RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 PLBD1Q6P4A8 553 aa12.87□□□□□ -0.35
RAB40C-202ENST00000509637 SHFQ7M4L6 423 aa12.87□□□□□ -0.35
RAB40C-202ENST00000509637 ZDHHC23Q8IYP9 409 aa12.87□□□□□ -0.35
RAB40C-202ENST00000509637 TMEM185AQ8NFB2 350 aa12.87□□□□□ -0.35
RAB40C-202ENST00000509637 OR4M1Q8NGD0 313 aa12.87□□□□□ -0.35
RAB40C-202ENST00000509637 OR51G2Q8NGK0 314 aa12.87□□□□□ -0.35
RAB40C-202ENST00000509637 OR2T29Q8NH02 315 aa12.87□□□□□ -0.35
RAB40C-202ENST00000509637 OTULINQ96BN8 352 aa12.87□□□□□ -0.35
RAB40C-202ENST00000509637 FEVQ99581 238 aa12.87□□□□□ -0.35
RAB40C-202ENST00000509637 RGCCQ9H4X1 137 aa12.87□□□□□ -0.35
RAB40C-202ENST00000509637 FAM206AQ9NX38 181 aa12.87□□□□□ -0.35
RAB40C-202ENST00000509637 TAGLN3Q9UI15 199 aa12.87□□□□□ -0.35
RAB40C-202ENST00000509637 SAMHD1Q9Y3Z3 626 aaKnown RBP12.87□□□□□ -0.35
RAB40C-202ENST00000509637 LRP12Q9Y561 859 aa12.87□□□□□ -0.35
RAB40C-202ENST00000509637 MEX3AA1L020 520 aaKnown RBP12.86□□□□□ -0.35
RAB40C-202ENST00000509637 RFPL4AA6NLU0 287 aa12.86□□□□□ -0.35
RAB40C-202ENST00000509637 RFPL4AL1F8VTS6 287 aa12.86□□□□□ -0.35
RAB40C-202ENST00000509637 H0YAE9 185 aa12.86□□□□□ -0.35
RAB40C-202ENST00000509637 LYNP07948 512 aa12.86□□□□□ -0.35
RAB40C-202ENST00000509637 ZNF3P17036 446 aa12.86□□□□□ -0.35
RAB40C-202ENST00000509637 BLVRAP53004 296 aa12.86□□□□□ -0.35
RAB40C-202ENST00000509637 PSMA6P60900 246 aaKnown RBP12.86□□□□□ -0.35
RAB40C-202ENST00000509637 NSUN5P1Q3KNT7 163 aa12.86□□□□□ -0.35
RAB40C-202ENST00000509637 ACP7Q6ZNF0 438 aa12.86□□□□□ -0.35
RAB40C-202ENST00000509637 HS3ST5Q8IZT8 346 aa12.86□□□□□ -0.35
RAB40C-202ENST00000509637 BATF2Q8N1L9 274 aa12.86□□□□□ -0.35
RAB40C-202ENST00000509637 Q8N2B8 174 aa12.86□□□□□ -0.35
RAB40C-202ENST00000509637 OR10G2Q8NGC3 310 aa12.86□□□□□ -0.35
RAB40C-202ENST00000509637 OR5K1Q8NHB7 308 aa12.86□□□□□ -0.35
RAB40C-202ENST00000509637 IFNGP01579 166 aa12.85□□□□□ -0.35
RAB40C-202ENST00000509637 APOC1P02654 83 aa12.85□□□□□ -0.35
RAB40C-202ENST00000509637 COX7A1P24310 79 aa12.85□□□□□ -0.35
RAB40C-202ENST00000509637 GINS1Q14691 196 aa12.85□□□□□ -0.35
RAB40C-202ENST00000509637 CEACAM21Q3KPI0 293 aa12.85□□□□□ -0.35
RAB40C-202ENST00000509637 PLA1AQ53H76 456 aa12.85□□□□□ -0.35
RAB40C-202ENST00000509637 TMEM236Q5W0B7 351 aa12.85□□□□□ -0.35
RAB40C-202ENST00000509637 HAGHLQ6PII5 290 aaPredicted RBP12.85□□□□□ -0.35
RAB40C-202ENST00000509637 MOB3CQ70IA8 216 aa12.85□□□□□ -0.35
RAB40C-202ENST00000509637 CPOQ8IVL8 374 aa12.85□□□□□ -0.35
RAB40C-202ENST00000509637 TEAD3Q99594 435 aa12.85□□□□□ -0.35
RAB40C-202ENST00000509637 CITED2Q99967 270 aaPredicted RBP12.85□□□□□ -0.35
RAB40C-202ENST00000509637 AURKAIP1Q9NWT8 199 aaPredicted RBP12.85□□□□□ -0.35
RAB40C-202ENST00000509637 COPS3Q9UNS2 423 aa12.85□□□□□ -0.35
RAB40C-202ENST00000509637 DSCAML1Q8TD84 2053 aa12.85□□□□□ -0.35
RAB40C-202ENST00000509637 TRBV23-1A0A0A0MS06 115 aa12.84□□□□□ -0.35
RAB40C-202ENST00000509637 A6NDX4 124 aa12.84□□□□□ -0.35
RAB40C-202ENST00000509637 MAGEB4O15481 346 aaPredicted RBP12.84□□□□□ -0.35
RAB40C-202ENST00000509637 FAHP16930 419 aa12.84□□□□□ -0.35
RAB40C-202ENST00000509637 GYS2P54840 703 aa12.84□□□□□ -0.35
RAB40C-202ENST00000509637 GNG3P63215 75 aa12.84□□□□□ -0.35
RAB40C-202ENST00000509637 MFGE8Q08431 387 aaPredicted RBP12.84□□□□□ -0.35
RAB40C-202ENST00000509637 AANATQ16613 207 aa12.84□□□□□ -0.35
RAB40C-202ENST00000509637 LCN8Q6JVE9 175 aa12.84□□□□□ -0.35
RAB40C-202ENST00000509637 ZNF782Q6ZMW2 699 aaPredicted RBP12.84□□□□□ -0.35
RAB40C-202ENST00000509637 THAP5Q7Z6K1 395 aa12.84□□□□□ -0.35
RAB40C-202ENST00000509637 TMEM219Q86XT9 240 aa12.84□□□□□ -0.35
RAB40C-202ENST00000509637 OR5D13Q8NGL4 314 aa12.84□□□□□ -0.35
RAB40C-202ENST00000509637 OR4C13Q8NGP0 309 aa12.84□□□□□ -0.35
RAB40C-202ENST00000509637 WNT10AQ9GZT5 417 aa12.84□□□□□ -0.35
RAB40C-202ENST00000509637 MAGIXQ9H6Y5 334 aa12.84□□□□□ -0.35
RAB40C-202ENST00000509637 RANBP3Q9H6Z4 567 aaPredicted RBP12.84□□□□□ -0.35
RAB40C-202ENST00000509637 CCDC182A6NF36 153 aa12.83□□□□□ -0.36
RAB40C-202ENST00000509637 F8VVB4 439 aa12.83□□□□□ -0.36
RAB40C-202ENST00000509637 F8VWA3 439 aa12.83□□□□□ -0.36
RAB40C-202ENST00000509637 PIN1P1O15428 100 aa12.83□□□□□ -0.36
RAB40C-202ENST00000509637 SRSF10O75494 262 aaKnown RBP12.83□□□□□ -0.36
RAB40C-202ENST00000509637 PRKACGP22612 351 aa12.83□□□□□ -0.36
RAB40C-202ENST00000509637 PRDX2P32119 198 aa12.83□□□□□ -0.36
RAB40C-202ENST00000509637 CDK5Q00535 292 aa12.83□□□□□ -0.36
RAB40C-202ENST00000509637 TMEM95Q3KNT9 176 aa12.83□□□□□ -0.36
RAB40C-202ENST00000509637 ZBTB37Q5TC79 503 aa12.83□□□□□ -0.36
RAB40C-202ENST00000509637 TCF23Q7RTU1 214 aa12.83□□□□□ -0.36
RAB40C-202ENST00000509637 PIGWQ7Z7B1 504 aa12.83□□□□□ -0.36
RAB40C-202ENST00000509637 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.83□□□□□ -0.36
RAB40C-202ENST00000509637 POC1AQ8NBT0 407 aa12.83□□□□□ -0.36
RAB40C-202ENST00000509637 OR5A2Q8NGI9 324 aa12.83□□□□□ -0.36
RAB40C-202ENST00000509637 OR2T27Q8NH04 317 aa12.83□□□□□ -0.36
RAB40C-202ENST00000509637 OR2T6Q8NHC8 308 aa12.83□□□□□ -0.36
RAB40C-202ENST00000509637 OR51E1Q8TCB6 317 aa12.83□□□□□ -0.36
RAB40C-202ENST00000509637 GIPC3Q8TF64 312 aa12.83□□□□□ -0.36
RAB40C-202ENST00000509637 OR8B4Q96RC9 309 aa12.83□□□□□ -0.36
RAB40C-202ENST00000509637 NKX3-1Q99801 234 aaPredicted RBP12.83□□□□□ -0.36
RAB40C-202ENST00000509637 CDCA4Q9BXL8 241 aa12.83□□□□□ -0.36
RAB40C-202ENST00000509637 TTTY10Q9BZA0 68 aa12.83□□□□□ -0.36
RAB40C-202ENST00000509637 REEP1Q9H902 201 aa12.83□□□□□ -0.36
RAB40C-202ENST00000509637 GPR84Q9NQS5 396 aa12.83□□□□□ -0.36
RAB40C-202ENST00000509637 A0A0U1RQV5 110 aa12.82□□□□□ -0.36
RAB40C-202ENST00000509637 A6NIN4 97 aa12.82□□□□□ -0.36
RAB40C-202ENST00000509637 C17orf98A8MV24 154 aa12.82□□□□□ -0.36
RAB40C-202ENST00000509637 VGLL3A8MV65 326 aa12.82□□□□□ -0.36
RAB40C-202ENST00000509637 ODF3BA8MYP8 253 aa12.82□□□□□ -0.36
RAB40C-202ENST00000509637 PRR23D1E9PI22 279 aaPredicted RBP12.82□□□□□ -0.36
RAB40C-202ENST00000509637 ALX3O95076 343 aa12.82□□□□□ -0.36
RAB40C-202ENST00000509637 PGA5P0DJD9 388 aa12.82□□□□□ -0.36
RAB40C-202ENST00000509637 PRR23D2P0DMB1 279 aaPredicted RBP12.82□□□□□ -0.36
RAB40C-202ENST00000509637 MAP2K3P46734 347 aa12.82□□□□□ -0.36
RAB40C-202ENST00000509637 RPL31P62899 125 aaKnown RBP12.82□□□□□ -0.36
RAB40C-202ENST00000509637 BLCAPP62952 87 aa12.82□□□□□ -0.36
RAB40C-202ENST00000509637 BLMHQ13867 455 aa12.82□□□□□ -0.36
RAB40C-202ENST00000509637 ADGRG5Q8IZF4 528 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms