RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 CCBE1Q6UXH8 406 aaPredicted RBP11.72□□□□□ -0.53
SDF2-202ENST00000585428 CYP2R1Q6VVX0 501 aa11.72□□□□□ -0.53
SDF2-202ENST00000585428 DEFB107AQ8IZN7 70 aa11.72□□□□□ -0.53
SDF2-202ENST00000585428 CD177Q8N6Q3 437 aa11.72□□□□□ -0.53
SDF2-202ENST00000585428 OR8B12Q8NGG6 310 aa11.72□□□□□ -0.53
SDF2-202ENST00000585428 AQP3Q92482 292 aa11.72□□□□□ -0.53
SDF2-202ENST00000585428 CLPTM1LQ96KA5 538 aa11.72□□□□□ -0.53
SDF2-202ENST00000585428 CDCA4Q9BXL8 241 aa11.72□□□□□ -0.53
SDF2-202ENST00000585428 NPFFR1Q9GZQ6 430 aa11.72□□□□□ -0.53
SDF2-202ENST00000585428 OR51V1Q9H2C8 321 aa11.72□□□□□ -0.53
SDF2-202ENST00000585428 U3KQV3 271 aa11.72□□□□□ -0.53
SDF2-202ENST00000585428 TET2Q6N021 2002 aaPredicted RBP11.72□□□□□ -0.53
SDF2-202ENST00000585428 A0A0U1RQV5 110 aa11.71□□□□□ -0.53
SDF2-202ENST00000585428 ACOD1A6NK06 481 aa11.71□□□□□ -0.53
SDF2-202ENST00000585428 RFPL4AA6NLU0 287 aa11.71□□□□□ -0.53
SDF2-202ENST00000585428 RFPL4AL1F8VTS6 287 aa11.71□□□□□ -0.53
SDF2-202ENST00000585428 XPNPEP2O43895 674 aa11.71□□□□□ -0.53
SDF2-202ENST00000585428 ALOX5APP20292 161 aa11.71□□□□□ -0.53
SDF2-202ENST00000585428 MAP2K3P46734 347 aa11.71□□□□□ -0.53
SDF2-202ENST00000585428 LOXL3P58215 753 aa11.71□□□□□ -0.53
SDF2-202ENST00000585428 OR2T5Q6IEZ7 315 aa11.71□□□□□ -0.53
SDF2-202ENST00000585428 ACP7Q6ZNF0 438 aa11.71□□□□□ -0.53
SDF2-202ENST00000585428 FAM185AQ8N0U4 392 aa11.71□□□□□ -0.53
SDF2-202ENST00000585428 IQCF1Q8N6M8 205 aa11.71□□□□□ -0.53
SDF2-202ENST00000585428 TMEM185AQ8NFB2 350 aa11.71□□□□□ -0.53
SDF2-202ENST00000585428 OR2T29Q8NH02 315 aa11.71□□□□□ -0.53
SDF2-202ENST00000585428 OTULINQ96BN8 352 aa11.71□□□□□ -0.53
SDF2-202ENST00000585428 FEVQ99581 238 aa11.71□□□□□ -0.53
SDF2-202ENST00000585428 MAGIXQ9H6Y5 334 aa11.71□□□□□ -0.53
SDF2-202ENST00000585428 NIPAL2Q9H841 368 aa11.71□□□□□ -0.53
SDF2-202ENST00000585428 ZNF702PQ9H963 129 aa11.71□□□□□ -0.53
SDF2-202ENST00000585428 ARL8BQ9NVJ2 186 aa11.71□□□□□ -0.53
SDF2-202ENST00000585428 TAGLN3Q9UI15 199 aa11.71□□□□□ -0.53
SDF2-202ENST00000585428 KLHDC2Q9Y2U9 406 aa11.71□□□□□ -0.53
SDF2-202ENST00000585428 SAMHD1Q9Y3Z3 626 aaKnown RBP11.71□□□□□ -0.53
SDF2-202ENST00000585428 ADARB2-AS1A8MUL3 147 aa11.7□□□□□ -0.54
SDF2-202ENST00000585428 SELENOFO60613 162 aa11.7□□□□□ -0.54
SDF2-202ENST00000585428 NOS1APO75052 506 aaPredicted RBP11.7□□□□□ -0.54
SDF2-202ENST00000585428 CD28P10747 220 aa11.7□□□□□ -0.54
SDF2-202ENST00000585428 ATP6V1B2P21281 511 aa11.7□□□□□ -0.54
SDF2-202ENST00000585428 PRDX2P32119 198 aa11.7□□□□□ -0.54
SDF2-202ENST00000585428 RAB13P51153 203 aa11.7□□□□□ -0.54
SDF2-202ENST00000585428 BMXP51813 675 aa11.7□□□□□ -0.54
SDF2-202ENST00000585428 PSMA6P60900 246 aaKnown RBP11.7□□□□□ -0.54
SDF2-202ENST00000585428 RPL31P62899 125 aaKnown RBP11.7□□□□□ -0.54
SDF2-202ENST00000585428 DMRTC1Q5HYR2 192 aa11.7□□□□□ -0.54
SDF2-202ENST00000585428 CEP78Q5JTW2 689 aa11.7□□□□□ -0.54
SDF2-202ENST00000585428 C16orf89Q6UX73 402 aa11.7□□□□□ -0.54
SDF2-202ENST00000585428 TRPM8Q7Z2W7 1104 aa11.7□□□□□ -0.54
SDF2-202ENST00000585428 THAP5Q7Z6K1 395 aa11.7□□□□□ -0.54
