619322	SAMD8	Q96LT4	415 aa		4.57	□□□□□ -1.68
CBWD3-215	ENST00000619322	FNDC11	Q9BVV2	318 aa		4.57	□□□□□ -1.68
CBWD3-215	ENST00000619322	TMEM38B	Q9NVV0	291 aa		4.57	□□□□□ -1.68
CBWD3-215	ENST00000619322	FLRT3	Q9NZU0	649 aa		4.57	□□□□□ -1.68
CBWD3-215	ENST00000619322	GRIP1	Q9Y3R0	1128 aa		4.57	□□□□□ -1.68
CBWD3-215	ENST00000619322	INSIG2	Q9Y5U4	225 aa		4.57	□□□□□ -1.68
CBWD3-215	ENST00000619322	CDH10	Q9Y6N8	788 aa		4.57	□□□□□ -1.68
CBWD3-215	ENST00000619322	ESPL1	Q14674	2120 aa		4.57	□□□□□ -1.68
CBWD3-215	ENST00000619322	CELSR3	Q9NYQ7	3312 aa		4.57	□□□□□ -1.68
CBWD3-215	ENST00000619322	OR6C68	A6NDL8	312 aa		4.57	□□□□□ -1.68
CBWD3-215	ENST00000619322	FABP12	A6NFH5	140 aa		4.57	□□□□□ -1.68
CBWD3-215	ENST00000619322	SRRM5	B3KS81	715 aa		4.57	□□□□□ -1.68
CBWD3-215	ENST00000619322	REM1	O75628	298 aa		4.57	□□□□□ -1.68
CBWD3-215	ENST00000619322	ALDOB	P05062	364 aa		4.57	□□□□□ -1.68
CBWD3-215	ENST00000619322	ST3GAL3	Q11203	375 aa		4.57	□□□□□ -1.68
CBWD3-215	ENST00000619322	ASAH1	Q13510	395 aa		4.57	□□□□□ -1.68
CBWD3-215	ENST00000619322	GRK1	Q15835	563 aa		4.57	□□□□□ -1.68
CBWD3-215	ENST00000619322	OR2B11	Q5JQS5	317 aa		4.57	□□□□□ -1.68
CBWD3-215	ENST00000619322	C1orf140	Q5VVS0	124 aa		4.57	□□□□□ -1.68
CBWD3-215	ENST00000619322	YRDC	Q86U90	279 aa	Known RBP	4.57	□□□□□ -1.68
CBWD3-215	ENST00000619322	GPAT4	Q86UL3	456 aa		4.57	□□□□□ -1.68
CBWD3-215	ENST00000619322	LRRC28	Q86X40	367 aa	Predicted RBP	4.57	□□□□□ -1.68
CBWD3-215	ENST00000619322	ZDHHC23	Q8IYP9	409 aa		4.57	□□□□□ -1.68
CBWD3-215	ENST00000619322	RNF152	Q8N8N0	203 aa		4.57	□□□□□ -1.68
CBWD3-215	ENST00000619322	OR9Q1	Q8NGQ5	310 aa		4.57	□□□□□ -1.68
CBWD3-215	ENST00000619322	OR52P1P	Q8NH57	321 aa		4.57	□□□□□ -1.68
CBWD3-215	ENST00000619322	TMEM255B	Q8WV15	326 aa		4.57	□□□□□ -1.68
CBWD3-215	ENST00000619322	SFT2D1	Q8WV19	159 aa		4.57	□□□□□ -1.68
CBWD3-215	ENST00000619322	PTP4A1	Q93096	173 aa		4.57	□□□□□ -1.68
CBWD3-215	ENST00000619322	IL4I1	Q96RQ9	567 aa		4.57	□□□□□ -1.68
CBWD3-215	ENST00000619322	ADO	Q96SZ5	270 aa		4.57	□□□□□ -1.68
CBWD3-215	ENST00000619322	MEGF9	Q9H1U4	602 aa		4.57	□□□□□ -1.68
CBWD3-215	ENST00000619322	ANKRA2	Q9H9E1	313 aa		4.57	□□□□□ -1.68
CBWD3-215	ENST00000619322	FLVCR2	Q9UPI3	526 aa		4.57	□□□□□ -1.68
CBWD3-215	ENST00000619322		X6R8D5	127 aa		4.57	□□□□□ -1.68
CBWD3-215	ENST00000619322	ATM	Q13315	3056 aa		4.57	□□□□□ -1.68
CBWD3-215	ENST00000619322		A0A0G2JN53	185 aa		4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322		A0A1W2PQL4	384 aa	Predicted RBP	4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	MS4A18	H0YCH9	400 aa		4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322		M0R1W7	72 aa		4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	DAO	P14920	347 aa		4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	ARSB	P15848	533 aa		4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	NQO2	P16083	231 aa		4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	RAB3A	P20336	220 aa		4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	MAK	P20794	623 aa		4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	SERPINF1	P36955	418 aa		4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	PPT1	P50897	306 aa		4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	RIDA	P52758	137 aa	Known RBP	4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	FABP5	Q01469	135 aa		4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	FAM27E3	Q08E93	113 aa		4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	TRAM1	Q15629	374 aa		4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	TOMM34	Q15785	309 aa	Predicted RBP	4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	MS4A18	Q3C1V0	323 aa		4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	FBLN7	Q53RD9	439 aa		4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	HIST2H2BC	Q6DN03	193 aa		4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	NIPAL3	Q6P499	406 aa		4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	TMEM91	Q6ZNR0	172 aa		4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	NR2C2AP	Q86WQ0	139 aa		4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	CLRN3	Q8NCR9	226 aa		4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	NOXO1	Q8NFA2	376 aa		4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	OR4C3	Q8NH37	302 aa		4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	FNDC9	Q8TBE3	224 aa		4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	XAGE5	Q8WWM1	108 aa		4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	C10orf35	Q96D05	121 aa		4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	HDHD2	Q9H0R4	259 aa		4.56	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms