RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 OR5D18Q8NGL1 313 aa15.35■□□□□ 0.05
CLPX-203ENST00000558958 DIRC2Q96SL1 478 aa15.35■□□□□ 0.05
CLPX-203ENST00000558958 OR51I2Q9H344 312 aa15.35■□□□□ 0.05
CLPX-203ENST00000558958 PTTG2Q9NZH5 202 aa15.35■□□□□ 0.05
CLPX-203ENST00000558958 CD8AP01732 235 aa15.34■□□□□ 0.05
CLPX-203ENST00000558958 COL8A1P27658 744 aa15.34■□□□□ 0.05
CLPX-203ENST00000558958 HAAOP46952 286 aa15.34■□□□□ 0.05
CLPX-203ENST00000558958 OR3A4PP47883 348 aa15.34■□□□□ 0.05
CLPX-203ENST00000558958 CLDN12P56749 244 aa15.34■□□□□ 0.05
CLPX-203ENST00000558958 SNRPD2P62316 118 aaKnown RBP15.34■□□□□ 0.05
CLPX-203ENST00000558958 PDZK1IP1Q13113 114 aa15.34■□□□□ 0.05
CLPX-203ENST00000558958 AGAP6Q5VW22 663 aa15.34■□□□□ 0.05
CLPX-203ENST00000558958 DTX2Q86UW9 622 aa15.34■□□□□ 0.05
CLPX-203ENST00000558958 CALHM1Q8IU99 346 aa15.34■□□□□ 0.05
CLPX-203ENST00000558958 PNLDC1Q8NA58 520 aaKnown RBP15.34■□□□□ 0.05
CLPX-203ENST00000558958 AP3S1Q92572 193 aa15.34■□□□□ 0.05
CLPX-203ENST00000558958 KCTD12Q96CX2 325 aaKnown RBP15.34■□□□□ 0.05
CLPX-203ENST00000558958 NXF2Q9GZY0 626 aaKnown RBP15.34■□□□□ 0.05
CLPX-203ENST00000558958 CLEC4MQ9H2X3 399 aaPredicted RBP15.34■□□□□ 0.05
CLPX-203ENST00000558958 MS4A5Q9H3V2 200 aa15.34■□□□□ 0.05
CLPX-203ENST00000558958 UBTD1Q9HAC8 227 aa15.34■□□□□ 0.05
CLPX-203ENST00000558958 LIN7BQ9HAP6 207 aa15.34■□□□□ 0.05
CLPX-203ENST00000558958 DYNLRB1Q9NP97 96 aa15.34■□□□□ 0.05
CLPX-203ENST00000558958 CBLN4Q9NTU7 201 aa15.34■□□□□ 0.05
CLPX-203ENST00000558958 A0A0B4J203 849 aa15.33■□□□□ 0.05
CLPX-203ENST00000558958 LRP5LA4QPB2 252 aa15.33■□□□□ 0.05
CLPX-203ENST00000558958 PTBP3O95758 552 aaKnown RBP15.33■□□□□ 0.05
CLPX-203ENST00000558958 SOD3P08294 240 aa15.33■□□□□ 0.05
CLPX-203ENST00000558958 TNFSF4P23510 183 aa15.33■□□□□ 0.05
CLPX-203ENST00000558958 ZNF154Q13106 437 aa15.33■□□□□ 0.05
CLPX-203ENST00000558958 P2RY14Q15391 338 aa15.33■□□□□ 0.05
CLPX-203ENST00000558958 ZNF404Q494X3 552 aa15.33■□□□□ 0.05
CLPX-203ENST00000558958 C11orf71Q6IPW1 123 aa15.33■□□□□ 0.05
CLPX-203ENST00000558958 ZNF295-AS1Q8N0V1 137 aa15.33■□□□□ 0.05
CLPX-203ENST00000558958 ZCCHC24Q8N2G6 241 aaKnown RBP15.33■□□□□ 0.05
CLPX-203ENST00000558958 CELF2-AS1Q8N7Q2 184 aa15.33■□□□□ 0.05
CLPX-203ENST00000558958 TNFAIP8L1Q8WVP5 186 aa15.33■□□□□ 0.05
CLPX-203ENST00000558958 PLEKHF2Q9H8W4 249 aa15.33■□□□□ 0.05
CLPX-203ENST00000558958 IL19Q9UHD0 177 aa15.33■□□□□ 0.05
CLPX-203ENST00000558958 MRPS28Q9Y2Q9 187 aaKnown RBP15.33■□□□□ 0.05
CLPX-203ENST00000558958 A3GALT2U3KPV4 340 aa15.33■□□□□ 0.05
CLPX-203ENST00000558958 DOPEY2Q9Y3R5 2298 aa15.33■□□□□ 0.04
CLPX-203ENST00000558958 A0A075B6Q4 140 aa15.33■□□□□ 0.04
CLPX-203ENST00000558958 PAHP00439 452 aa15.33■□□□□ 0.04
CLPX-203ENST00000558958 PLATP00750 562 aa15.33■□□□□ 0.04
CLPX-203ENST00000558958 GRPP07492 148 aa15.33■□□□□ 0.04
CLPX-203ENST00000558958 CD55P08174 381 aa15.33■□□□□ 0.04
CLPX-203ENST00000558958 MPZP25189 248 aa15.33■□□□□ 0.04
CLPX-203ENST00000558958 POU3F4P49335 361 aa15.33■□□□□ 0.04
CLPX-203ENST00000558958 SRP9P49458 86 aaKnown RBP15.33■□□□□ 0.04
CLPX-203ENST00000558958 DYNC1I2Q13409 638 aaKnown RBP15.33■□□□□ 0.04
CLPX-203ENST00000558958 AWAT2Q6E213 333 aa15.33■□□□□ 0.04
CLPX-203ENST00000558958 HAGHLQ6PII5 290 aaPredicted RBP15.33■□□□□ 0.04
CLPX-203ENST00000558958 C1QL2Q7Z5L3 287 aa15.33■□□□□ 0.04
CLPX-203ENST00000558958 MCFD2Q8NI22 146 aa15.33■□□□□ 0.04
CLPX-203ENST00000558958 ACOT12Q8WYK0 555 aa15.33■□□□□ 0.04
CLPX-203ENST00000558958 FAM3DQ96BQ1 224 aa15.33■□□□□ 0.04
CLPX-203ENST00000558958 MEGF10Q96KG7 1140 aa15.33■□□□□ 0.04
CLPX-203ENST00000558958 C1orf147Q96MC9 270 aaPredicted RBP15.33■□□□□ 0.04
CLPX-203ENST00000558958 OR2V2Q96R30 315 aa15.33■□□□□ 0.04
CLPX-203ENST00000558958 MRI1Q9BV20 369 aa15.33■□□□□ 0.04
CLPX-203ENST00000558958 TLNRD1Q9H1K6 362 aa15.33■□□□□ 0.04
CLPX-203ENST00000558958 ABRACLQ9P1F3 81 aa15.33■□□□□ 0.04
CLPX-203ENST00000558958 FBXO9Q9UK97 447 aaPredicted RBP15.33■□□□□ 0.04
CLPX-203ENST00000558958 CRYBG3Q68DQ2 2970 aa15.32■□□□□ 0.04
CLPX-203ENST00000558958 ARFGEF3Q5TH69 2177 aa15.32■□□□□ 0.04
CLPX-203ENST00000558958 IGHV3-64DA0A0J9YX35 117 aa15.32■□□□□ 0.04
CLPX-203ENST00000558958 SPRY1O43609 319 aaPredicted RBP15.32■□□□□ 0.04
CLPX-203ENST00000558958 TMEM225BP0DP42 221 aa15.32■□□□□ 0.04
CLPX-203ENST00000558958 CALCBP10092 127 aa15.32■□□□□ 0.04
CLPX-203ENST00000558958 SNRPBP14678 240 aaKnown RBP15.32■□□□□ 0.04
CLPX-203ENST00000558958 RANBP1P43487 201 aa15.32■□□□□ 0.04
CLPX-203ENST00000558958 PPOXP50336 477 aa15.32■□□□□ 0.04
CLPX-203ENST00000558958 TNFAIP6P98066 277 aaPredicted RBP15.32■□□□□ 0.04
CLPX-203ENST00000558958 SPRNQ5BIV9 151 aa15.32■□□□□ 0.04
CLPX-203ENST00000558958 FAM209AQ5JX71 171 aa15.32■□□□□ 0.04
CLPX-203ENST00000558958 PRAMEF6Q5VXH4 476 aa15.32■□□□□ 0.04
CLPX-203ENST00000558958 GLIPR1L1Q6UWM5 242 aa15.32■□□□□ 0.04
CLPX-203ENST00000558958 ASCL4Q6XD76 172 aa15.32■□□□□ 0.04
CLPX-203ENST00000558958 ZSCAN4Q8NAM6 433 aaPredicted RBP15.32■□□□□ 0.04
CLPX-203ENST00000558958 SCCPDHQ8NBX0 429 aa15.32■□□□□ 0.04
CLPX-203ENST00000558958 PXT1Q8NFP0 134 aa15.32■□□□□ 0.04
CLPX-203ENST00000558958 OR51D1Q8NGF3 324 aa15.32■□□□□ 0.04
CLPX-203ENST00000558958 ZNF671Q8TAW3 534 aa15.32■□□□□ 0.04
CLPX-203ENST00000558958 TBC1D15Q8TC07 691 aa15.32■□□□□ 0.04
CLPX-203ENST00000558958 ITLN1Q8WWA0 313 aa15.32■□□□□ 0.04
CLPX-203ENST00000558958 AQP3Q92482 292 aa15.32■□□□□ 0.04
CLPX-203ENST00000558958 TRAF4Q9BUZ4 470 aaPredicted RBP15.32■□□□□ 0.04
CLPX-203ENST00000558958 PKIBQ9C010 78 aa15.32■□□□□ 0.04
CLPX-203ENST00000558958 MMP27Q9H306 513 aa15.32■□□□□ 0.04
CLPX-203ENST00000558958 OR5V1Q9UGF6 321 aa15.32■□□□□ 0.04
CLPX-203ENST00000558958 RAI1Q7Z5J4 1906 aaPredicted RBP15.32■□□□□ 0.04
CLPX-203ENST00000558958 J3QT63 122 aa15.31■□□□□ 0.04
CLPX-203ENST00000558958 ANGPTL7O43827 346 aa15.31■□□□□ 0.04
CLPX-203ENST00000558958 BPNT1O95861 308 aa15.31■□□□□ 0.04
CLPX-203ENST00000558958 ARSBP15848 533 aa15.31■□□□□ 0.04
CLPX-203ENST00000558958 GATA4P43694 442 aa15.31■□□□□ 0.04
CLPX-203ENST00000558958 CAPZA1P52907 286 aa15.31■□□□□ 0.04
CLPX-203ENST00000558958 SCAND1P57086 179 aa15.31■□□□□ 0.04
CLPX-203ENST00000558958 IL24Q13007 206 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms