RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, human

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRAPPC12-223	ENST00000497597	TBL1XR1	Q9BZK7	514 aa		9.41	□□□□□ -0.9
TRAPPC12-223	ENST00000497597	LMAN1L	Q9HAT1	526 aa		9.41	□□□□□ -0.9
TRAPPC12-223	ENST00000497597	PIAS3	Q9Y6X2	628 aa		9.41	□□□□□ -0.9
TRAPPC12-223	ENST00000497597	FAM230A	A0A1W2PPH8	454 aa		9.41	□□□□□ -0.9
TRAPPC12-223	ENST00000497597	LOC390937	A0A1W2PQ73	354 aa		9.41	□□□□□ -0.9
TRAPPC12-223	ENST00000497597	WIPF3	A6NGB9	483 aa		9.41	□□□□□ -0.9
TRAPPC12-223	ENST00000497597	DFFB	O76075	338 aa		9.41	□□□□□ -0.9
TRAPPC12-223	ENST00000497597	SFTPC	P11686	197 aa		9.41	□□□□□ -0.9
TRAPPC12-223	ENST00000497597	SLC25A1	P53007	311 aa		9.41	□□□□□ -0.9
TRAPPC12-223	ENST00000497597	RRAD	P55042	308 aa		9.41	□□□□□ -0.9
TRAPPC12-223	ENST00000497597	PIGP	P57054	158 aa		9.41	□□□□□ -0.9
TRAPPC12-223	ENST00000497597	NUTF2	P61970	127 aa	Known RBP	9.41	□□□□□ -0.9
TRAPPC12-223	ENST00000497597	SUPT4H1	P63272	117 aa	Known RBP	9.41	□□□□□ -0.9
TRAPPC12-223	ENST00000497597	TESK1	Q15569	626 aa		9.41	□□□□□ -0.9
TRAPPC12-223	ENST00000497597	ZNF658B	Q4V348	819 aa	Predicted RBP	9.41	□□□□□ -0.9
TRAPPC12-223	ENST00000497597	C2orf27A	Q580R0	203 aa		9.41	□□□□□ -0.9
TRAPPC12-223	ENST00000497597	HLA-DQA1	Q5Y7H0	255 aa		9.41	□□□□□ -0.9
TRAPPC12-223	ENST00000497597	ZNF283	Q8N7M2	679 aa		9.41	□□□□□ -0.9
TRAPPC12-223	ENST00000497597	C12orf76	Q8N812	135 aa	Predicted RBP	9.41	□□□□□ -0.9
TRAPPC12-223	ENST00000497597	BCORP1	Q8N888	145 aa		9.41	□□□□□ -0.9
TRAPPC12-223	ENST00000497597	OR52N5	Q8NH56	324 aa		9.41	□□□□□ -0.9
TRAPPC12-223	ENST00000497597	AQP3	Q92482	292 aa		9.41	□□□□□ -0.9
TRAPPC12-223	ENST00000497597	PIGT	Q969N2	578 aa		9.41	□□□□□ -0.9
TRAPPC12-223	ENST00000497597	GALNT14	Q96FL9	552 aa		9.41	□□□□□ -0.9
TRAPPC12-223	ENST00000497597	PLEKHJ1	Q9NW61	149 aa		9.41	□□□□□ -0.9
TRAPPC12-223	ENST00000497597	MMACHC	Q9Y4U1	282 aa		9.41	□□□□□ -0.9
TRAPPC12-223	ENST00000497597	TMEM184B	Q9Y519	407 aa	Predicted RBP	9.41	□□□□□ -0.9
TRAPPC12-223	ENST00000497597	CEP290	O15078	2479 aa		9.41	□□□□□ -0.9
TRAPPC12-223	ENST00000497597	MYO7B	Q6PIF6	2116 aa		9.41	□□□□□ -0.9
TRAPPC12-223	ENST00000497597	PRSS37	A4D1T9	235 aa		9.41	□□□□□ -0.9
TRAPPC12-223	ENST00000497597	CCDC85C	A6NKD9	419 aa		9.41	□□□□□ -0.9
TRAPPC12-223	ENST00000497597		K7EQS6	105 aa		9.41	□□□□□ -0.9
TRAPPC12-223	ENST00000497597	PHF1	O43189	567 aa	Predicted RBP	9.41	□□□□□ -0.9
TRAPPC12-223	ENST00000497597	CD33	P20138	364 aa		9.41	□□□□□ -0.9
TRAPPC12-223	ENST00000497597	NOVA1	P51513	510 aa	Known RBP	9.41	□□□□□ -0.9
TRAPPC12-223	ENST00000497597	PPP1CA	P62136	330 aa		9.41	□□□□□ -0.9
TRAPPC12-223	ENST00000497597	MPV17L	Q2QL34	196 aa		9.41	□□□□□ -0.9
TRAPPC12-223	ENST00000497597	OPN3	Q9H1Y3	402 aa	Predicted RBP	9.41	□□□□□ -0.9
TRAPPC12-223	ENST00000497597	WFDC1	Q9HC57	220 aa		9.41	□□□□□ -0.9
TRAPPC12-223	ENST00000497597	PRTFDC1	Q9NRG1	225 aa		9.41	□□□□□ -0.9
TRAPPC12-223	ENST00000497597	POMT1	Q9Y6A1	747 aa		9.41	□□□□□ -0.9
TRAPPC12-223	ENST00000497597	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	9.41	□□□□□ -0.9
TRAPPC12-223	ENST00000497597	HSPA12A	O43301	675 aa		9.4	□□□□□ -0.9
TRAPPC12-223	ENST00000497597	RAD51D	O75771	328 aa		9.4	□□□□□ -0.9
TRAPPC12-223	ENST00000497597	NKX2-2	O95096	273 aa		9.4	□□□□□ -0.9
TRAPPC12-223	ENST00000497597	NPS	P0C0P6	89 aa		9.4	□□□□□ -0.9
TRAPPC12-223	ENST00000497597	HLA-DOB	P13765	273 aa		9.4	□□□□□ -0.9
TRAPPC12-223	ENST00000497597	FUT3	P21217	361 aa		9.4	□□□□□ -0.9
TRAPPC12-223	ENST00000497597	FPR2	P25090	351 aa		9.4	□□□□□ -0.9
TRAPPC12-223	ENST00000497597	HSD17B7	P56937	341 aa		9.4	□□□□□ -0.9
TRAPPC12-223	ENST00000497597	SCAND1	P57086	179 aa		9.4	□□□□□ -0.9
TRAPPC12-223	ENST00000497597	H3F3A	P84243	136 aa		9.4	□□□□□ -0.9
TRAPPC12-223	ENST00000497597	POU3F1	Q03052	451 aa	Predicted RBP	9.4	□□□□□ -0.9
TRAPPC12-223	ENST00000497597	RPS4Y2	Q8TD47	263 aa		9.4	□□□□□ -0.9
TRAPPC12-223	ENST00000497597	NXF5	Q9H1B4	397 aa	Known RBP	9.4	□□□□□ -0.9
TRAPPC12-223	ENST00000497597	SLC5A6	Q9Y289	635 aa		9.4	□□□□□ -0.9
TRAPPC12-223	ENST00000497597	SDK2	Q58EX2	2172 aa		9.4	□□□□□ -0.9
TRAPPC12-223	ENST00000497597	CABIN1	Q9Y6J0	2220 aa		9.4	□□□□□ -0.9
TRAPPC12-223	ENST00000497597	COL4A3	Q01955	1670 aa		9.4	□□□□□ -0.9
TRAPPC12-223	ENST00000497597	PHF3	Q92576	2039 aa	Known RBP	9.4	□□□□□ -0.9
TRAPPC12-223	ENST00000497597	DOCK11	Q5JSL3	2073 aa		9.4	□□□□□ -0.9
TRAPPC12-223	ENST00000497597	CEBPZOS	A8MTT3	80 aa		9.4	□□□□□ -0.9
TRAPPC12-223	ENST00000497597	FTCDNL1	E5RQL4	147 aa		9.4	□□□□□ -0.9
TRAPPC12-223	ENST00000497597		M0R143	59 aa		9.4	□□□□□ -0.9
TRAPPC12-223	ENST00000497597	OR5AC1	P0C628	307 aa		9.4	□□□□□ -0.9
TRAPPC12-223	ENST00000497597	PNMT	P11086	282 aa		9.4	□□□□□ -0.9
TRAPPC12-223	ENST00000497597	HIST1H1D	P16402	221 aa	Known RBP	9.4	□□□□□ -0.9
TRAPPC12-223	ENST00000497597	HLA-G	P17693	338 aa		9.4	□□□□□ -0.9
TRAPPC12-223	ENST00000497597	TMEM268	Q5VZI3	342 aa		9.4	□□□□□ -0.9
TRAPPC12-223	ENST00000497597	CMTM1	Q8IZ96	169 aa		9.4	□□□□□ -0.9
TRAPPC12-223	ENST00000497597	SLC22A18	Q96BI1	424 aa		9.4	□□□□□ -0.9
TRAPPC12-223	ENST00000497597	RPUSD4	Q96CM3	377 aa	Known RBP	9.4	□□□□□ -0.9
TRAPPC12-223	ENST00000497597	MVB12A	Q96EY5	273 aa		9.4	□□□□□ -0.9
TRAPPC12-223	ENST00000497597	MMAB	Q96EY8	250 aa	Predicted RBP	9.4	□□□□□ -0.9
TRAPPC12-223	ENST00000497597	MYOZ1	Q9NP98	299 aa	Predicted RBP	9.4	□□□□□ -0.9
TRAPPC12-223	ENST00000497597	PRODH2	Q9UF12	536 aa		9.4	□□□□□ -0.9
TRAPPC12-223	ENST00000497597	STARD10	Q9Y365	291 aa		9.4	□□□□□ -0.9
TRAPPC12-223	ENST00000497597	SCN10A	Q9Y5Y9	1956 aa		9.4	□□□□□ -0.9
TRAPPC12-223	ENST00000497597	COL4A4	P53420	1690 aa	Predicted RBP	9.4	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	ZNF264	O43296	627 aa		9.4	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	SSSCA1	O60232	199 aa		9.4	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	ACR	P10323	421 aa		9.4	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	GP1BB	P13224	206 aa		9.4	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	RPS4Y1	P22090	263 aa	Known RBP	9.4	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	IL12B	P29460	328 aa		9.4	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	CD200	P41217	278 aa		9.4	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	DEFB103A	P81534	67 aa		9.4	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	OR5I1	Q13606	314 aa		9.4	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	COL13A1	Q5TAT6	717 aa	Predicted RBP	9.4	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	RTL6	Q6ICC9	239 aa		9.4	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	FAHD2B	Q6P2I3	314 aa	Predicted RBP	9.4	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	NPSR1	Q6W5P4	371 aa		9.4	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	DNM1P46	Q6ZS02	220 aa		9.4	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	FAM57B	Q71RH2	274 aa		9.4	□□□□□ -0.91
TRAPPC12-223	ENST00000497597		Q7L0L9	218 aa		9.4	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	C6orf201	Q7Z4U5	140 aa		9.4	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	SLC39A11	Q8N1S5	342 aa		9.4	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	ABHD5	Q8WTS1	349 aa		9.4	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	FAHD2A	Q96GK7	314 aa		9.4	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	SLC25A31	Q9H0C2	315 aa		9.4	□□□□□ -0.91

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