SDF2-202ENST00000585428 CALHM1Q8IU99 346 aa11.7□□□□□ -0.54
SDF2-202ENST00000585428 LYG1Q8N1E2 194 aa11.7□□□□□ -0.54
SDF2-202ENST00000585428 DYNAPQ8N1N2 210 aa11.7□□□□□ -0.54
SDF2-202ENST00000585428 ZNF561Q8N587 486 aa11.7□□□□□ -0.54
SDF2-202ENST00000585428 WNT10AQ9GZT5 417 aa11.7□□□□□ -0.54
SDF2-202ENST00000585428 MMP28Q9H239 520 aa11.7□□□□□ -0.54
SDF2-202ENST00000585428 REEP1Q9H902 201 aa11.7□□□□□ -0.54
SDF2-202ENST00000585428 MED4Q9NPJ6 270 aa11.7□□□□□ -0.54
SDF2-202ENST00000585428 A0A1W2PPH5 198 aa11.69□□□□□ -0.54
SDF2-202ENST00000585428 PRR23D1E9PI22 279 aaPredicted RBP11.69□□□□□ -0.54
SDF2-202ENST00000585428 IGLV3-1P01715 115 aa11.69□□□□□ -0.54
SDF2-202ENST00000585428 PRR23D2P0DMB1 279 aaPredicted RBP11.69□□□□□ -0.54
SDF2-202ENST00000585428 ATP6V1B1P15313 513 aa11.69□□□□□ -0.54
SDF2-202ENST00000585428 PAICSP22234 425 aaKnown RBP11.69□□□□□ -0.54
SDF2-202ENST00000585428 HCCSP53701 268 aa11.69□□□□□ -0.54
SDF2-202ENST00000585428 LGALS4P56470 323 aa11.69□□□□□ -0.54
SDF2-202ENST00000585428 HABP2Q14520 560 aaPredicted RBP11.69□□□□□ -0.54
SDF2-202ENST00000585428 NSUN5P1Q3KNT7 163 aa11.69□□□□□ -0.54
SDF2-202ENST00000585428 HSP90B2PQ58FF3 399 aa11.69□□□□□ -0.54
SDF2-202ENST00000585428 PLBD1Q6P4A8 553 aa11.69□□□□□ -0.54
SDF2-202ENST00000585428 HAGHLQ6PII5 290 aaPredicted RBP11.69□□□□□ -0.54
SDF2-202ENST00000585428 DEGS2Q6QHC5 323 aa11.69□□□□□ -0.54
SDF2-202ENST00000585428 LHFPL4Q7Z7J7 247 aa11.69□□□□□ -0.54
SDF2-202ENST00000585428 NDUFA11Q86Y39 141 aa11.69□□□□□ -0.54
SDF2-202ENST00000585428 POC1AQ8NBT0 407 aa11.69□□□□□ -0.54
SDF2-202ENST00000585428 WFDC9Q8NEX5 89 aa11.69□□□□□ -0.54
SDF2-202ENST00000585428 OR2T27Q8NH04 317 aa11.69□□□□□ -0.54
SDF2-202ENST00000585428 TEX47Q8TBZ9 253 aa11.69□□□□□ -0.54
SDF2-202ENST00000585428 MRAPQ8TCY5 172 aa11.69□□□□□ -0.54
SDF2-202ENST00000585428 NECAP2Q9NVZ3 263 aa11.69□□□□□ -0.54
SDF2-202ENST00000585428 FAM206AQ9NX38 181 aa11.69□□□□□ -0.54
SDF2-202ENST00000585428 NDE1Q9NXR1 346 aa11.69□□□□□ -0.54
SDF2-202ENST00000585428 PLXNB1O43157 2135 aa11.69□□□□□ -0.54
SDF2-202ENST00000585428 TMEM269A0A1B0GVZ9 245 aa11.68□□□□□ -0.54
SDF2-202ENST00000585428 hCG_1809904A0A1W2PP81 198 aa11.68□□□□□ -0.54
SDF2-202ENST00000585428 A0A1W2PPE2 198 aa11.68□□□□□ -0.54
SDF2-202ENST00000585428 A0A1W2PR64 198 aa11.68□□□□□ -0.54
SDF2-202ENST00000585428 A0A1W2PRV1 198 aa11.68□□□□□ -0.54
SDF2-202ENST00000585428 A6NDX4 124 aa11.68□□□□□ -0.54
SDF2-202ENST00000585428 OR5B21A6NL26 309 aa11.68□□□□□ -0.54
SDF2-202ENST00000585428 C17orf98A8MV24 154 aa11.68□□□□□ -0.54
SDF2-202ENST00000585428 H3BN98 237 aa11.68□□□□□ -0.54
SDF2-202ENST00000585428 PRODHO43272 600 aa11.68□□□□□ -0.54
SDF2-202ENST00000585428 FBXO24O75426 580 aa11.68□□□□□ -0.54
SDF2-202ENST00000585428 CCL3L1P16619 93 aa11.68□□□□□ -0.54
SDF2-202ENST00000585428 CAPZA1P52907 286 aa11.68□□□□□ -0.54
SDF2-202ENST00000585428 DLX6P56179 175 aa11.68□□□□□ -0.54
SDF2-202ENST00000585428 CDK5Q00535 292 aa11.68□□□□□ -0.54
SDF2-202ENST00000585428 MS4A2Q01362 244 aa11.68□□□□□ -0.54
SDF2-202ENST00000585428 RIPPLY1Q0D2K3 151 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms